Clone FI07606 Report

Search the DGRC for FI07606

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:76
Well:6
Vector:pOT2
Associated Gene/TranscriptUro-RA
Protein status:FI07606.pep: gold
Sequenced Size:1253

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
Uro 2008-12-18 5.12 accounting

Clone Sequence Records

FI07606.complete Sequence

1253 bp assembled on 2008-09-15

GenBank Submission: BT044508.1

> FI07606.complete
TCACAATGTTTGCCACGCCCCTCAGACAGCCAGCTGCGGCTAACCACCAG
ACCCCAAAGAATTCCGCCGGCATGGATGAGCATGGTAAGCCGTATCAGTA
CGAGATTACCGATCACGGATACGGCAAGGATGCGGTCAAGGTGCTGCATG
TCAGCCGCAACGGACCCGTGCACGCCATCCAGGAATTCGAGGTGGGCACT
CACCTGAAGTTGTACAGCAAAAAGGATTACTACCAGGGCAACAACTCGGA
CATCGTGGCCACCGATTCGCAGAAGAACACCGTCTATTTGCTGGCGAAAA
AGCATGGCATTGAAAGTCCCGAGAAGTTTGCTCTGCTCCTGGCCAGGCAC
TTTATTAACAAATACTCGCACGTGGAGGAGGCGCACGTTCATGTGGAGGC
GTATCCCTGGCAGCGAGTTTGCCAGGAGGAGACCAGGACCAACGTCAATG
GGAAGTGCGAGAACGGAGTCCAAGGGAACTGCGACTTCAGCTCCATTGAC
AACAGATCACTGCACAATCACGCTTTTATATTCACGCCCACCGCTCTTCA
CTACTGCGATGTGGTTATAAGGAGAACAGATCCCAAACAAACGGTCATCA
CGGGCATCAAGGGTCTCCGGGTGCTGAAGACGACCCAATCCTCGTTCGTG
AACTTCGTGAACGATGAGTTCAGATCTCTGCCAGATCAGTATGATCGCAT
CTTTAGCACCGTGGTGGATTGCTCCTGGGAGTACTCCGATACCGAGAACT
TGGACTTCCTCAGGGCCTGGCAAACGGTCAAAAACATAATCATTCGTAAC
TTTGCTGGCGATCCGCAGGTGGGCGTGTCCTCGCCCTCCGTTCAGCACAC
CCTGTATCTGAGTGAAAGACAGGTCCTGGATGTCCTGCCGCAGGTGTCGG
TCATTTCGATGACCATGCCAAACAAGCACTACTTCAACTTCGATACGAAG
CCCTTCCAGAAGATTGCACCCGGCGACAACAATGAAGTTTTCATCCCAGT
GGACAAGCCACATGGCACCATCTATGCCCAATTGGCCCGGAAGAACATCA
ATAGTCACCTGTAGATCGATCTCTGATGTAGTAAATCTAAATCAATCTAA
ATCAATTTAGCCAATTCATAATTGCATGCGGCGAAGTTATATATGTATTT
TAAATTATTTAAGCAAACGAATCATATGCTGCGTTCTTCTTATTTAAACA
ATAATAAACTAATAAAAAATAAAGTGTAAAAATGAAAAAAAAAAAAAAAA
AAA

FI07606.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:01:22
Subject Length Description Subject Range Query Range Score Percent Strand
Uro-RA 1370 Uro-RA 121..1360 1..1240 6185 99.9 Plus
Uro.a 1524 Uro.a 291..1524 1..1234 6170 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-17 00:13:56
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 7779843..7780499 578..1234 3225 99.4 Plus
chr2L 23010047 chr2L 7779197..7779775 1..579 2895 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:18:51 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-17 00:13:55
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 7780759..7781421 578..1240 3300 99.8 Plus
2L 23513712 2L 7780113..7780691 1..579 2895 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:19:59
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 7780759..7781421 578..1240 3300 99.8 Plus
2L 23513712 2L 7780113..7780691 1..579 2895 100 Plus
Blast to na_te.dros performed on 2019-03-17 00:13:55 has no hits.

