Clone FI07225 Report

Search the DGRC for FI07225

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:72
Well:25
Vector:pFlc-1
Associated Gene/TranscriptSki6-RA
Protein status:FI07225.pep: gold
Sequenced Size:923

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
Ski6 2008-08-15 Release 5.9 accounting
Ski6 2008-12-18 5.12 accounting

Clone Sequence Records

FI07225.complete Sequence

923 bp assembled on 2008-07-29

GenBank Submission: BT044317.1

> FI07225.complete
GGTGGTAAAATTGTAAACAAATCCCGCCGCACGTGTGATATTTAGTTAAA
ATCAAAATAATTGTATTTCTAAAGTTTCAAAATATGTCTGGTAAATACGA
TCTGCTCAGTGAGCAGGGCCTCCGTCTGGACGGACGACGTCCTCATGAAT
TGCGCCGCATCAAGTGCAAACTGGGAGTCTTCGAGCAGCCCGATGGAAGT
GCCTACATGGAGCAGGGAAACACCAAGGTTCTGGCTGCCGTCTATGGACC
CCACCAGGCCAAGGGCAATCAGACAGAGTCCGTCATCAACTGTCAGTACA
GTCAGGCAACCTTCTCCACGGCGGAGCGCAAAAATAGGCCGCGCGGCGAT
CGCAAATCTCTGGAGTTCAAGTTGTACCTGCAGCAGGCGCTAAGTGCTGC
CATTAAATCAGAACTATATCCCCGCTCCCAGATAGACATATACGTGGAGG
TGCTCCAAGACGACGGCGCCAACTATGCGGTGGCTCTTAATGCCGCCACA
CTGGCGCTAATTGATGCGGGAATCTGCCTCAATGAGTTCATTGTCGCCTG
CACCGCCTCACTGAGCAAATCGAACATCCCGCTCACAGACATCTCTCAGT
TCGAGGAGGTATCCGGCGGACCGAAGCTAACCGTGGCTGCCTTGCCTACC
GCCGAGAAAATCGCCTTTCTTGAGATGAGTGAGCGGTTCCACATCGATCA
CTTGGAAACCGTCATCGAGACTGCTATGGCGGGTTGCCGCGAAATAAGGG
ACATTCTGGAGGCAGCAGTCAAGGAGCACCTTCTGCACATGGGCAGTGCC
TCTGACTTTGCGAAAGTTGGTTGAAATAAAGTAATCTTTTCTATTCCAAT
CTTGTCGTTTTTTACAATTGAAGGGCAACAATTATAATAAAAGGAACCAA
CATTTACAAAAAAAAAAAAAAAA

FI07225.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:05:14
Subject Length Description Subject Range Query Range Score Percent Strand
Ski6-RA 922 Ski6-RA 17..922 6..910 4475 99.7 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 23:14:43
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 13220073..13220975 907..6 4450 99.8 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:18:09 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 23:14:41
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 13221394..13222299 910..6 4465 99.8 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:23:33
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 13221394..13222299 910..6 4475 99.7 Minus
Blast to na_te.dros performed on 2019-03-15 23:14:41 has no hits.

FI07225.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 23:15:31 Download gff for FI07225.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 13220073..13220980 1..907 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:55:11 Download gff for FI07225.complete
Subject Subject Range Query Range Percent Splice Strand
Ski6-RA 1..741 84..824 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:07:31 Download gff for FI07225.complete
Subject Subject Range Query Range Percent Splice Strand
Ski6-RA 1..741 84..824 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:34:26 Download gff for FI07225.complete
Subject Subject Range Query Range Percent Splice Strand
Ski6-RA 1..741 84..824 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-09-08 12:18:34 Download gff for FI07225.complete
Subject Subject Range Query Range Percent Splice Strand
Ski6-RA 1..741 84..824 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:25:46 Download gff for FI07225.complete
Subject Subject Range Query Range Percent Splice Strand
Ski6-RA 1..741 84..824 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:32:44 Download gff for FI07225.complete
Subject Subject Range Query Range Percent Splice Strand
Ski6-RA 12..919 1..907 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:07:31 Download gff for FI07225.complete
Subject Subject Range Query Range Percent Splice Strand
Ski6-RA 12..919 1..907 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:34:26 Download gff for FI07225.complete
Subject Subject Range Query Range Percent Splice Strand
Ski6-RA 4..911 1..907 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-29 09:20:26 Download gff for FI07225.complete
Subject Subject Range Query Range Percent Splice Strand
Ski6-RA 12..919 1..907 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:25:46 Download gff for FI07225.complete
Subject Subject Range Query Range Percent Splice Strand
Ski6-RA 4..911 1..907 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:15:31 Download gff for FI07225.complete
Subject Subject Range Query Range Percent Splice Strand
2L 13221397..13222304 1..907 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:15:31 Download gff for FI07225.complete
Subject Subject Range Query Range Percent Splice Strand
2L 13221397..13222304 1..907 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:15:31 Download gff for FI07225.complete
Subject Subject Range Query Range Percent Splice Strand
2L 13221397..13222304 1..907 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:34:26 Download gff for FI07225.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 13221397..13222304 1..907 99   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:36:49 Download gff for FI07225.complete
Subject Subject Range Query Range Percent Splice Strand
2L 13221397..13222304 1..907 99   Minus

