Clone FI07638 Report

Search the DGRC for FI07638

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:76
Well:38
Vector:pOT2
Associated Gene/TranscriptCG3556-RA
Protein status:FI07638.pep: gold
Sequenced Size:2444

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG3556 2008-08-15 Release 5.9 accounting
CG3556 2008-12-18 5.12 accounting

Clone Sequence Records

FI07638.complete Sequence

2444 bp assembled on 2008-08-14

GenBank Submission: BT044343.1

> FI07638.complete
GCAGCCCTGCAAGGAACGGTCTGAGAACATTGAAAATCAAAAAATCGCAG
GAAGCGCTGGCGAAAAACGCGAATATCGAGACGTCCCTCGCCCCGCCCGC
AAAAAATCGCGAAATCTTACACCGAAACCGAAATACAAGATAATTAAGGG
TATAAATCCCTCGAAGCGACAGAAAAGCGGGCGAAAAAGGATACAATTTC
TAGACTTTCAAGTGTGTCAAAATCGAACAAAGGCGAGAAGTCGGATTACG
GATTACATAGAACTTTATATACATTTGTATATGTGTATATAGATTGCATA
TAGGCTGATAACGGGACTTCATTTGCCTTTTATCCTTGGCGGCTCGGCCT
TTGTTGTTATTGTATTATTATAATTCTCTTCAGGATGTTGTCGCTGTCAT
CGCCGCCGTGGCTCTTGCTCCTCGTCCTTTTCTTCTTCGCAAATGGCTCG
GCAACAGTGGTTTCCTTGGCGGAGAATGTGACTCTGGCGACGTTACCATC
CACCTCGCCAATTTCCGTGAGCTTTAGCACGACCTCCTCGGTGGTGGCGC
CCATTTCCACCGAATTGGAGAATCAAACAGCCAGCAGCAGCAACCTTAAT
ACAAACAACGAAGCCAGCGATGAGCAAACTGGCAATAGCAACAGCAACAC
GAGCAGTCACAGCAGAAACATCAATGGTTTGCCCAGCAGCAACAGCAACA
TTGACAATGCCAACAGCAACTCAAGTTCCGTTTCCTCTTTGAGTACAACG
ACATCTGCCATTTCTGGTGTAGATCAGCAGGAGTCCCTCATCCTGGCAAC
TCCCACTGCCCTGAATGGCAGCGGTACACCGCCCGAGCATCAGACAATTG
GTCAGGCACCGCCCACAAAGGGTGAACAGGAGGCCATCCTGCGAGCTTTG
GATTGGCTCAAGGAGAAGAGGGCTTCGGACTACGGCTGGGGCAACGATAC
CCATGTGGTTATACTGGCCAAAGAGCTTTCCGGCGGCCGAGATCCTAACG
ATAGTGTAGATGGTCATGTGCAGGTCATCCAAGAGCTGGAGGATACGCTA
TCCGTGAAGGAAATGGAGATCGAGATCCTGGCCATGCTGGATCGCCATCA
TACACTCCCAAAGCCCCTGGATCTCGACAAGCTGGCCAGATACGTCCTGG
CCTTGGGTTCCCTGTGCAAGGACCCGAAGCATTTCCATGGCCACGACTTG
GTGGCCACACTGCAGCATCATGAGCCGGCCCAGGATATTGAGTTCGCACT
AACCACTCTGTCGGCCTGCAGTTCGGCGGCCCATGTAAGGAAACGTCAGA
TCCGACGGCTCCTGGACATTGCCAGCGGAGTGACGGACCAGAGCGTTGAT
GCCATTGCCATGGTAATTCTAGCCTTGCGTTGCATCGTCACCGATCATCG
CCATCGACATCTGCAACACTTTGTCCGACGACCGGCGAGGGGACTGGCCA
CTCTGCAGGATCAGCGCGGCAGTTTCGGATCGCTTAGGAGCACAGCACTC
GCCATGCAGGCTCTACAGGATTTAGAGTACGATCCGGCTGGACATTGGAA
CCGTACAGCCGCCTCGCGCTACATCCTGAGTCGCCAGCGAGCGGATGGAG
GATGGAGCGAGGAACCGCTGCAGGATGGCCAGGAACCCGACATCGGTGTG
GGCCTCACGGCGGACATCATTCTCGCTTTGGGCTGGAAGGGATTGGGTGC
AGTGCGGGCACTGCAATGCGACCATGTGATACGCGAGAGCAGTGATCCTA
CGGAGAACGGCGAGCCAAAGCTGGCGGTGCCCTTCGGACTTAGTTCCTCT
GCAGAAGAGTCGGATGCCAAGAACATCTCCTACACGTACACACTTTGGGT
GGGATCCAATGTGACCGAGTCCTTCTCCCTGTCACTCGTCTCACCCAAGA
ACACTAGCTTCTTTAAGGCCATGACCCAAGCGGCCGAAATGGATCCCAGA
TTTATTTTCGAGGCTCGTGAATGGCCCAATGGTCACTATGTGCACACCCT
GTATGGCAAAAAGGAGGAGCCTCGAGGGTATCACTACTGGCTGCTTTATC
GATTGCCAGAGTTGCCCGATCCCAATAATACGCCCGGGAATCAGCTTATT
GCGCCTGTTGGTGTGGACGAGCTAATGGTCGAGGATGGGGAGCATTATCT
TTACTGGTACAAGAAGCTCTAAGCACGCGGCCTTAGACGGAGCTGCAGTT
TAACCCACTAAGCAAAGTCGATAAATACCCGGTGCTATTGGACTATATTT
ATTATATATATGGCCATAGTCACGTCTCACACACACACAACACACACGCA
ACAAGCAAAAAGGCACTTACACTCGCACAGGAATAGCTGTATGCTACACA
GTACAGCTATTCCTGAGTAAGTGCATATATAACTGCATAATAATGGCGTA
ATCAAAAAAAAAAACAAAGCAAAACAAAAAAAAAAAAAAAAAAA

