Clone FI07216 Report

Search the DGRC for FI07216

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:72
Well:16
Vector:pFlc-1
Associated Gene/TranscriptCG13875-RA
Protein status:FI07216.pep: gold
Sequenced Size:1990

Clone Sequence Records

FI07216.complete Sequence

1990 bp assembled on 2009-01-06

GenBank Submission: BT056261.1

> FI07216.complete
AGTTGTGGCGAAGATACCGAGCGCGCTGGTAAGGCACGGTTCGCATCGAA
AACTTTAAACTGTCTTCGGTCGGGCCAGTGGAACGCGAGAAAGTTAAAAT
TGTAACAATAAAGACACTCATAATAGCGCTCCGTGAGTAACTTAGTGTTT
ACATGAAGAAGGCTGATTCTAGTTCATCACTGGTCCAATCGAAGCGCCAT
ACACAAGTTACCACAGATTTTTCATAACTAGCTAATGACCGAAATTGACA
CGTTCTGACGGCCGCAGCCGATGAGAGGACCTTATTCTAAAGAAGAACTG
TTAACTAATTGTCAGCTCTGCTTACAAGCGGTTAGGTTGCATAAATTACA
CCAAATGAGCACTAGCTTACACAATAACCAGTAAAGGCTTCGGGATGCAG
AGCCTACCACTACCAGGAGATGAAGCCATAGGCTTGCTACCCTCTCAGTC
AGAAAGCTTTTCCATTTGGGTCAACGGCGAGGAGCACTGGATATCCGGTG
CGGACTCAAGCACCACCTGCGCAGATCTAATATGCGCGTTAATCAGCTAC
CAAATAGACCAGAAACATGTGCTCAGCAAGGAAGAAATACTCGCTCCACA
GCAATTTGCTATTGTCCAAAAGCAGCGTCACTACGAGGAGTATTTGGATA
GTAGTGCCAGGCTCCTTGATGTTATAACCAGCCCTCACGCAATGCCGAAA
GAGGAATACCAGCTACATCTTCGTCACTTGGCCACTTCAAGTCGAAAGCA
AGTCCCGACGACCGATAAGGACAGTGGAATGGGCAGTCCAGTAGATAGTT
CGCGGAGCATGCGCATCCGGCGGAGGGGCAAGCTTCTCTCCACTAAGACC
ACAGACAATATCAACACTAAGCAGTCGAAGAGAAGCCGGAAGCAGCAGCA
GAGGAACCACCACTTAACTCCGAACGAGAGCCTGCTTACCATTATCCTTG
CCCAAGATGAAACCATTCTGCAGCAAATGACCATGTTGCACGAAAAGGAT
CGACAGATTTTTAAAATCGAGGAGGAGAAGCACCAGGTGAGGGAGCGAGA
GCTGGGTAAAAACTACCTCCTTGAGACGTACTTAAAGGACTTGGATGAGC
CCCAAGAAAAGGGCGAAGACCTGGAACTGTTTGAAGAAATGACACACATA
GACGTAGATCGAGACTTTGGTATAATGTCAGATAGTACCGTCCAAACTGC
GTTAAATAGTGGCACTATGCAGGACGACATCCGGCTTTACTGGCTGGAAA
AGATTCACGAGGTAAACAAAGAGCTGCAATGTGAAGAGGAACTTTTACTC
AGCCTGCACTCCAAGGTACGTAGACACCAGGTGAAGCGGGCGTACCAAAC
GAAGAGCGAGGTGCTACTACAAATCGAAAGACTCGATACAGAGTTGGCTA
CTCAGGTGGCGGATATCCACCATGTGGAACGAAAACTTTTCACGGCCAAT
GAACAGCTTAAAGCCAAACTGGCTGTTCTTGAATGTTTGAGTCGTGAATT
TGAGACTACAGTATCTGGAGGCGTTCAAGAAGGTGATGTTGCCACTGGCA
GCAATGCAAGTGCAAAGGTTCAGCAAAGCCAATCAGATGATCTCCAACAC
GCTGGGAACTGGCTGCACGTTGTTAAGAGACTCTTTGCGGCAGATCATCT
TAATCGGCGATTAACGCAACAGGCACTAAGTGAAAAGAACTTAACGGATC
GACTAATACCCAGCAAAGGAATATCCAAGCAGATGTTCGAAGTTCTAAGA
TCCCCAGATCCTTCTACCTCGAACAGCGTAAACAAAAAAGAGTTGAGTAC
TAGGCAAGCAATTTCTTTAGAAAGGGATATTCAACACCTCGGCACCCTTG
TTTAATGCAAAGATCAAGCAGTTGACTTAATCCAAGTATCTCATGTAACG
TATTTTGAACATCCGTACCAAATTTGTGTCAATTAACCAAATAGAGATTA
AATTTTTGTTATGTTTAAAACTCGAAAAAAAAAAAAAAAA

