Clone FI07655 Report

Search the DGRC for FI07655

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:76
Well:55
Vector:pOT2
Associated Gene/TranscriptGmd-RA
Protein status:FI07655.pep: gold
Sequenced Size:1545

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
Gmd 2008-08-15 Release 5.9 accounting
Gmd 2008-12-18 5.12 accounting

Clone Sequence Records

FI07655.complete Sequence

1545 bp assembled on 2008-08-14

GenBank Submission: BT099628.1

> FI07655.complete
ACAAAAGTTTGTTTATTATACGGGCTGCGTCGGCGTGAAAATTAAAACTA
GCGTCAGTACATGCTAAATACCCGGCTAATTGCAATGTCGACTTCCGATG
GAGCCCCGGAAACCAAGAAACAACGTCCTGAAAGCAGCAGCAACGGCAGC
AAGGACCAAAACGGAACGGAAGCCGGCGCCGAAGGCGACTCCCGTGATAA
AGTGGCGCTGATAACAGGCATAACGGGCCAGGATGGCTCCTATTTGGCAG
AGTTTCTGCTCAAGAAGGACTACGAGGTGCACGGCATTATTCGGCGGGCC
AGCACCTTCAACACCACCCGCATTGAGCATCTATATGCCGATCCAAAGGC
GCACAAAGGTGGGCGTATGAAGCTCCACTATGGCGACATGACGGACAGCA
GCAGCCTGGTGAAGATCATCAATATGGTGAAGCCCACGGAGATTTACAAT
TTGGCAGCACAATCCCATGTCAAGGTCTCCTTCGATCTCAGTGAGTACAC
GGCCGAGGTGGACGCCGTGGGCACGTTGCGCATTCTGGACGCCATCCGCA
CTTGTGGCATGGAAAAGAACGTGAGGTTTTACCAAGCCTCCACTTCGGAG
CTATATGGTAAAGTAGTGGAGACGCCACAGAACGAACAGACGCCCTTCTA
TCCCAGGTCGCCATATGCCTGCGCTAAGATGTACGGCTTTTGGATCGTCA
TCAACTACCGGGAAGCCTACAACATGTACGCCTGTAATGGAATCCTCTTC
AACCATGAAAGTCCACGACGTGGCGAGAACTTTGTGACTAGAAAAATCAC
CCGTAGCGTGGCCAAGATTTATCACAAGCAAATGGAGTATTTTGAACTGG
GAAATCTCGACTCAAAGCGCGACTGGGGACATGCCAGCGACTACGTGGAG
GCCATGTGGATGATGCTGCAACGGGAGTCTCCTTCCGACTACGTCATAGC
TACAGGCGAAACGCACAGTGTGCGCGAATTCGTGGAAGCCGCGTTCAAGC
ATATTGATCGAGAGATAACGTGGAAGGGCAAGGGTGTGGACGAGGTGGGA
GTGGAGAACGGCACGGGTATTGTGCGCGTCCGCATAAATCCAAAGTATTT
TCGGCCGACGGAGGTCGATCTGCTGCAAGGCGACGCGTCCAAAGCCAATC
GAGAGCTAAACTGGACGCCTAAAGTTACCTTCGTGGAATTGGTTAGCGAC
ATGATGAAGGCTGACATCGAATTAATGAGGAAAAATCCAATCGCTTAAGG
CCTACCTGGCTTCCAGCTTGGACTGGGATCATTTACGGCACAAAGCTCTC
TGCCCGCTTGCGGAGCTATACACTAACCATAGTCTAAGCGTAAAGTGATC
AGCGTAGTTGATTTGTCAATGTATTTCTGTATTCTCGTGGGAATTTGCAA
TCATTCCTTTTTCTACTTTGCCGCGTACGTTCATGTTCAGTGTGTGATTC
TACTTGTTTTTATACAGTACCAGATGTAACGAATATTTGAAATAAAGACG
TTCGAGTAACAACGTTTTAATACCTTCAAAAAAAAAAAAAAAAAA

