BDGP Sequence Production Resources |
Search the DGRC for FI07258
Library: | FI |
Tissue Source: | various Drosophila melanogaster |
Created by: | |
Date Registered: | 2005-11-08 |
Comments: | Drosophila melanogaster corrected cDNA clones |
Original Plate Number: | 72 |
Well: | 58 |
Vector: | pFlc-1 |
Associated Gene/Transcript | Shc-RA |
Protein status: | FI07258.pep: gold |
Sequenced Size: | 1625 |
Gene | Date | Evidence |
---|---|---|
Shc | 2008-12-18 | 5.12 accounting |
1625 bp assembled on 2008-08-22
GenBank Submission: BT044327.1
> FI07258.complete GAGTGCGGCCACACTTTCGCGAATACGGTCCCACCTTGAGTAATATCCGA ATTACTAATAACAAAGGCTTGCAGCCTACAGCTGCGGAAAAAGGACCAGC AAGAAGCCAAATCGCTGCCAAGCGCCCACAGCCACCGCACAAATGCCTAA GAATGGCGATGCCGGCAACCGGAGCGGTTCCGGGACAACCAGCGACGGCT GCATCTATCCGGACGACGTCATAATGGGCGTGGGTGTTGCATTCAACGTG CGGTACACGGGATGCGTTGAGGTCAAGACCTCAATGAAATCCCTGGACTT CGAGACCCGTACGCAGTTAGCGCGAGAGTGCATCAATCGAGTTTGCGAGG CGGCCGGTTTAAAGTCTGCTGGCAAGCGGAGATTAACCAACTTCATATCG GATCGACCCAGCATGCAGCACGCCGGCACCAACATCATCATTAATGTATC GAGCCGTGCTCTGTCGCTAAGCAACGTGGAAACGGGCGAGGTTATAGCCA ATCACAATATGCCGCGCATATCGTTCGCGTCCGGCGGTGACAATGACACC CTCGACTTCCTCGCCTACATAGCCAAGAATGAGGATGAATGGCGGGCATG TTATGTCCTGGAATGCGCTGGCGGCCAAAGCGAGGATCTAATAGTGACCA TTGGCAAGGCGTTTGCCTTGCGCTTCAACGCTCTCAGTAGGCTCAATGAT CCCTCGGCGGATTGTAACATCAATCAAAGCTGCAAGGAGAATGTGAAGGA GTACTACAACGATTTGCCAAACAAGCTGCCACCAGAAGTGCCGGAACCAC AACAACAGCAGGTGCAGCAACCTCTCCATCCGCATGCGCCTCGTGTGGCA CAACTGAATCTGAAGAAGCCTCGCGATCGCCTGAGCAGCAACCTCATCGA CCTCAACTCCCCGCCTCCCGATCAGACGACCAATAAGTTAGGCCACTTTG ATCCCCTCCAAGCGACCACAGCTGCCAATTCTGTTTTGCCCTCTGTTCGC GATGTGTTCGACGGACCGCAATGCCCGCTCACAGCGGAGGTGTGGTTCCA TGCGGGCATATCCAGACCAATATCGGAGCGTTTGCTGCAGCAGGACGGCG ACTTTCTGGTGCGCGAGTCACAGGGAAAGCGGGGCCAGTACGTACTAACC GGATTAGAGGGCAAGACGCCCAAGCATCTGCTTCTCATCGATCCCGAGGG CGTGGTCCGAACCAAAGATCGCATCTTCGACAGCATTAGCCATCTGATCA ACTACCACTGGGCACACGCGCTGCCCATCATTTCGGAGGATTCCGAGCTG GTCTTGCGTAATCCGGTGCGAAGACCCCAGCAGGATCAGGCTGCGTCGCC CATTACATCAGCATCTTCCTGAACCGGAGGGAACAATCATACGTATAGCT ACCACCCATCATATACATAACAAATAATTATATATACTGGCATCAGCGTA CACGATTAGATTTAAATATTGTGCACTCGTAGAATATCTTTTATATATCG TCTGTGTAAAAACGAACCCATATATTTATGGATTGAATATAAACATATTT ACAAATATGTGCATGTCTACAGTATTTTCCATTCGAATGCGAATAAAGAT GATAAACGGAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6765..6893 | 774..907 | 135 | 60 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6718..6863 | 769..910 | 135 | 58.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6741..6864 | 774..896 | 131 | 57.3 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2301..2379 | 761..839 | 125 | 62 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2368..2502 | 774..907 | 114 | 54.8 | Plus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2319..2424 | 800..907 | 112 | 58.7 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 9418914..9419238 | 1..324 | 99 | -> | Plus |
chr3L | 9419301..9420585 | 325..1609 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Shc-RA | 1..1230 | 143..1372 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Shc-RA | 1..1230 | 143..1372 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Shc-RA | 1..1230 | 143..1372 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Shc-RA | 1..1230 | 143..1372 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Shc-RA | 1..1230 | 143..1372 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Shc-RA | 1..1610 | 1..1609 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Shc-RA | 1..1610 | 1..1609 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Shc-RA | 1..1600 | 10..1609 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Shc-RA | 1..1610 | 1..1609 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Shc-RA | 1..1600 | 10..1609 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 9427000..9427324 | 1..324 | 99 | -> | Plus |