FI07225.hyp Sequence

Translation from 83 to 823

> FI07225.hyp
MSGKYDLLSEQGLRLDGRRPHELRRIKCKLGVFEQPDGSAYMEQGNTKVL
AAVYGPHQAKGNQTESVINCQYSQATFSTAERKNRPRGDRKSLEFKLYLQ
QALSAAIKSELYPRSQIDIYVEVLQDDGANYAVALNAATLALIDAGICLN
EFIVACTASLSKSNIPLTDISQFEEVSGGPKLTVAALPTAEKIAFLEMSE
RFHIDHLETVIETAMAGCREIRDILEAAVKEHLLHMGSASDFAKVG*

FI07225.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:29:51
Subject Length Description Subject Range Query Range Score Percent Strand
Ski6-PB 246 CG15481-PB 1..246 1..246 1244 100 Plus
Ski6-PA 246 CG15481-PA 1..246 1..246 1244 100 Plus
Mtr3-PA 326 CG8025-PA 33..201 11..176 191 31.4 Plus
Rrp46-PA 233 CG4043-PA 13..206 22..221 150 23.8 Plus

FI07225.pep Sequence

Translation from 83 to 823

> FI07225.pep
MSGKYDLLSEQGLRLDGRRPHELRRIKCKLGVFEQPDGSAYMEQGNTKVL
AAVYGPHQAKGNQTESVINCQYSQATFSTAERKNRPRGDRKSLEFKLYLQ
QALSAAIKSELYPRSQIDIYVEVLQDDGANYAVALNAATLALIDAGICLN
EFIVACTASLSKSNIPLTDISQFEEVSGGPKLTVAALPTAEKIAFLEMSE
RFHIDHLETVIETAMAGCREIRDILEAAVKEHLLHMGSASDFAKVG*

FI07225.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 18:19:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF15621-PA 249 GF15621-PA 1..248 1..245 1185 89.1 Plus
Dana\GF10840-PA 325 GF10840-PA 48..201 24..176 207 34.4 Plus
Dana\GF17467-PA 234 GF17467-PA 13..134 22..149 153 30.6 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 18:19:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG10219-PA 246 GG10219-PA 1..245 1..245 1253 95.9 Plus
Dere\GG13362-PA 319 GG13362-PA 46..272 22..232 171 26.1 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 18:19:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH10637-PA 249 GH10637-PA 1..248 1..245 1180 88.3 Plus
Dgri\GH16904-PA 331 GH16904-PA 37..199 19..176 181 30.7 Plus
Dgri\GH18468-PA 235 GH18468-PA 13..134 22..149 165 34.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:30:49
Subject Length Description Subject Range Query Range Score Percent Strand
Ski6-PB 246 CG15481-PB 1..246 1..246 1244 100 Plus
Ski6-PA 246 CG15481-PA 1..246 1..246 1244 100 Plus
Mtr3-PA 326 CG8025-PA 33..201 11..176 191 31.4 Plus
Rrp46-PA 233 CG4043-PA 13..206 22..221 150 23.8 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 18:19:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI10716-PA 249 GI10716-PA 1..248 1..245 1172 87.9 Plus
Dmoj\GI13661-PA 329 GI13661-PA 53..199 31..176 177 31.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 18:19:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL26697-PA 249 GL26697-PA 1..249 1..246 1190 89.2 Plus
Dper\GL22907-PA 328 GL22907-PA 33..198 11..176 209 32.4 Plus
Dper\GL23700-PA 234 GL23700-PA 14..135 22..149 150 32.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 18:19:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA13761-PA 249 GA13761-PA 1..249 1..246 1190 89.2 Plus
Dpse\GA20773-PA 328 GA20773-PA 33..198 11..176 209 32.4 Plus
Dpse\GA17911-PA 234 GA17911-PA 14..135 22..149 151 32.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 18:19:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM25757-PA 246 GM25757-PA 1..246 1..246 1306 99.2 Plus
Dsec\GM15571-PA 327 GM15571-PA 39..201 17..176 180 30.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 18:19:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD11973-PA 49 GD11973-PA 1..49 198..246 251 98 Plus
Dsim\GD12240-PA 327 GD12240-PA 39..201 17..176 186 31.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 18:19:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ18275-PA 249 GJ18275-PA 1..248 1..245 1176 87.9 Plus
Dvir\GJ13996-PA 329 GJ13996-PA 51..199 29..176 178 32.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 18:19:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK15569-PA 251 GK15569-PA 1..250 1..245 1193 89.2 Plus
Dwil\GK17502-PA 326 GK17502-PA 51..199 29..176 190 30.3 Plus
Dwil\GK11547-PA 237 GK11547-PA 9..134 17..147 163 31.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 18:19:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE11809-PA 246 GE11809-PA 1..245 1..245 1272 97.1 Plus
Dyak\GE23007-PA 328 GE23007-PA 39..201 17..176 179 30.1 Plus
Dyak\GE22455-PA 328 GE22455-PA 39..201 17..176 179 30.1 Plus