FI07655.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:05:04
Subject Length Description Subject Range Query Range Score Percent Strand
Gmd-RA 1756 Gmd-RA 181..1710 1..1530 7500 99.3 Plus
mRpL28-RA 1462 mRpL28-RA 1265..1462 1530..1333 975 99.4 Minus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 23:14:51
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 4974400..4975260 1527..667 4245 99.5 Minus
chr2L 23010047 chr2L 4975320..4975759 667..228 2185 99.8 Minus
chr2L 23010047 chr2L 4975858..4976089 232..1 1085 97.8 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:19:17 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 23:14:49
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 4975297..4976160 1530..667 4260 99.5 Minus
2L 23513712 2L 4976220..4976659 667..228 2185 99.8 Minus
2L 23513712 2L 4976758..4976989 232..1 1085 97.8 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:23:24
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 4975297..4976160 1530..667 4260 99.5 Minus
2L 23513712 2L 4976220..4976659 667..228 2185 99.7 Minus
2L 23513712 2L 4976758..4976989 232..1 1085 97.8 Minus
Blast to na_custom.ecoli performed 2008-08-14 11:35:55
Subject Length Description Subject Range Query Range Score Percent Strand
E.coli 18252 E.coli 9475..9638 803..640 235 76.2 Minus
Escherichia 20254 Escherichia 14490..14653 803..640 235 76.2 Minus
Escherichia 23884 Escherichia 9077..9240 640..803 235 76.2 Plus
Blast to na_te.dros performed on 2019-03-15 23:14:49 has no hits.

FI07655.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 23:15:36 Download gff for FI07655.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 4974400..4975259 668..1527 99 <- Minus
chr2L 4975320..4975755 232..667 99 <- Minus
chr2L 4975859..4976089 1..231 97   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:56:34 Download gff for FI07655.complete
Subject Subject Range Query Range Percent Splice Strand
Gmd-RA 1..1188 61..1248 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:07:16 Download gff for FI07655.complete
Subject Subject Range Query Range Percent Splice Strand
Gmd-RA 1..1188 61..1248 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:34:50 Download gff for FI07655.complete
Subject Subject Range Query Range Percent Splice Strand
Gmd-RA 1..1188 61..1248 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-09-08 12:18:28 Download gff for FI07655.complete
Subject Subject Range Query Range Percent Splice Strand
Gmd-RA 1..1188 61..1248 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:25:58 Download gff for FI07655.complete
Subject Subject Range Query Range Percent Splice Strand
Gmd-RA 1..1188 61..1248 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:32:24 Download gff for FI07655.complete
Subject Subject Range Query Range Percent Splice Strand
Gmd-RA 30..1556 1..1527 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:07:15 Download gff for FI07655.complete
Subject Subject Range Query Range Percent Splice Strand
Gmd-RA 30..1556 1..1527 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:34:50 Download gff for FI07655.complete
Subject Subject Range Query Range Percent Splice Strand
Gmd-RA 35..1561 1..1527 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-14 11:29:22 Download gff for FI07655.complete
Subject Subject Range Query Range Percent Splice Strand
Gmd-RA 30..1556 1..1527 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:25:58 Download gff for FI07655.complete
Subject Subject Range Query Range Percent Splice Strand
Gmd-RA 35..1561 1..1527 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:15:36 Download gff for FI07655.complete
Subject Subject Range Query Range Percent Splice Strand
2L 4975300..4976159 668..1527 99 <- Minus
2L 4976220..4976655 232..667 99 <- Minus
2L 4976759..4976989 1..231 97   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:15:36 Download gff for FI07655.complete
Subject Subject Range Query Range Percent Splice Strand
2L 4975300..4976159 668..1527 99 <- Minus
2L 4976220..4976655 232..667 99 <- Minus
2L 4976759..4976989 1..231 97   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:15:36 Download gff for FI07655.complete
Subject Subject Range Query Range Percent Splice Strand
2L 4975300..4976159 668..1527 99 <- Minus
2L 4976220..4976655 232..667 99 <- Minus
2L 4976759..4976989 1..231 97   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:34:50 Download gff for FI07655.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 4975300..4976159 668..1527 99 <- Minus
arm_2L 4976220..4976655 232..667 99 <- Minus
arm_2L 4976759..4976989 1..231 97   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:36:30 Download gff for FI07655.complete
Subject Subject Range Query Range Percent Splice Strand
2L 4975300..4976159 668..1527 99 <- Minus
2L 4976220..4976655 232..667 99 <- Minus
2L 4976759..4976989 1..231 97   Minus