FI07216.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:44:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG13875-RA 2068 CG13875-RA 96..2066 1..1972 9820 99.9 Plus
CG13875.b 1749 CG13875.b 133..1747 358..1972 8075 100 Plus
CG13875.a 1686 CG13875.a 70..1684 358..1972 8075 100 Plus
CG13875.b 1749 CG13875.b 1..132 1..132 660 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 16:21:45
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 181703..182495 1180..1972 3965 100 Plus
chr3L 24539361 chr3L 180701..181050 357..706 1750 100 Plus
chr3L 24539361 chr3L 180256..180611 1..357 1735 99.7 Plus
chr3L 24539361 chr3L 181110..181393 707..990 1420 100 Plus
chr3L 24539361 chr3L 181452..181642 991..1181 955 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:18:05 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 16:21:43
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 181741..182533 1180..1972 3965 100 Plus
3L 28110227 3L 180739..181088 357..706 1750 100 Plus
3L 28110227 3L 180294..180649 1..357 1735 99.7 Plus
3L 28110227 3L 181148..181431 707..990 1420 100 Plus
3L 28110227 3L 181490..181680 991..1181 955 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:41:51
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 181741..182533 1180..1972 3965 100 Plus
3L 28103327 3L 180739..181088 357..706 1750 100 Plus
3L 28103327 3L 180294..180649 1..357 1745 99.7 Plus
3L 28103327 3L 181148..181431 707..990 1420 100 Plus
3L 28103327 3L 181490..181680 991..1181 955 100 Plus
Blast to na_te.dros performed on 2019-03-15 16:21:43 has no hits.

FI07216.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 16:22:55 Download gff for FI07216.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 180256..180611 1..357 99 -> Plus
chr3L 180702..181050 358..706 100 -> Plus
chr3L 181110..181393 707..990 100 -> Plus
chr3L 181452..181642 991..1181 100 -> Plus
chr3L 181705..182497 1182..1974 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 17:50:15 Download gff for FI07216.complete
Subject Subject Range Query Range Percent Splice Strand
CG13875-RA 1..1461 395..1855 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:22:39 Download gff for FI07216.complete
Subject Subject Range Query Range Percent Splice Strand
CG13875-RA 1..1461 395..1855 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:14:02 Download gff for FI07216.complete
Subject Subject Range Query Range Percent Splice Strand
CG13875-RA 1..1461 395..1855 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:34:24 Download gff for FI07216.complete
Subject Subject Range Query Range Percent Splice Strand
CG13875-RA 1..1461 395..1855 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-01-06 14:22:08 Download gff for FI07216.complete
Subject Subject Range Query Range Percent Splice Strand
CG13875-RA 1..1973 1..1974 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:22:39 Download gff for FI07216.complete
Subject Subject Range Query Range Percent Splice Strand
CG13875-RA 1..1973 1..1974 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:14:02 Download gff for FI07216.complete
Subject Subject Range Query Range Percent Splice Strand
CG13875-RA 3..1975 1..1974 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:34:24 Download gff for FI07216.complete
Subject Subject Range Query Range Percent Splice Strand
CG13875-RA 3..1975 1..1974 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 16:22:55 Download gff for FI07216.complete
Subject Subject Range Query Range Percent Splice Strand
3L 181490..181680 991..1181 100 -> Plus
3L 181148..181431 707..990 100 -> Plus
3L 180294..180649 1..357 99 -> Plus
3L 180740..181088 358..706 100 -> Plus
3L 181743..182535 1182..1974 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 16:22:55 Download gff for FI07216.complete
Subject Subject Range Query Range Percent Splice Strand
3L 181490..181680 991..1181 100 -> Plus
3L 181148..181431 707..990 100 -> Plus
3L 180294..180649 1..357 99 -> Plus
3L 180740..181088 358..706 100 -> Plus
3L 181743..182535 1182..1974 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 16:22:55 Download gff for FI07216.complete
Subject Subject Range Query Range Percent Splice Strand
3L 181490..181680 991..1181 100 -> Plus
3L 181148..181431 707..990 100 -> Plus
3L 180294..180649 1..357 99 -> Plus
3L 180740..181088 358..706 100 -> Plus
3L 181743..182535 1182..1974 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:14:02 Download gff for FI07216.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 181490..181680 991..1181 100 -> Plus
arm_3L 180294..180649 1..357 99 -> Plus
arm_3L 180740..181088 358..706 100 -> Plus
arm_3L 181148..181431 707..990 100 -> Plus
arm_3L 181743..182535 1182..1974 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:10:24 Download gff for FI07216.complete
Subject Subject Range Query Range Percent Splice Strand
3L 180294..180649 1..357 99 -> Plus
3L 180740..181088 358..706 100 -> Plus
3L 181148..181431 707..990 100 -> Plus
3L 181490..181680 991..1181 100 -> Plus
3L 181743..182535 1182..1974 99   Plus