FI07638.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:04:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG3556-RA 2632 CG3556-RA 11..2453 1..2442 12145 99.8 Plus
CG3556.d 3183 CG3556.d 11..2453 1..2442 12145 99.8 Plus
CG3556.b 4117 CG3556.b 11..2453 1..2442 12145 99.8 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 16:44:55
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 4424172..4425557 368..1753 6630 98.6 Plus
chrX 22417052 chrX 4423109..4423479 1..371 1825 99.5 Plus
chrX 22417052 chrX 4426406..4426722 2110..2425 1535 99.7 Plus
chrX 22417052 chrX 4425738..4425934 1753..1949 970 99.5 Plus
chrX 22417052 chrX 4426143..4426228 2027..2112 430 100 Plus
chrX 22417052 chrX 4426000..4426082 1947..2029 415 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:19:08 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 16:44:52
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 4531293..4532678 368..1753 6915 99.9 Plus
X 23542271 X 4530231..4530601 1..371 1855 100 Plus
X 23542271 X 4533524..4533857 2110..2442 1590 99.1 Plus
X 23542271 X 4532855..4533051 1753..1949 985 100 Plus
X 23542271 X 4533260..4533345 2027..2112 430 100 Plus
X 23542271 X 4533117..4533199 1947..2029 415 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:23:06
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 4539391..4540776 368..1753 6915 99.9 Plus
X 23527363 X 4538329..4538699 1..371 1855 100 Plus
X 23527363 X 4541622..4541955 2110..2442 1600 99.1 Plus
X 23527363 X 4540953..4541149 1753..1949 985 100 Plus
X 23527363 X 4541358..4541443 2027..2112 430 100 Plus
X 23527363 X 4541215..4541297 1947..2029 415 100 Plus
Blast to na_te.dros performed 2019-03-16 16:44:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6700..6922 561..780 217 59.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2305..2394 631..720 216 71.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6764..6899 582..720 210 63.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6734..6872 582..720 209 61.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6776..6914 582..720 200 64.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2844..2985 582..720 198 62.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2302..2445 577..720 197 61.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2330..2415 632..720 195 70.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2355..2537 582..760 194 57.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6755..6878 582..720 193 65.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2291..2466 546..720 192 59.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6797..6937 582..725 190 61.1 Plus
roo 9092 roo DM_ROO 9092bp 1065..1168 623..726 186 66.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2306..2427 590..720 174 64.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2325..2406 633..720 174 70.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2409..2538 582..720 169 62.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6727..6815 632..720 166 65.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6831..6949 583..701 156 62.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6809..6951 582..723 153 61.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6718..6794 635..720 150 67.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2502..2630 582..719 144 63.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6843..6923 576..654 138 69.9 Plus
roo 9092 roo DM_ROO 9092bp 1060..1155 581..676 138 66 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2896..2987 583..674 127 65.6 Plus
BS 5142 BS BS 5142bp 1942..2075 570..702 126 60.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2596..2667 637..708 118 66.7 Plus
roo 9092 roo DM_ROO 9092bp 999..1130 593..720 118 58.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2747..2820 644..720 117 63.6 Plus
Dvir\Het-A 6610 Dvir\Het-A HETAVIR 6610bp 3294..3387 582..674 115 63.5 Plus

