Clone FI07227 Report

Search the DGRC for FI07227

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:72
Well:27
Vector:pFlc-1
Associated Gene/TranscriptCG4573-RA
Protein status:FI07227.pep: gold
Sequenced Size:1703

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG4573 2008-12-18 5.12 accounting

Clone Sequence Records

FI07227.complete Sequence

1703 bp assembled on 2008-08-25

GenBank Submission: BT044318.1

> FI07227.complete
GTTCGGGGTAAACAAAAAACCGGCATAGGAATTTTATTTCTAAAATACAT
AAATATGTTAAAGATAAATCCGCGAATGCTGATGCAACAGTGCCTGCGCC
ACGCCCACAGCCAGGTGCGCGTCCGCTTCGCCCCAAGTCCCACGGGTTAC
CTGCATTTGGGCGGTCTGCGCACAGCCCTGTACAATTTCCTGTACGCCAG
GCATTTGGGCGGAAAATTCCTGTTGCGGATCGAGGACACGGATCAAACTC
GACTAGTGCCCGGTGCCAGTGAACGACTGGTGGAGGATCTGCTCTGGGCA
GGCATAGAAATTGACGAGGGACCCGGTTTTGGCGGTCAACTGGGACCCTA
TGTGCAGAGTCAGCGAACGGAAATTTACAGCAAAGCCATTGAAGAACTGC
TCCATAATGGCACCGCGTACAGATGCTTTTGCACCGAACGCCGTCTGGAT
TTGTTGCGTAAGGAGGCGCTGAGAACCCGGCAAGTTCCACGCTATGATAA
CAAGTGCCGACATCTAACGACTTCGGAAGTGGATTCCCTACTGGCCAAGG
GTACACCCTACTGCATACGATTCAAGCTGACGGATCACGAGGAGCCACTG
GATGATCTCATCTACGGCAAGGTGCATCACAATGTCAGCGACAACGAAGG
CGATCCAGTGGTCATGAAGAGCGATCAATTTCCCACCTATCACTTTGCCA
ACGTGGTGGACGACCATTTGATGGGCATCACCCACGTCCTGAGGGGCGTG
GAGTGGCAGATATCCACCACCAAGCATTTGCTGCTCTACAAAGCTTTTGG
CTGGCAGCCCCCTAAATTTGGTCACCTGCCGCTTTTGGTGAATGCAGATG
GCACCAAGCTAAGCAAACGTCAAGGAGACATTGGCATTCAGCACTTTCGG
GAACGCGGCTACTTTCCGCAGGCTTTAGTGAACTATGTGGTTTCTGCAGG
CGGAGGATTCGAGCATCGTACCAATGCCAAGCAGCAGCTGCTCAGCATGC
AGGCGCTCCATGAGCAGTTTCACATAGAGCGCGTCAACTCCCATCCGAGT
CGCCTTAATCCCGAACTGCTCGATGATCTAAATCGCCTGGAGATTGTGCA
GCGTTTGTCTGGGAATGAGAGTCGTACGAAATTGGTCAATGAAGTGCAAC
AGCTGGTGAAAGAAGCCTATCCGCAACACTCCAACTTAGATCTAGCCGAG
GAGCACATATTGGATGTGCTGAATTGGTCATCAAAGCGCTTAACACTGCT
CCAAGATTTGACCAGCAGCAAACTGAGTTTCCTGTGGGTGAAACCCAGCG
ATTTTCAAATTAAAGACCTGACCGCAGAGCAACTAGCTCACTTGCTGCAG
TTAATCAACGCTATCCAGGACTTTCACAAGGATGAACTCAACGTTAAGCT
TAAATCCTTTGCTCAAAAAGAAAACATCAAATTCCCACTAATGATGAAAA
CACTAAGAGCAGCCCTAAGTGGCCTAAAAGAAGGTCCTGGCGTAGCGGAA
ATGATGGAGATCCTAGGCAAATCCGTCACTCTCGAACGACTCAAAGAAGC
TCTGCCCAAGGAAAGTCTGCATTTAGAAGAACATCAGTGATTTGGTTAAG
TTCTGTTGTATTTGTATGTATATATAATAGATTAATTTATATATTGATAA
CTTTTGCAATTTGAGAATAAGATCAATGAGTAGACACCAAAAAAAAAAAA
AAA

