Clone FI07242 Report

Search the DGRC for FI07242

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:72
Well:42
Vector:pFlc-1
Associated Gene/TranscriptCG30001-RA
Protein status:FI07242.pep: gold
Sequenced Size:1306

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG30001 2008-12-18 5.12 accounting

Clone Sequence Records

FI07242.complete Sequence

1306 bp assembled on 2008-08-22

GenBank Submission: BT044322.1

> FI07242.complete
GTTCATTTTGAATGTTTTTATAATTGGAGGTTTTTATAATGGAATATGTG
CAGGAAAATAGAGGATTTACCAATATCGGCAATAGCTTTGGCTTCGTATG
CAGAATTATAGAAAAGCAATGCGGAATTCAACAATTGGGAGCTCTTGAAA
AATACGAATTTGCCGAGCTACTGAAGATTCTGAATGGCACAGAAAAGTTT
CTGGCCTCCAAGTTCTTCTGCCAACTGCCAGCGAATGTCGGCAGTTTTCG
AGTTCTCCGACAGCTACAGGAACTTCGCATCCTGACGGCCACGCAGTACA
TCTTTAGCAAGGAGGACTCCGATCAACTGCAGGTGGACCTGATCATATTC
CTGGAATCTGAGTTCGAACTTCTCGCAAATGTTTTCTTTTCAGCGGCTTA
CGATGCTGAATCTGCGTTGAAGCTAACCTTGATACTGACAAGCGCTTTGG
GGAATCTCTATTCCGGCCTCGTTGGCAATCCCAAGATATGCAGCTTGGCA
TATGTGGAGTTCTTGTGCAAAACCCTGCCAGATGAAGCGCTAAATGTTTG
CATGAACATGCATTTAAGTACCCTGTTGGATCTTCACCGATCGGAGAATG
TAGACGAGGCATTCGCCAGCTTTAGCGCCTGGATAAATGAGGGCGTCGAC
GAACTAACCTTTGTAAAGCACCTTTGCGATAAGATGTTTGCTAGCCATCA
GCAGGCAGCCCTTCAATATCTATTCAAACAGTCAAACACGGAAAACTTTA
ATCAGTGGAAGTTCTATCTAATACTTGTGCAAACTATCGCAAGCGCAGCC
AATCCTGAAACCACCGCATACATTAAAAAGTATCTGAAAAATAGACTTCT
GCAAACTGCATCCACGGCTTCCCTGGGATCCTTGCTTCATTTGCTGCTGA
CTGCAAGGGCTGCTTGTGCCTCAACCATGGATGTTCGTGCTAATCTAGAC
AACTATGCGAAGTGGTACAAGCAGAACATTGGTGAAATGACGTACATATT
GGGCACGGAAAAGTTTCAGACAATCCTAAGGCTCTTGGAGGAGTCTTTAC
CATACGAAAAAGAGTTGCAATACCTGGAGATTCATGTGTCAATTGCCATT
TCACCTGGTGGGCGGCTGGTTCAGGCCTACAAAACTAAGTGCAGGGCTCA
TGCAGCTCAACTTAAATCGGTGGCAAAGCGAAAGGCTTCCACAGACTAGA
TGCAAGGTGGTGCTATTCAATAAATAAAATACTCAGGATACTCGCACTGA
ACACTGAAACTCATTAAAATGTATTATGCTCATGCTGTCACAAAAAAAAA
AAAAAA

FI07242.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:07:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG30001-RA 1411 CG30001-RA 116..1411 1..1296 6465 99.9 Plus
CG30001-RB 1147 CG30001-RB 116..943 1..828 4140 100 Plus
CG30001-RB 1147 CG30001-RB 1002..1147 829..974 730 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 18:39:51
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 5708922..5709172 1079..829 1255 100 Minus
chr2R 21145070 chr2R 5708655..5708866 1289..1078 1060 100 Minus
chr2R 21145070 chr2R 5709432..5709586 683..529 760 99.4 Minus
chr2R 21145070 chr2R 5709231..5709377 828..682 735 100 Minus
chr2R 21145070 chr2R 5709640..5709769 531..402 650 100 Minus
chr2R 21145070 chr2R 5709990..5710101 307..196 560 100 Minus
chr2R 21145070 chr2R 5710301..5710404 104..1 520 100 Minus
chr2R 21145070 chr2R 5709832..5709928 402..306 470 99 Minus
chr2R 21145070 chr2R 5710149..5710241 197..105 465 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:18:21 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 18:39:49
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 9821437..9821687 1079..829 1255 100 Minus
2R 25286936 2R 9821163..9821381 1296..1078 1080 99.5 Minus
2R 25286936 2R 9821947..9822101 683..529 775 100 Minus
2R 25286936 2R 9821746..9821892 828..682 735 100 Minus
2R 25286936 2R 9822155..9822284 531..402 650 100 Minus
2R 25286936 2R 9822505..9822616 307..196 560 100 Minus
2R 25286936 2R 9822816..9822919 104..1 520 100 Minus
2R 25286936 2R 9822347..9822443 402..306 485 100 Minus
2R 25286936 2R 9822664..9822756 197..105 465 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:25:43
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 9822636..9822886 1079..829 1255 100 Minus
2R 25260384 2R 9822362..9822580 1296..1078 1080 99.5 Minus
2R 25260384 2R 9823146..9823300 683..529 775 100 Minus
2R 25260384 2R 9822945..9823091 828..682 735 100 Minus
2R 25260384 2R 9823354..9823483 531..402 650 100 Minus
2R 25260384 2R 9823704..9823815 307..196 560 100 Minus
2R 25260384 2R 9824015..9824118 104..1 520 100 Minus
2R 25260384 2R 9823546..9823642 402..306 485 100 Minus
2R 25260384 2R 9823863..9823955 197..105 465 100 Minus
Blast to na_te.dros performed on 2019-03-15 18:39:49 has no hits.

