BDGP Sequence Production Resources |
Search the DGRC for FI07665
Library: | FI |
Tissue Source: | various Drosophila melanogaster |
Created by: | |
Date Registered: | 2005-11-08 |
Comments: | Drosophila melanogaster corrected cDNA clones |
Original Plate Number: | 76 |
Well: | 65 |
Vector: | pOT2 |
Associated Gene/Transcript | Updo-RA |
Protein status: | FI07665.pep: gold |
Sequenced Size: | 1299 |
Gene | Date | Evidence |
---|---|---|
Updo | 2008-08-15 | Release 5.9 accounting |
Updo | 2008-12-18 | 5.12 accounting |
1299 bp assembled on 2008-08-14
GenBank Submission: BT044350.1
> FI07665.complete AGAACGCACACTCATGCAGAATTGCGGGATTCCGTGACAGATTTCATCAA ATTTACGGGTTTCATCAGTGGAAATAACTTCGTTAGCCCTCTACTACCTT TTTAACAGCCAAAAGTCACTATGAAAGACGCAAAGCCCTTTCCCGTGCTC AAGAATGATAACCTGCTGCGCGCCGCACGTGGCGAGGTGGTGGACCGGGT GCCTGTTTGGGTGATGCGCCAAGCGGGGCGCTACCTGCCGGAGTTCCAGG AGCTGCGAAAGCACCACGACTTCTTCACCGTCTGCCGCACCCCGGAGCTA GCGTGCGAAGTGACCATGCAGCCATTGCGCCGCTTCGACCTGGACGCCTC CATAATTTTTTCGGACATCCTTGTCATTCCCCAAGCACTCGGCCTCACCG TGGAGATGCACGCGGGCGTTGGTCCCGTTCTGCCACAGCCCATCGTGGTG CCGGAGGACCTCAAGCGCCTGACGCCGGACGGAGCCTTGTCCCGCCTCAG CTACGTGGGCGACGCAATCACCATGATGCGGCACAAGCTCGAAGGTCGAG TGCCGCTAATCGGCTTTACAGGAGCGCCGTGGACACTAATGGGATATATG ATCGAGGGCGGTGGGAGCAAGACCATGTCGAAAGCTAAAGCTTGGCTCAA CGAACATCCTGAGGACTCTAAGCTGTTCCTGAACCTGCTGACCGACGCAA TTGTGGACTACCTGGAGATGCAGGTGAAAGCTGGCGCTCAAATGCTGCAG GTATTCGAATCGTCCGCCGAGCATCTCTCCAAGGAGCAGTTCCTGCAGTG GTGTGTACCCTACCTGAAGAGAATACGCGACGAGCTGGTGGACCGTCTCA CAAAGAAGGCCATCCCCGTGGTTCCCATGACGCTGTTCGCTAAGGGTGCT GGGCACTCGCTGAAGGAGCAGAGCGAACTGGGCTACGACGTTATTGGCTT GGATTGGACTGTGGATCCGCTGGAGGCACGCAATTTGGTCGGACCGAACA TTACGTTGCAAGGCAACTTGGATCCTCAGGACATGTACCGCGATCCTGAT GAGCTGCGCAACCTGACCACAGAAATGGTGCACAAGTTCGGCAAGTCGCG CTACATCGCCAATCTGGGACATGGAATCACGCCTCAGACTCCGATCACGA GCATGGAAGTGCTGGTGGAGGCGGTGCACAAGGCTCTGTAGGGTGTGCCT TTCACTAACCTTTAATTTTATGATGCTTTTATCGAATGCAATAAAGACAA TTGGCCTTGGGTTTAGGGTAACCTCAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Updo-RA | 1366 | Updo-RA | 92..1366 | 1..1275 | 6300 | 99.6 | Plus |
Updo-RB | 1217 | Updo-RB | 83..1217 | 134..1268 | 5630 | 99.7 | Plus |
Updo.a | 1207 | Updo.a | 74..1207 | 134..1267 | 5625 | 99.7 | Plus |
Updo.a | 1207 | Updo.a | 1..69 | 67..135 | 345 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 5472421..5473166 | 134..879 | 3700 | 99.7 | Plus |
chr2R | 21145070 | chr2R | 5473225..5473621 | 879..1275 | 1970 | 99.7 | Plus |
chr2R | 21145070 | chr2R | 5472162..5472296 | 1..135 | 645 | 98.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 9586125..9586870 | 134..879 | 3700 | 99.7 | Plus |
2R | 25260384 | 2R | 9586929..9587326 | 879..1276 | 1975 | 99.7 | Plus |
2R | 25260384 | 2R | 9585866..9586000 | 1..135 | 645 | 98.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
rooA | 7621 | rooA ROOA_LTR 7621bp | 6693..6743 | 3..51 | 115 | 72.5 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 5472162..5472296 | 1..135 | 98 | -> | Plus |
chr2R | 5472423..5473166 | 136..879 | 99 | -> | Plus |
chr2R | 5473226..5473621 | 880..1275 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Updo-RA | 1..1071 | 121..1191 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Updo-RA | 1..1071 | 121..1191 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Updo-RA | 1..1071 | 121..1191 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Updo-RA | 1..1071 | 121..1191 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Updo-RA | 1..1071 | 121..1191 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Updo-RA | 1..1267 | 1..1267 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Updo-RA | 1..1267 | 1..1267 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Updo-RA | 25..1299 | 1..1275 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Updo-RA | 1..1267 | 1..1267 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Updo-RA | 25..1299 | 1..1275 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 9584667..9584801 | 1..135 | 98 | -> | Plus |