FI07216.hyp Sequence

Translation from 394 to 1854

> FI07216.hyp
MQSLPLPGDEAIGLLPSQSESFSIWVNGEEHWISGADSSTTCADLICALI
SYQIDQKHVLSKEEILAPQQFAIVQKQRHYEEYLDSSARLLDVITSPHAM
PKEEYQLHLRHLATSSRKQVPTTDKDSGMGSPVDSSRSMRIRRRGKLLST
KTTDNINTKQSKRSRKQQQRNHHLTPNESLLTIILAQDETILQQMTMLHE
KDRQIFKIEEEKHQVRERELGKNYLLETYLKDLDEPQEKGEDLELFEEMT
HIDVDRDFGIMSDSTVQTALNSGTMQDDIRLYWLEKIHEVNKELQCEEEL
LLSLHSKVRRHQVKRAYQTKSEVLLQIERLDTELATQVADIHHVERKLFT
ANEQLKAKLAVLECLSREFETTVSGGVQEGDVATGSNASAKVQQSQSDDL
QHAGNWLHVVKRLFAADHLNRRLTQQALSEKNLTDRLIPSKGISKQMFEV
LRSPDPSTSNSVNKKELSTRQAISLERDIQHLGTLV*

FI07216.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:29:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG13875-PB 486 CG13875-PB 1..486 1..486 2464 100 Plus
CG13875-PA 486 CG13875-PA 1..486 1..486 2464 100 Plus

FI07216.pep Sequence

Translation from 394 to 1854

> FI07216.pep
MQSLPLPGDEAIGLLPSQSESFSIWVNGEEHWISGADSSTTCADLICALI
SYQIDQKHVLSKEEILAPQQFAIVQKQRHYEEYLDSSARLLDVITSPHAM
PKEEYQLHLRHLATSSRKQVPTTDKDSGMGSPVDSSRSMRIRRRGKLLST
KTTDNINTKQSKRSRKQQQRNHHLTPNESLLTIILAQDETILQQMTMLHE
KDRQIFKIEEEKHQVRERELGKNYLLETYLKDLDEPQEKGEDLELFEEMT
HIDVDRDFGIMSDSTVQTALNSGTMQDDIRLYWLEKIHEVNKELQCEEEL
LLSLHSKVRRHQVKRAYQTKSEVLLQIERLDTELATQVADIHHVERKLFT
ANEQLKAKLAVLECLSREFETTVSGGVQEGDVATGSNASAKVQQSQSDDL
QHAGNWLHVVKRLFAADHLNRRLTQQALSEKNLTDRLIPSKGISKQMFEV
LRSPDPSTSNSVNKKELSTRQAISLERDIQHLGTLV*

FI07216.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 13:11:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF24858-PA 522 GF24858-PA 35..522 15..486 1132 53.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 13:11:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG14696-PA 512 GG14696-PA 8..512 1..486 1972 79.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 13:11:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH15751-PA 526 GH15751-PA 41..526 19..486 630 35.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:32:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG13875-PB 486 CG13875-PB 1..486 1..486 2464 100 Plus
CG13875-PA 486 CG13875-PA 1..486 1..486 2464 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 13:11:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI12531-PA 536 GI12531-PA 54..536 20..486 596 35.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 13:11:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL16152-PA 572 GL16152-PA 16..572 2..486 1266 54.4 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 13:11:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA12591-PA 572 GA12591-PA 16..572 2..486 1251 54.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 13:11:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM14312-PA 397 GM14312-PA 8..390 1..382 1667 91.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 13:11:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD13549-PA 397 GD13549-PA 8..390 1..382 1671 91.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 13:11:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ17121-PA 492 GJ17121-PA 33..428 55..448 550 37.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 13:11:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK12495-PA 258 GK12495-PA 95..248 194..373 368 45.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 13:11:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE21059-PA 509 GE21059-PA 8..509 1..486 1848 77.9 Plus