FI07638.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 16:45:33 Download gff for FI07638.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 4423109..4423479 1..371 99 -> Plus
chrX 4424176..4424435 372..631 99 == Plus
chrX 4424528..4425557 724..1753 98 -> Plus
chrX 4425739..4425934 1754..1949 99 -> Plus
chrX 4426003..4426080 1950..2027 100 -> Plus
chrX 4426144..4426226 2028..2110 100 -> Plus
chrX 4426407..4426699 2111..2403 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:56:22 Download gff for FI07638.complete
Subject Subject Range Query Range Percent Splice Strand
CG3556-RA 1..1788 385..2172 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:06:46 Download gff for FI07638.complete
Subject Subject Range Query Range Percent Splice Strand
CG3556-RA 1..1788 385..2172 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 16:43:57 Download gff for FI07638.complete
Subject Subject Range Query Range Percent Splice Strand
CG3556-RA 1..1788 385..2172 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-09-08 12:18:18 Download gff for FI07638.complete
Subject Subject Range Query Range Percent Splice Strand
CG3556-RA 1..1788 385..2172 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 12:40:11 Download gff for FI07638.complete
Subject Subject Range Query Range Percent Splice Strand
CG3556-RA 1..1788 385..2172 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:31:40 Download gff for FI07638.complete
Subject Subject Range Query Range Percent Splice Strand
CG3556-RA 1..2403 1..2403 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:06:46 Download gff for FI07638.complete
Subject Subject Range Query Range Percent Splice Strand
CG3556-RA 1..2403 1..2403 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:43:57 Download gff for FI07638.complete
Subject Subject Range Query Range Percent Splice Strand
CG3556-RA 1..2403 1..2403 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-14 11:28:44 Download gff for FI07638.complete
Subject Subject Range Query Range Percent Splice Strand
CG3556-RA 1..2403 1..2403 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 12:40:11 Download gff for FI07638.complete
Subject Subject Range Query Range Percent Splice Strand
CG3556-RA 1..2403 1..2403 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:45:33 Download gff for FI07638.complete
Subject Subject Range Query Range Percent Splice Strand
X 4533261..4533343 2028..2110 100 -> Plus
X 4533120..4533197 1950..2027 100 -> Plus
X 4530231..4530601 1..371 100 -> Plus
X 4531297..4532678 372..1753 100 -> Plus
X 4532856..4533051 1754..1949 100 -> Plus
X 4533525..4533817 2111..2403 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:45:33 Download gff for FI07638.complete
Subject Subject Range Query Range Percent Splice Strand
X 4533261..4533343 2028..2110 100 -> Plus
X 4533120..4533197 1950..2027 100 -> Plus
X 4530231..4530601 1..371 100 -> Plus
X 4531297..4532678 372..1753 100 -> Plus
X 4532856..4533051 1754..1949 100 -> Plus
X 4533525..4533817 2111..2403 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:45:33 Download gff for FI07638.complete
Subject Subject Range Query Range Percent Splice Strand
X 4533261..4533343 2028..2110 100 -> Plus
X 4533120..4533197 1950..2027 100 -> Plus
X 4530231..4530601 1..371 100 -> Plus
X 4531297..4532678 372..1753 100 -> Plus
X 4532856..4533051 1754..1949 100 -> Plus
X 4533525..4533817 2111..2403 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:43:57 Download gff for FI07638.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 4427294..4427376 2028..2110 100 -> Plus
arm_X 4427558..4427850 2111..2403 100   Plus
arm_X 4426889..4427084 1754..1949 100 -> Plus
arm_X 4427153..4427230 1950..2027 100 -> Plus
arm_X 4424264..4424634 1..371 100 -> Plus
arm_X 4425330..4426711 372..1753 100 -> Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:35:52 Download gff for FI07638.complete
Subject Subject Range Query Range Percent Splice Strand
X 4541359..4541441 2028..2110 100 -> Plus
X 4541623..4541915 2111..2403 100   Plus
X 4541218..4541295 1950..2027 100 -> Plus
X 4538329..4538699 1..371 100 -> Plus
X 4539395..4540776 372..1753 100 -> Plus
X 4540954..4541149 1754..1949 100 -> Plus