3L | 9427387..9428671 | 325..1609 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 9427000..9427324 | 1..324 | 99 | -> | Plus |
3L | 9427387..9428671 | 325..1609 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 9427000..9427324 | 1..324 | 99 | -> | Plus |
3L | 9427387..9428671 | 325..1609 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 9420100..9420424 | 1..324 | 99 | -> | Plus |
arm_3L | 9420487..9421771 | 325..1609 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 9420100..9420424 | 1..324 | 99 | -> | Plus |
3L | 9420487..9421771 | 325..1609 | 100 | Plus |
Translation from 142 to 1371
> FI07258.hyp MPKNGDAGNRSGSGTTSDGCIYPDDVIMGVGVAFNVRYTGCVEVKTSMKS LDFETRTQLARECINRVCEAAGLKSAGKRRLTNFISDRPSMQHAGTNIII NVSSRALSLSNVETGEVIANHNMPRISFASGGDNDTLDFLAYIAKNEDEW RACYVLECAGGQSEDLIVTIGKAFALRFNALSRLNDPSADCNINQSCKEN VKEYYNDLPNKLPPEVPEPQQQQVQQPLHPHAPRVAQLNLKKPRDRLSSN LIDLNSPPPDQTTNKLGHFDPLQATTAANSVLPSVRDVFDGPQCPLTAEV WFHAGISRPISERLLQQDGDFLVRESQGKRGQYVLTGLEGKTPKHLLLID PEGVVRTKDRIFDSISHLINYHWAHALPIISEDSELVLRNPVRRPQQDQA ASPITSASS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Shc-PA | 409 | CG3715-PA | 1..409 | 1..409 | 2142 | 100 | Plus |
Translation from 142 to 1371
> FI07258.pep MPKNGDAGNRSGSGTTSDGCIYPDDVIMGVGVAFNVRYTGCVEVKTSMKS LDFETRTQLARECINRVCEAAGLKSAGKRRLTNFISDRPSMQHAGTNIII NVSSRALSLSNVETGEVIANHNMPRISFASGGDNDTLDFLAYIAKNEDEW RACYVLECAGGQSEDLIVTIGKAFALRFNALSRLNDPSADCNINQSCKEN VKEYYNDLPNKLPPEVPEPQQQQVQQPLHPHAPRVAQLNLKKPRDRLSSN LIDLNSPPPDQTTNKLGHFDPLQATTAANSVLPSVRDVFDGPQCPLTAEV WFHAGISRPISERLLQQDGDFLVRESQGKRGQYVLTGLEGKTPKHLLLID PEGVVRTKDRIFDSISHLINYHWAHALPIISEDSELVLRNPVRRPQQDQA ASPITSASS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24647-PA | 411 | GF24647-PA | 1..401 | 1..399 | 1912 | 89.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15375-PA | 408 | GG15375-PA | 1..408 | 1..409 | 2162 | 99 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15138-PA | 442 | GH15138-PA | 1..427 | 1..395 | 1725 | 82.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Shc-PA | 409 | CG3715-PA | 1..409 | 1..409 | 2142 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12075-PA | 422 | GI12075-PA | 15..418 | 13..400 | 1748 | 84.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22629-PA | 423 | GL22629-PA | 1..406 | 1..395 | 1832 | 87.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17637-PA | 423 | GA17637-PA | 1..406 | 1..395 | 1832 | 87.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25147-PA | 409 | GM25147-PA | 1..409 | 1..409 | 2183 | 99.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14181-PA | 409 | GD14181-PA | 1..409 | 1..409 | 2193 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13345-PA | 418 | GJ13345-PA | 17..415 | 15..401 | 1779 | 86 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK17568-PA | 434 | GK17568-PA | 1..417 | 1..395 | 1806 | 85.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE20839-PA | 408 | GE20839-PA | 1..408 | 1..409 | 2163 | 99 | Plus |