Clone FI07243 Report

Search the DGRC for FI07243

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:72
Well:43
Vector:pFlc-1
Associated Gene/Transcriptobst-E-RB
Protein status:FI07243.pep: gold
Sequenced Size:994

Clone Sequence Records

FI07243.complete Sequence

994 bp assembled on 2009-10-06

GenBank Submission: BT099959.1

> FI07243.complete
TGAGTCGAAATTGTCAGCTCGTTGGCTGAGCATCGCAGTAGCTCTTCCTT
AGTTTAACTTTTAGTGATCACATTGCCATTCGAAAACAACAAGAGGATTT
AAACAAAATGGCTAAAATCTTAATCAGTGCTCTATTGTGCGTTGCCATGT
TTGGCTCAATGGCTCTTGGCTCGCCGGAATGCCCCACGCCCAATGGACGA
TTTGCATCGGGTGACCAGTGCGACTCTTACACAGAGTGTCAGGATGGTAC
TCCCGTGGAGAAGCTGTGTCCGGACGGCCTGCTCTTCCACCAGCGCACCA
AGGCGACCGGAGAGTGCACATACGCCCCGTACTCCACCTGCAAGGAGAGG
GCTCGCCTGCAGCCCGCCAACGGAACGGAGGAGTGTCCCCGCCAGTTCGG
CTTCTATCCGAACGGAGATGCGACCAAGTGCGGCGTCTATCGCAACTGCG
CCCACGGCGTGGCCAGCCTAACCAAGTGCCCCGAGGGCCTGGCGTTCAAC
GAGGAGACCTACCAGTGCGACTGGCCCGATCTAGTGGAAAGTTGCAACGC
CGAGGCGTACCTGGGCTTCAATTGCCCCGCCGCCGATTCCGCCGATGATA
GCGCTGCCGCCGCCGTGGATGTCAGCCCGGAGGGTGAGCTGCGCTACTAT
CGCCATCCCCAGACCTGCAAGAAGTACTTCGTGTGCGTCAACGGACATCC
GCGCCTGTACAACTGCGGCAAGTATCTGGCCTTCAACTCGCAGACGAAAC
TGTGCGACTTCTACAACAAGGTGCCCGAGTGCTATGCCCTGCTCAAGGAG
AAGCAGCGCCTGAAGGCGGAGAAGCAACAGCCCCAGGTGGCTCAGCCGGA
GGACTAGGCCCTTCGAGAAACCGATGGAATCTCAGAGGCTGCTACCCGTA
CACTTCCTGTGCAATAATTATTATGCTGTAGATATGTAACTGCTTATTGG
TTATGCAATGAATAAATAAGTAATCTATAACAAAAAAAAAAAAA

FI07243.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:53:16
Subject Length Description Subject Range Query Range Score Percent Strand
obst-E-RB 1157 obst-E-RB 134..1110 3..979 4885 100 Plus
obst-E.a 1957 obst-E.a 1142..1957 162..977 4080 100 Plus
obst-E.a 1957 obst-E.a 80..241 3..164 810 100 Plus
obst-E-RA 1146 obst-E-RA 175..336 3..164 810 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 20:40:54
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 5761626..5762443 979..162 4015 99.4 Minus
chr2L 23010047 chr2L 5765034..5765193 162..3 800 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:18:22 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 20:40:52
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 5762552..5763369 979..162 4090 100 Minus
2L 23513712 2L 5765961..5766120 162..3 800 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:49:48
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 5762552..5763369 979..162 4090 100 Minus
2L 23513712 2L 5765961..5766120 162..3 800 100 Minus
Blast to na_te.dros performed on 2019-03-16 20:40:52 has no hits.

FI07243.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 20:42:00 Download gff for FI07243.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 5761623..5762442 163..981 99 <- Minus
chr2L 5765034..5765193 1..162 98   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 17:56:51 Download gff for FI07243.complete
Subject Subject Range Query Range Percent Splice Strand
obst-E-RB 1..750 108..857 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:41:14 Download gff for FI07243.complete
Subject Subject Range Query Range Percent Splice Strand
obst-E-RB 1..750 108..857 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:12:53 Download gff for FI07243.complete
Subject Subject Range Query Range Percent Splice Strand
obst-E-RB 1..750 108..857 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:10:23 Download gff for FI07243.complete
Subject Subject Range Query Range Percent Splice Strand
obst-E-RB 1..750 108..857 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-06 14:14:57 Download gff for FI07243.complete
Subject Subject Range Query Range Percent Splice Strand
obst-E-RB 20..876 1..857 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:41:13 Download gff for FI07243.complete
Subject Subject Range Query Range Percent Splice Strand
obst-E-RB 20..997 1..978 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:12:53 Download gff for FI07243.complete
Subject Subject Range Query Range Percent Splice Strand
obst-E-RB 21..998 1..978 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:10:23 Download gff for FI07243.complete
Subject Subject Range Query Range Percent Splice Strand
obst-E-RB 21..998 1..978 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 20:42:00 Download gff for FI07243.complete
Subject Subject Range Query Range Percent Splice Strand
2L 5762549..5763368 163..981 99 <- Minus
2L 5765961..5766120 1..162 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 20:42:00 Download gff for FI07243.complete
Subject Subject Range Query Range Percent Splice Strand
2L 5762549..5763368 163..981 99 <- Minus
2L 5765961..5766120 1..162 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 20:42:00 Download gff for FI07243.complete
Subject Subject Range Query Range Percent Splice Strand
2L 5762549..5763368 163..981 99 <- Minus
2L 5765961..5766120 1..162 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:12:53 Download gff for FI07243.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 5762549..5763368 163..981 99 <- Minus
arm_2L 5765961..5766120 1..162 98   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:22:54 Download gff for FI07243.complete
Subject Subject Range Query Range Percent Splice Strand
2L 5762549..5763368 163..981 99 <- Minus
2L 5765961..5766120 1..162 98   Minus