FI07227.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:07:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG4573-RA 1701 CG4573-RA 13..1701 1..1689 8430 99.9 Plus
TMS1.e 1828 TMS1.e 1660..1828 1689..1521 845 100 Minus
TMS1.d 1840 TMS1.d 1672..1840 1689..1521 845 100 Minus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 16:56:53
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 16405071..16405586 1688..1179 2425 98.4 Minus
chr3L 24539361 chr3L 16406100..16406513 791..378 1980 98.6 Minus
chr3L 24539361 chr3L 16405647..16406033 1178..792 1920 99.7 Minus
chr3L 24539361 chr3L 16406571..16406950 380..1 1885 99.7 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:18:10 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 16:56:51
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 16415291..16415801 1689..1179 2555 100 Minus
3L 28110227 3L 16416315..16416728 791..378 2070 100 Minus
3L 28110227 3L 16415862..16416248 1178..792 1935 100 Minus
3L 28110227 3L 16416786..16417165 380..1 1885 99.7 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:25:52
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 16408391..16408901 1689..1179 2555 100 Minus
3L 28103327 3L 16409415..16409828 791..378 2070 100 Minus
3L 28103327 3L 16408962..16409348 1178..792 1935 100 Minus
3L 28103327 3L 16409886..16410265 380..1 1885 99.7 Minus
Blast to na_te.dros performed on 2019-03-16 16:56:51 has no hits.

FI07227.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 16:57:39 Download gff for FI07227.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 16405071..16405586 1179..1688 98 <- Minus
chr3L 16405647..16406033 792..1178 99 <- Minus
chr3L 16406100..16406510 381..791 98 <- Minus
chr3L 16406571..16406950 1..380 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:55:12 Download gff for FI07227.complete
Subject Subject Range Query Range Percent Splice Strand
CG4573-RA 1..1536 55..1590 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:11:12 Download gff for FI07227.complete
Subject Subject Range Query Range Percent Splice Strand
CG4573-RA 1..1536 55..1590 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:27:04 Download gff for FI07227.complete
Subject Subject Range Query Range Percent Splice Strand
CG4573-RA 1..1536 55..1590 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-09-08 12:19:44 Download gff for FI07227.complete
Subject Subject Range Query Range Percent Splice Strand
CG4573-RA 1..1536 55..1590 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 12:48:38 Download gff for FI07227.complete
Subject Subject Range Query Range Percent Splice Strand
CG4573-RA 1..1536 55..1590 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:08:12 Download gff for FI07227.complete
Subject Subject Range Query Range Percent Splice Strand
CG4573-RA 1..1688 1..1688 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:11:12 Download gff for FI07227.complete
Subject Subject Range Query Range Percent Splice Strand
CG4573-RA 1..1688 1..1688 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:27:04 Download gff for FI07227.complete
Subject Subject Range Query Range Percent Splice Strand
CG4573-RA 13..1700 1..1688 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-25 10:59:03 Download gff for FI07227.complete
Subject Subject Range Query Range Percent Splice Strand
CG4573-RA 1..1688 1..1688 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 12:48:38 Download gff for FI07227.complete
Subject Subject Range Query Range Percent Splice Strand
CG4573-RA 13..1700 1..1688 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:57:39 Download gff for FI07227.complete
Subject Subject Range Query Range Percent Splice Strand
3L 16415292..16415801 1179..1688 100 <- Minus
3L 16415862..16416248 792..1178 100 <- Minus
3L 16416315..16416725 381..791 100 <- Minus
3L 16416786..16417165 1..380 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:57:39 Download gff for FI07227.complete
Subject Subject Range Query Range Percent Splice Strand
3L 16415292..16415801 1179..1688 100 <- Minus
3L 16415862..16416248 792..1178 100 <- Minus
3L 16416315..16416725 381..791 100 <- Minus
3L 16416786..16417165 1..380 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:57:39 Download gff for FI07227.complete
Subject Subject Range Query Range Percent Splice Strand
3L 16415292..16415801 1179..1688 100 <- Minus
3L 16415862..16416248 792..1178 100 <- Minus
3L 16416315..16416725 381..791 100 <- Minus
3L 16416786..16417165 1..380 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:27:04 Download gff for FI07227.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 16408392..16408901 1179..1688 100 <- Minus
arm_3L 16408962..16409348 792..1178 100 <- Minus
arm_3L 16409415..16409825 381..791 100 <- Minus
arm_3L 16409886..16410265 1..380 99   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:41:26 Download gff for FI07227.complete
Subject Subject Range Query Range Percent Splice Strand
3L 16408392..16408901 1179..1688 100 <- Minus
3L 16408962..16409348 792..1178 100 <- Minus
3L 16409415..16409825 381..791 100 <- Minus
3L 16409886..16410265 1..380 99   Minus