FI07655.pep Sequence

Translation from 60 to 1247

> FI07655.pep
MLNTRLIAMSTSDGAPETKKQRPESSSNGSKDQNGTEAGAEGDSRDKVAL
ITGITGQDGSYLAEFLLKKDYEVHGIIRRASTFNTTRIEHLYADPKAHKG
GRMKLHYGDMTDSSSLVKIINMVKPTEIYNLAAQSHVKVSFDLSEYTAEV
DAVGTLRILDAIRTCGMEKNVRFYQASTSELYGKVVETPQNEQTPFYPRS
PYACAKMYGFWIVINYREAYNMYACNGILFNHESPRRGENFVTRKITRSV
AKIYHKQMEYFELGNLDSKRDWGHASDYVEAMWMMLQRESPSDYVIATGE
THSVREFVEAAFKHIDREITWKGKGVDEVGVENGTGIVRVRINPKYFRPT
EVDLLQGDASKANRELNWTPKVTFVELVSDMMKADIELMRKNPIA*

FI07655.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 01:50:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF21530-PA 389 GF21530-PA 1..389 9..395 1894 92 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 01:50:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG24331-PA 387 GG24331-PA 1..387 9..395 2078 99 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 01:50:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH11516-PA 265 GH11516-PA 1..140 7..139 534 75 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:39:30
Subject Length Description Subject Range Query Range Score Percent Strand
Gmd-PA 395 CG8890-PA 1..395 1..395 2065 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 01:50:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI17012-PA 390 GI17012-PA 1..390 9..395 1863 89.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 01:50:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL26488-PA 389 GL26488-PA 1..389 9..395 1853 88.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 01:50:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA21394-PA 389 GA21394-PA 1..389 9..395 1853 88.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 01:50:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM18052-PA 387 GM18052-PA 1..387 9..395 2067 98.4 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 01:50:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD22672-PA 387 GD22672-PA 1..387 9..395 2077 99 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 01:50:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ24378-PA 387 GJ24378-PA 1..387 9..395 1868 89.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 01:50:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK24598-PA 397 GK24598-PA 1..397 9..395 1836 86.4 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 01:50:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE18711-PA 387 GE18711-PA 1..387 9..395 2055 97.7 Plus

FI07655.hyp Sequence

Translation from 60 to 1247

> FI07655.hyp
MLNTRLIAMSTSDGAPETKKQRPESSSNGSKDQNGTEAGAEGDSRDKVAL
ITGITGQDGSYLAEFLLKKDYEVHGIIRRASTFNTTRIEHLYADPKAHKG
GRMKLHYGDMTDSSSLVKIINMVKPTEIYNLAAQSHVKVSFDLSEYTAEV
DAVGTLRILDAIRTCGMEKNVRFYQASTSELYGKVVETPQNEQTPFYPRS
PYACAKMYGFWIVINYREAYNMYACNGILFNHESPRRGENFVTRKITRSV
AKIYHKQMEYFELGNLDSKRDWGHASDYVEAMWMMLQRESPSDYVIATGE
THSVREFVEAAFKHIDREITWKGKGVDEVGVENGTGIVRVRINPKYFRPT
EVDLLQGDASKANRELNWTPKVTFVELVSDMMKADIELMRKNPIA*

FI07655.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:35:22
Subject Length Description Subject Range Query Range Score Percent Strand
Gmd-PA 395 CG8890-PA 1..395 1..395 2065 100 Plus