FI07243.hyp Sequence

Translation from 107 to 856

> FI07243.hyp
MAKILISALLCVAMFGSMALGSPECPTPNGRFASGDQCDSYTECQDGTPV
EKLCPDGLLFHQRTKATGECTYAPYSTCKERARLQPANGTEECPRQFGFY
PNGDATKCGVYRNCAHGVASLTKCPEGLAFNEETYQCDWPDLVESCNAEA
YLGFNCPAADSADDSAAAAVDVSPEGELRYYRHPQTCKKYFVCVNGHPRL
YNCGKYLAFNSQTKLCDFYNKVPECYALLKEKQRLKAEKQQPQVAQPED*

FI07243.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:30:35
Subject Length Description Subject Range Query Range Score Percent Strand
obst-E-PB 249 CG11142-PB 1..249 1..249 1384 100 Plus
obst-E-PA 242 CG11142-PA 1..228 1..232 564 48.9 Plus
obst-A-PB 237 CG17052-PB 8..225 6..225 384 38.1 Plus
obst-A-PA 237 CG17052-PA 8..225 6..225 384 38.1 Plus
obst-B-PA 337 CG4778-PA 85..285 24..232 337 33.5 Plus

FI07243.pep Sequence

Translation from 107 to 856

> FI07243.pep
MAKILISALLCVAMFGSMALGSPECPTPNGRFASGDQCDSYTECQDGTPV
EKLCPDGLLFHQRTKATGECTYAPYSTCKERARLQPANGTEECPRQFGFY
PNGDATKCGVYRNCAHGVASLTKCPEGLAFNEETYQCDWPDLVESCNAEA
YLGFNCPAADSADDSAAAAVDVSPEGELRYYRHPQTCKKYFVCVNGHPRL
YNCGKYLAFNSQTKLCDFYNKVPECYALLKEKQRLKAEKQQPQVAQPED*