FI07638.pep Sequence

Translation from 384 to 2171

> FI07638.pep
MLSLSSPPWLLLLVLFFFANGSATVVSLAENVTLATLPSTSPISVSFSTT
SSVVAPISTELENQTASSSNLNTNNEASDEQTGNSNSNTSSHSRNINGLP
SSNSNIDNANSNSSSVSSLSTTTSAISGVDQQESLILATPTALNGSGTPP
EHQTIGQAPPTKGEQEAILRALDWLKEKRASDYGWGNDTHVVILAKELSG
GRDPNDSVDGHVQVIQELEDTLSVKEMEIEILAMLDRHHTLPKPLDLDKL
ARYVLALGSLCKDPKHFHGHDLVATLQHHEPAQDIEFALTTLSACSSAAH
VRKRQIRRLLDIASGVTDQSVDAIAMVILALRCIVTDHRHRHLQHFVRRP
ARGLATLQDQRGSFGSLRSTALAMQALQDLEYDPAGHWNRTAASRYILSR
QRADGGWSEEPLQDGQEPDIGVGLTADIILALGWKGLGAVRALQCDHVIR
ESSDPTENGEPKLAVPFGLSSSAEESDAKNISYTYTLWVGSNVTESFSLS
LVSPKNTSFFKAMTQAAEMDPRFIFEAREWPNGHYVHTLYGKKEEPRGYH
YWLLYRLPELPDPNNTPGNQLIAPVGVDELMVEDGEHYLYWYKKL*

FI07638.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 01:41:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF19462-PA 599 GF19462-PA 19..599 18..595 2441 82.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 01:42:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG18709-PA 595 GG18709-PA 1..595 1..595 3124 98.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 01:42:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH12077-PA 609 GH12077-PA 166..609 152..595 2325 95.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:18:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG3556-PB 595 CG3556-PB 1..595 1..595 3079 100 Plus
CG3556-PA 595 CG3556-PA 1..595 1..595 3079 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 01:42:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI21790-PA 611 GI21790-PA 136..611 136..595 2352 91.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 01:42:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL14298-PA 1478 GL14298-PA 1000..1478 130..595 2374 92.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 01:42:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA22743-PA 604 GA22743-PA 126..604 130..595 2374 92.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 01:42:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM12347-PA 596 GM12347-PA 1..596 1..595 3144 99.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 01:42:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD16692-PA 596 GD16692-PA 1..596 1..595 3140 99 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 01:42:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ16962-PA 624 GJ16962-PA 181..624 152..595 2344 96.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 01:42:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK15758-PA 598 GK15758-PA 28..598 25..595 2377 79.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 01:42:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE16347-PA 593 GE16347-PA 1..593 1..595 3062 96.5 Plus

FI07638.hyp Sequence

Translation from 384 to 2171

> FI07638.hyp
MLSLSSPPWLLLLVLFFFANGSATVVSLAENVTLATLPSTSPISVSFSTT
SSVVAPISTELENQTASSSNLNTNNEASDEQTGNSNSNTSSHSRNINGLP
SSNSNIDNANSNSSSVSSLSTTTSAISGVDQQESLILATPTALNGSGTPP
EHQTIGQAPPTKGEQEAILRALDWLKEKRASDYGWGNDTHVVILAKELSG
GRDPNDSVDGHVQVIQELEDTLSVKEMEIEILAMLDRHHTLPKPLDLDKL
ARYVLALGSLCKDPKHFHGHDLVATLQHHEPAQDIEFALTTLSACSSAAH
VRKRQIRRLLDIASGVTDQSVDAIAMVILALRCIVTDHRHRHLQHFVRRP
ARGLATLQDQRGSFGSLRSTALAMQALQDLEYDPAGHWNRTAASRYILSR
QRADGGWSEEPLQDGQEPDIGVGLTADIILALGWKGLGAVRALQCDHVIR
ESSDPTENGEPKLAVPFGLSSSAEESDAKNISYTYTLWVGSNVTESFSLS
LVSPKNTSFFKAMTQAAEMDPRFIFEAREWPNGHYVHTLYGKKEEPRGYH
YWLLYRLPELPDPNNTPGNQLIAPVGVDELMVEDGEHYLYWYKKL*

FI07638.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:34:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG3556-PB 595 CG3556-PB 1..595 1..595 3079 100 Plus
CG3556-PA 595 CG3556-PA 1..595 1..595 3079 100 Plus