2R | 9584928..9585671 | 136..879 | 99 | -> | Plus |
2R | 9585731..9586126 | 880..1275 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 9584667..9584801 | 1..135 | 98 | -> | Plus |
2R | 9584928..9585671 | 136..879 | 99 | -> | Plus |
2R | 9585731..9586126 | 880..1275 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 9584667..9584801 | 1..135 | 98 | -> | Plus |
2R | 9584928..9585671 | 136..879 | 99 | -> | Plus |
2R | 9585731..9586126 | 880..1275 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 5472172..5472306 | 1..135 | 98 | -> | Plus |
arm_2R | 5472433..5473176 | 136..879 | 99 | -> | Plus |
arm_2R | 5473236..5473631 | 880..1275 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 9586127..9586870 | 136..879 | 99 | -> | Plus |
2R | 9586930..9587325 | 880..1275 | 99 | Plus | |
2R | 9585866..9586000 | 1..135 | 98 | -> | Plus |
Translation from 120 to 1190
> FI07665.pep MKDAKPFPVLKNDNLLRAARGEVVDRVPVWVMRQAGRYLPEFQELRKHHD FFTVCRTPELACEVTMQPLRRFDLDASIIFSDILVIPQALGLTVEMHAGV GPVLPQPIVVPEDLKRLTPDGALSRLSYVGDAITMMRHKLEGRVPLIGFT GAPWTLMGYMIEGGGSKTMSKAKAWLNEHPEDSKLFLNLLTDAIVDYLEM QVKAGAQMLQVFESSAEHLSKEQFLQWCVPYLKRIRDELVDRLTKKAIPV VPMTLFAKGAGHSLKEQSELGYDVIGLDWTVDPLEARNLVGPNITLQGNL DPQDMYRDPDELRNLTTEMVHKFGKSRYIANLGHGITPQTPITSMEVLVE AVHKAL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12476-PA | 356 | GF12476-PA | 1..356 | 1..356 | 1804 | 94.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24087-PA | 356 | GG24087-PA | 1..356 | 1..356 | 1868 | 98.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22930-PA | 356 | GH22930-PA | 1..356 | 1..356 | 1716 | 88.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Updo-PA | 356 | CG1818-PA | 1..356 | 1..356 | 1855 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18416-PA | 356 | GI18416-PA | 1..356 | 1..356 | 1723 | 89.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17145-PA | 351 | GL17145-PA | 1..351 | 1..356 | 1752 | 92.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14829-PA | 356 | GA14829-PA | 1..356 | 1..356 | 1796 | 94.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21135-PA | 356 | GM21135-PA | 1..356 | 1..356 | 1890 | 99.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10665-PA | 356 | GD10665-PA | 1..356 | 1..356 | 1890 | 99.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\Updo-PA | 388 | GJ21502-PA | 33..388 | 1..356 | 1721 | 89.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15945-PA | 356 | GK15945-PA | 1..356 | 1..356 | 1760 | 92.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\Updo-PA | 356 | GE19288-PA | 1..356 | 1..356 | 1869 | 99.2 | Plus |
Translation from 120 to 1190
> FI07665.hyp MKDAKPFPVLKNDNLLRAARGEVVDRVPVWVMRQAGRYLPEFQELRKHHD FFTVCRTPELACEVTMQPLRRFDLDASIIFSDILVIPQALGLTVEMHAGV GPVLPQPIVVPEDLKRLTPDGALSRLSYVGDAITMMRHKLEGRVPLIGFT GAPWTLMGYMIEGGGSKTMSKAKAWLNEHPEDSKLFLNLLTDAIVDYLEM QVKAGAQMLQVFESSAEHLSKEQFLQWCVPYLKRIRDELVDRLTKKAIPV VPMTLFAKGAGHSLKEQSELGYDVIGLDWTVDPLEARNLVGPNITLQGNL DPQDMYRDPDELRNLTTEMVHKFGKSRYIANLGHGITPQTPITSMEVLVE AVHKAL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Updo-PA | 356 | CG1818-PA | 1..356 | 1..356 | 1855 | 100 | Plus |