FI07227.pep Sequence

Translation from 0 to 1589

> FI07227.pep
VRGKQKTGIGILFLKYINMLKINPRMLMQQCLRHAHSQVRVRFAPSPTGY
LHLGGLRTALYNFLYARHLGGKFLLRIEDTDQTRLVPGASERLVEDLLWA
GIEIDEGPGFGGQLGPYVQSQRTEIYSKAIEELLHNGTAYRCFCTERRLD
LLRKEALRTRQVPRYDNKCRHLTTSEVDSLLAKGTPYCIRFKLTDHEEPL
DDLIYGKVHHNVSDNEGDPVVMKSDQFPTYHFANVVDDHLMGITHVLRGV
EWQISTTKHLLLYKAFGWQPPKFGHLPLLVNADGTKLSKRQGDIGIQHFR
ERGYFPQALVNYVVSAGGGFEHRTNAKQQLLSMQALHEQFHIERVNSHPS
RLNPELLDDLNRLEIVQRLSGNESRTKLVNEVQQLVKEAYPQHSNLDLAE
EHILDVLNWSSKRLTLLQDLTSSKLSFLWVKPSDFQIKDLTAEQLAHLLQ
LINAIQDFHKDELNVKLKSFAQKENIKFPLMMKTLRAALSGLKEGPGVAE
MMEILGKSVTLERLKEALPKESLHLEEHQ*

FI07227.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 12:25:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF10210-PA 515 GF10210-PA 1..513 19..527 2204 82.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 12:25:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG13451-PA 511 GG13451-PA 1..511 19..529 2552 93.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 12:25:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH15589-PA 516 GH15589-PA 1..515 19..529 2052 73.3 Plus
Dgri\GH23578-PA 1706 GH23578-PA 200..440 38..291 160 26.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:11:52
Subject Length Description Subject Range Query Range Score Percent Strand
GluRS-m-PA 511 CG4573-PA 1..511 19..529 2669 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 12:25:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI16866-PA 514 GI16866-PA 1..504 19..518 2002 74.2 Plus
Dmoj\GI23457-PA 1709 GI23457-PA 198..438 38..291 160 26.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 12:25:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL17994-PA 516 GL17994-PA 1..510 19..524 2269 82.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 12:25:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA18268-PA 516 GA18268-PA 1..509 19..523 2277 82.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 12:25:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM24401-PA 511 GM24401-PA 1..511 19..529 2564 95.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 12:25:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD12470-PA 511 GD12470-PA 1..511 19..529 2665 97.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 12:25:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ12616-PA 516 GJ12616-PA 1..506 19..520 1990 73.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 12:25:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK17488-PA 527 GK17488-PA 32..527 37..525 2015 74.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 12:25:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE23000-PA 511 GE23000-PA 1..511 19..529 2538 92.8 Plus
Dyak\GE22553-PA 511 GE22553-PA 1..511 19..529 2533 92.6 Plus

FI07227.hyp Sequence

Translation from 1 to 1589

> FI07227.hyp
VWGKQKTGIGILFLKYINMLKINPRMLMQQCLRHAHSQVRVRFAPSPTGY
LHLGGLRTALYNFLYARHLGGKFLLRIEDTDQTRLVPGASERLVEDLLWA
GIEIDEGPGFGGQLGPYVQSQRTEIYSKAIEELLHNGTAYRCFCTERRLD
LLRKEALRTRQVPRYDNKCRHLTTSEVDSLLAKGTPYCIRFKLTDHEEPL
DDLIYGKVHHNVSDNEGDPVVMKSDQFPTYHFANVVDDHLMGITHVLRGV
EWQISTTKHLLLYKAFGWQPPKFGHLPLLVNADGTKLSKRQGDIGIQHFR
ERGYFPQALVNYVVSAGGGFEHRTNAKQQLLSMQALHEQFHIERVNSHPS
RLNPELLDDLNRLEIVQRLSGNESRTKLVNEVQQLVKEAYPQHSNLDLAE
EHILDVLNWSSKRLTLLQDLTSSKLSFLWVKPSDFQIKDLTAEQLAHLLQ
LINAIQDFHKDELNVKLKSFAQKENIKFPLMMKTLRAALSGLKEGPGVAE
MMEILGKSVTLERLKEALPKESLHLEEHQ*

FI07227.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:29:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG4573-PA 511 CG4573-PA 1..511 19..529 2669 100 Plus