FI07242.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 18:40:32 Download gff for FI07242.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 5709990..5710099 198..307 100 <- Minus
chr2R 5710149..5710241 105..197 100 <- Minus
chr2R 5710301..5710404 1..104 100   Minus
chr2R 5708653..5708864 1080..1291 99 <- Minus
chr2R 5708922..5709172 829..1079 100 <- Minus
chr2R 5709231..5709375 684..828 100 <- Minus
chr2R 5709432..5709583 532..683 99 <- Minus
chr2R 5709640..5709768 403..531 100 <- Minus
chr2R 5709832..5709926 308..402 98 <- Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:55:22 Download gff for FI07242.complete
Subject Subject Range Query Range Percent Splice Strand
CG30001-RA 1..1161 39..1199 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:11:01 Download gff for FI07242.complete
Subject Subject Range Query Range Percent Splice Strand
CG30001-RA 1..1161 39..1199 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:26:47 Download gff for FI07242.complete
Subject Subject Range Query Range Percent Splice Strand
CG30001-RA 1..1161 39..1199 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-09-08 12:19:40 Download gff for FI07242.complete
Subject Subject Range Query Range Percent Splice Strand
CG30001-RA 1..1161 39..1199 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:56:30 Download gff for FI07242.complete
Subject Subject Range Query Range Percent Splice Strand
CG30001-RA 1..1161 39..1199 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:07:58 Download gff for FI07242.complete
Subject Subject Range Query Range Percent Splice Strand
CG30001-RA 116..1405 1..1291 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:11:01 Download gff for FI07242.complete
Subject Subject Range Query Range Percent Splice Strand
CG30001-RA 116..1405 1..1291 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:26:47 Download gff for FI07242.complete
Subject Subject Range Query Range Percent Splice Strand
CG30001-RA 37..1326 1..1291 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-25 10:58:48 Download gff for FI07242.complete
Subject Subject Range Query Range Percent Splice Strand
CG30001-RA 116..1405 1..1291 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:56:30 Download gff for FI07242.complete
Subject Subject Range Query Range Percent Splice Strand
CG30001-RA 37..1326 1..1291 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:40:32 Download gff for FI07242.complete
Subject Subject Range Query Range Percent Splice Strand
2R 9821168..9821379 1080..1291 99 <- Minus
2R 9821437..9821687 829..1079 100 <- Minus
2R 9821746..9821890 684..828 100 <- Minus
2R 9821947..9822098 532..683 100 <- Minus
2R 9822155..9822283 403..531 100 <- Minus
2R 9822347..9822441 308..402 100 <- Minus
2R 9822505..9822614 198..307 100 <- Minus
2R 9822664..9822756 105..197 100 <- Minus
2R 9822816..9822919 1..104 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:40:32 Download gff for FI07242.complete
Subject Subject Range Query Range Percent Splice Strand
2R 9821168..9821379 1080..1291 99 <- Minus
2R 9821437..9821687 829..1079 100 <- Minus
2R 9821746..9821890 684..828 100 <- Minus
2R 9821947..9822098 532..683 100 <- Minus
2R 9822155..9822283 403..531 100 <- Minus
2R 9822347..9822441 308..402 100 <- Minus
2R 9822505..9822614 198..307 100 <- Minus
2R 9822664..9822756 105..197 100 <- Minus
2R 9822816..9822919 1..104 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:40:32 Download gff for FI07242.complete
Subject Subject Range Query Range Percent Splice Strand
2R 9821168..9821379 1080..1291 99 <- Minus
2R 9821437..9821687 829..1079 100 <- Minus
2R 9821746..9821890 684..828 100 <- Minus
2R 9821947..9822098 532..683 100 <- Minus
2R 9822155..9822283 403..531 100 <- Minus
2R 9822347..9822441 308..402 100 <- Minus
2R 9822505..9822614 198..307 100 <- Minus
2R 9822664..9822756 105..197 100 <- Minus
2R 9822816..9822919 1..104 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:26:47 Download gff for FI07242.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 5708673..5708884 1080..1291 99 <- Minus
arm_2R 5708942..5709192 829..1079 100 <- Minus
arm_2R 5709251..5709395 684..828 100 <- Minus
arm_2R 5709452..5709603 532..683 100 <- Minus
arm_2R 5709660..5709788 403..531 100 <- Minus
arm_2R 5709852..5709946 308..402 100 <- Minus
arm_2R 5710010..5710119 198..307 100 <- Minus
arm_2R 5710169..5710261 105..197 100 <- Minus
arm_2R 5710321..5710424 1..104 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:41:10 Download gff for FI07242.complete
Subject Subject Range Query Range Percent Splice Strand
2R 9822367..9822578 1080..1291 99 <- Minus
2R 9822636..9822886 829..1079 100 <- Minus
2R 9822945..9823089 684..828 100 <- Minus
2R 9823146..9823297 532..683 100 <- Minus
2R 9823354..9823482 403..531 100 <- Minus
2R 9823546..9823640 308..402 100 <- Minus
2R 9823704..9823813 198..307 100 <- Minus
2R 9823863..9823955 105..197 100 <- Minus
2R 9824015..9824118 1..104 100   Minus