FI07243.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 14:26:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF14304-PA 237 GF14304-PA 9..235 20..247 1079 86.8 Plus
Dana\GF14303-PA 242 GF14303-PA 1..241 1..239 518 47.6 Plus
Dana\GF20239-PA 239 GF20239-PA 8..238 6..236 351 36.3 Plus
Dana\GF15739-PA 322 GF15739-PA 75..275 24..232 314 34.4 Plus
Dana\GF20240-PA 230 GF20240-PA 1..216 1..217 284 32.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 14:26:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG24283-PA 250 GG24283-PA 1..249 1..248 1286 97.2 Plus
Dere\GG19275-PA 237 GG19275-PA 8..231 6..231 350 36.6 Plus
Dere\GG10079-PA 333 GG10079-PA 85..285 24..232 309 33.5 Plus
Dere\GG19276-PA 230 GG19276-PA 1..216 1..217 289 32.5 Plus
Dere\GG10600-PA 258 GG10600-PA 1..234 1..238 278 32.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 14:26:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH10690-PA 237 GH10690-PA 1..234 10..246 1044 82.3 Plus
Dgri\GH10689-PA 249 GH10689-PA 1..227 1..232 524 47 Plus
Dgri\GH12617-PA 235 GH12617-PA 2..230 3..231 346 34.5 Plus
Dgri\GH11070-PA 313 GH11070-PA 67..267 24..232 315 34 Plus
Dgri\GH12618-PA 230 GH12618-PA 1..216 1..217 295 33.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:01:16
Subject Length Description Subject Range Query Range Score Percent Strand
obst-E-PB 249 CG11142-PB 1..249 1..249 1384 100 Plus
obst-E-PA 242 CG11142-PA 1..228 1..232 564 48.9 Plus
obst-A-PB 237 CG17052-PB 8..225 6..225 384 38.1 Plus
obst-A-PA 237 CG17052-PA 8..225 6..225 384 38.1 Plus
obst-B-PA 337 CG4778-PA 85..285 24..232 337 33.5 Plus
Peritrophin-A-PB 230 CG17058-PB 12..216 9..217 309 34.4 Plus
Peritrophin-A-PA 230 CG17058-PA 12..216 9..217 309 34.4 Plus
Gasp-PB 235 CG10287-PB 1..218 1..225 306 32.6 Plus
Gasp-PA 258 CG10287-PA 1..218 1..225 306 32.6 Plus
Peritrophin-A-PC 157 CG17058-PC 12..154 9..149 214 35.9 Plus
CG10725-PB 269 CG10725-PB 97..261 38..216 178 28.5 Plus
Muc68D-PB 1514 CG6004-PB 1242..1434 22..218 163 25.1 Plus
CG10154-PB 316 CG10154-PB 144..239 108..222 158 33 Plus
CG10154-PA 316 CG10154-PA 144..239 108..222 158 33 Plus
CG10140-PA 297 CG10140-PA 70..219 38..221 152 25 Plus
obst-B-PA 337 CG4778-PA 64..204 69..222 151 28 Plus
CG10725-PB 269 CG10725-PB 42..217 38..248 147 24.7 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 14:26:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI11221-PA 233 GI11221-PA 4..230 13..240 1080 87.3 Plus
Dmoj\GI11215-PA 247 GI11215-PA 1..228 1..232 512 46.8 Plus
Dmoj\GI11032-PA 247 GI11032-PA 8..231 6..231 356 37.1 Plus
Dmoj\GI17587-PA 316 GI17587-PA 65..267 22..232 320 34.1 Plus
Dmoj\GI11033-PA 230 GI11033-PA 6..216 1..217 282 32.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 14:26:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL19117-PA 227 GL19117-PA 3..224 18..240 1058 88.8 Plus
Dper\GL19116-PA 243 GL19116-PA 1..236 1..239 507 46.1 Plus
Dper\GL13082-PA 238 GL13082-PA 8..232 6..231 362 37.1 Plus
Dper\GL18956-PA 316 GL18956-PA 73..273 24..232 314 34 Plus
Dper\GL13083-PA 230 GL13083-PA 1..216 1..217 274 31.4 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 14:26:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA25356-PA 228 GA25356-PA 4..225 18..240 1059 89.2 Plus
Dpse\GA10790-PA 243 GA10790-PA 1..236 1..239 504 46.1 Plus
Dpse\GA14300-PA 238 GA14300-PA 8..232 6..231 362 37.1 Plus
Dpse\GA18424-PA 316 GA18424-PA 73..273 24..232 314 34 Plus
Dpse\GA14302-PA 230 GA14302-PA 1..216 1..217 282 31.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 14:26:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM17998-PA 242 GM17998-PA 1..241 1..239 521 48 Plus
Dsec\GM17999-PA 105 GM17999-PA 2..88 17..103 443 93.1 Plus
Dsec\GM17883-PA 334 GM17883-PA 85..285 24..232 309 33.5 Plus
Dsec\GM23015-PA 230 GM23015-PA 1..216 1..217 291 32.5 Plus
Dsec\GM10569-PA 258 GM10569-PA 1..234 1..238 279 32.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 14:26:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD22632-PA 249 GD22632-PA 1..248 1..248 1306 98.4 Plus
Dsim\GD23651-PA 334 GD23651-PA 85..285 24..232 309 33.5 Plus
Dsim\GD17481-PA 230 GD17481-PA 1..216 1..217 289 32.5 Plus
Dsim\GD19561-PA 258 GD19561-PA 1..234 1..238 274 32.1 Plus
Dsim\GD17480-PA 429 GD17480-PA 175..326 24..170 261 38.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 14:26:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ18329-PA 242 GJ18329-PA 13..239 19..246 1066 86.8 Plus
Dvir\GJ18328-PA 247 GJ18328-PA 1..228 1..232 508 46 Plus
Dvir\GJ15813-PA 237 GJ15813-PA 8..236 6..236 348 36.3 Plus
Dvir\GJ17929-PA 313 GJ17929-PA 65..267 22..232 320 34.1 Plus
Dvir\GJ15814-PA 230 GJ15814-PA 1..216 1..217 285 32.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 14:26:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK15421-PA 234 GK15421-PA 6..232 20..247 1052 84.6 Plus
Dwil\GK15420-PA 244 GK15420-PA 1..243 1..246 504 44.8 Plus
Dwil\GK25193-PA 233 GK25193-PA 2..232 3..233 332 33.8 Plus
Dwil\GK12722-PA 309 GK12722-PA 63..263 24..232 305 33.5 Plus
Dwil\GK25194-PA 233 GK25194-PA 7..219 1..217 281 32.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 14:26:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE18979-PA 249 GE18979-PA 1..248 1..248 1302 98 Plus
Dyak\GE17864-PA 237 GE17864-PA 8..231 6..231 351 36.6 Plus
Dyak\GE18893-PA 334 GE18893-PA 85..285 24..232 306 33 Plus
Dyak\GE17865-PA 230 GE17865-PA 1..216 1..217 289 32.5 Plus
Dyak\GE24117-PA 258 GE24117-PA 1..234 1..238 276 32.5 Plus