FI07606.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-17 00:15:01 Download gff for FI07606.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 7779197..7779775 1..579 100 -> Plus
chr2L 7779845..7780499 580..1234 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:55:59 Download gff for FI07606.complete
Subject Subject Range Query Range Percent Splice Strand
Uro-RA 1..1059 6..1064 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:01:39 Download gff for FI07606.complete
Subject Subject Range Query Range Percent Splice Strand
Uro-RA 1..1059 6..1064 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 18:32:22 Download gff for FI07606.complete
Subject Subject Range Query Range Percent Splice Strand
Uro-RA 1..1059 6..1064 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 17:14:40 Download gff for FI07606.complete
Subject Subject Range Query Range Percent Splice Strand
Uro-RA 1..1059 6..1064 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:20:06 Download gff for FI07606.complete
Subject Subject Range Query Range Percent Splice Strand
Uro-RA 29..1262 1..1234 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:01:39 Download gff for FI07606.complete
Subject Subject Range Query Range Percent Splice Strand
Uro-RA 29..1262 1..1234 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:32:22 Download gff for FI07606.complete
Subject Subject Range Query Range Percent Splice Strand
Uro-RA 29..1262 1..1234 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 12:14:00 Download gff for FI07606.complete
Subject Subject Range Query Range Percent Splice Strand
Uro-RA 29..1262 1..1234 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:14:40 Download gff for FI07606.complete
Subject Subject Range Query Range Percent Splice Strand
Uro-RA 29..1262 1..1234 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 00:15:01 Download gff for FI07606.complete
Subject Subject Range Query Range Percent Splice Strand
2L 7780113..7780691 1..579 100 -> Plus
2L 7780761..7781415 580..1234 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 00:15:01 Download gff for FI07606.complete
Subject Subject Range Query Range Percent Splice Strand
2L 7780113..7780691 1..579 100 -> Plus
2L 7780761..7781415 580..1234 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 00:15:01 Download gff for FI07606.complete
Subject Subject Range Query Range Percent Splice Strand
2L 7780113..7780691 1..579 100 -> Plus
2L 7780761..7781415 580..1234 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:32:22 Download gff for FI07606.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 7780113..7780691 1..579 100 -> Plus
arm_2L 7780761..7781415 580..1234 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:29:08 Download gff for FI07606.complete
Subject Subject Range Query Range Percent Splice Strand
2L 7780113..7780691 1..579 100 -> Plus
2L 7780761..7781415 580..1234 100   Plus

FI07606.pep Sequence

Translation from 2 to 1063

> FI07606.pep
TMFATPLRQPAAANHQTPKNSAGMDEHGKPYQYEITDHGYGKDAVKVLHV
SRNGPVHAIQEFEVGTHLKLYSKKDYYQGNNSDIVATDSQKNTVYLLAKK
HGIESPEKFALLLARHFINKYSHVEEAHVHVEAYPWQRVCQEETRTNVNG
KCENGVQGNCDFSSIDNRSLHNHAFIFTPTALHYCDVVIRRTDPKQTVIT
GIKGLRVLKTTQSSFVNFVNDEFRSLPDQYDRIFSTVVDCSWEYSDTENL
DFLRAWQTVKNIIIRNFAGDPQVGVSSPSVQHTLYLSERQVLDVLPQVSV
ISMTMPNKHYFNFDTKPFQKIAPGDNNEVFIPVDKPHGTIYAQLARKNIN
SHL*

FI07606.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 12:39:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF15322-PA 351 GF15322-PA 1..351 2..353 1679 88.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 12:39:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG10494-PA 351 GG10494-PA 1..351 2..353 1831 95.7 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 12:39:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH19188-PA 324 GH19188-PA 1..324 2..353 1225 65.3 Plus
Dgri\GH19189-PA 327 GH19189-PA 1..327 2..349 1104 58.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:05:14
Subject Length Description Subject Range Query Range Score Percent Strand
Uro-PA 352 CG7171-PA 1..352 2..353 1882 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 12:39:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI24222-PA 335 GI24222-PA 1..335 2..353 1358 71.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 12:39:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL19284-PA 346 GL19284-PA 1..346 2..353 1632 86.1 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 12:39:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\Uro-PA 346 GA20153-PA 1..346 2..353 1636 86.4 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 12:39:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM16558-PA 351 GM16558-PA 1..351 2..353 1872 98.3 Plus
Dsec\GM16560-PA 241 GM16560-PA 3..241 111..353 1152 88.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 12:39:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD23486-PA 351 GD23486-PA 1..351 2..353 1868 98.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 12:39:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\Uro-PA 342 GJ10793-PA 1..342 2..353 1348 73 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 12:39:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK24407-PA 352 GK24407-PA 1..352 2..353 1576 83.4 Plus
Dwil\GK24639-PA 346 GK24639-PA 1..346 2..353 1530 81.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 12:39:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE14614-PA 351 GE14614-PA 1..351 2..353 1810 95.2 Plus

FI07606.hyp Sequence

Translation from 2 to 1063

> FI07606.hyp
TMFATPLRQPAAANHQTPKNSAGMDEHGKPYQYEITDHGYGKDAVKVLHV
SRNGPVHAIQEFEVGTHLKLYSKKDYYQGNNSDIVATDSQKNTVYLLAKK
HGIESPEKFALLLARHFINKYSHVEEAHVHVEAYPWQRVCQEETRTNVNG
KCENGVQGNCDFSSIDNRSLHNHAFIFTPTALHYCDVVIRRTDPKQTVIT
GIKGLRVLKTTQSSFVNFVNDEFRSLPDQYDRIFSTVVDCSWEYSDTENL
DFLRAWQTVKNIIIRNFAGDPQVGVSSPSVQHTLYLSERQVLDVLPQVSV
ISMTMPNKHYFNFDTKPFQKIAPGDNNEVFIPVDKPHGTIYAQLARKNIN
SHL*

FI07606.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:33:18
Subject Length Description Subject Range Query Range Score Percent Strand
Uro-PA 352 CG7171-PA 1..352 2..353 1882 100 Plus