FI07242.pep Sequence

Translation from 38 to 1198

> FI07242.pep
MEYVQENRGFTNIGNSFGFVCRIIEKQCGIQQLGALEKYEFAELLKILNG
TEKFLASKFFCQLPANVGSFRVLRQLQELRILTATQYIFSKEDSDQLQVD
LIIFLESEFELLANVFFSAAYDAESALKLTLILTSALGNLYSGLVGNPKI
CSLAYVEFLCKTLPDEALNVCMNMHLSTLLDLHRSENVDEAFASFSAWIN
EGVDELTFVKHLCDKMFASHQQAALQYLFKQSNTENFNQWKFYLILVQTI
ASAANPETTAYIKKYLKNRLLQTASTASLGSLLHLLLTARAACASTMDVR
ANLDNYAKWYKQNIGEMTYILGTEKFQTILRLLEESLPYEKELQYLEIHV
SIAISPGGRLVQAYKTKCRAHAAQLKSVAKRKASTD*

FI07242.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 12:26:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF11478-PA 385 GF11478-PA 10..384 10..384 1345 69.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 12:26:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG25262-PA 349 GG25262-PA 1..348 1..348 1660 89.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 12:26:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH21915-PA 378 GH21915-PA 4..375 12..382 1068 57.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:16:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG30001-PA 386 CG30001-PA 1..386 1..386 1960 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 12:26:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI19265-PA 380 GI19265-PA 4..374 12..381 1076 58 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 12:26:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL17396-PA 360 GL17396-PA 6..349 7..350 1191 69.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 12:26:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA15570-PA 377 GA15570-PA 3..376 7..380 1302 68.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 12:26:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM20579-PA 219 GM20579-PA 1..219 1..219 1077 92.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 12:26:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD10051-PA 219 GD10051-PA 1..219 1..219 1096 94.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 12:26:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ22141-PA 378 GJ22141-PA 4..375 12..382 1117 59.9 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 12:26:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK23201-PA 383 GK23201-PA 5..379 12..385 1204 60.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 12:26:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE22061-PA 386 GE22061-PA 1..386 1..386 1855 89.9 Plus

FI07242.hyp Sequence

Translation from 38 to 1198

> FI07242.hyp
MEYVQENRGFTNIGNSFGFVCRIIEKQCGIQQLGALEKYEFAELLKILNG
TEKFLASKFFCQLPANVGSFRVLRQLQELRILTATQYIFSKEDSDQLQVD
LIIFLESEFELLANVFFSAAYDAESALKLTLILTSALGNLYSGLVGNPKI
CSLAYVEFLCKTLPDEALNVCMNMHLSTLLDLHRSENVDEAFASFSAWIN
EGVDELTFVKHLCDKMFASHQQAALQYLFKQSNTENFNQWKFYLILVQTI
ASAANPETTAYIKKYLKNRLLQTASTASLGSLLHLLLTARAACASTMDVR
ANLDNYAKWYKQNIGEMTYILGTEKFQTILRLLEESLPYEKELQYLEIHV
SIAISPGGRLVQAYKTKCRAHAAQLKSVAKRKASTD*

FI07242.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:30:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG30001-PA 386 CG30001-PA 1..386 1..386 1960 100 Plus