Clone FI07835 Report

Search the DGRC for FI07835

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:78
Well:35
Vector:pOT2
Associated Gene/TranscriptGAPsec-RA
Protein status:FI07835.pep: gold
Sequenced Size:1536

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG5978 2008-08-15 Release 5.9 accounting
CG5978 2008-12-18 5.12 accounting

Clone Sequence Records

FI07835.complete Sequence

1536 bp assembled on 2008-08-14

GenBank Submission: BT044356.1

> FI07835.complete
CAGATTTCACCCAGCATAAAACTGAGATAAAGCTTTAATTAATTACACAT
AGGGGTACTGCAAGATCTCAGCATAGCCCCGCCCACATAAAGCCGCAGCA
TGTCTATTTTCAAGGCGCGAGTCAAGGAATTTGAGGATGTTTTGGCGGGG
CCACAGGATTTAATTGACCTGAAACAACTCAGGAAACTGGCATTTAATGG
TGTGCCCGATGTGCAGAGTTTTCGAGCACTCAGTTGGAAGCTACTCCTTG
GCTATTTGGGGCCTAGGCGCAGTAGTTGGACCACAACCTTGGCCCAAAAG
CGAGCCCTGTATAAACAGTTCATCGAGGAGCTAGTCCTGCCCCCCGGACA
CTCGAGCAATAGAGCTAGCGTAGACGGAGGAGATGGGGACAAAGTCGATT
CGGGGGGCGTTGGCCTGCAAGATCATCCGCTGAGCGAGGGACCCGAAAGC
GCGTGGAACACGTTCTTCAATGATAACGAGTTTCTACTGCAAATCGACAA
GGATGTCCGCCGCTTGTGCCCGGACATATCCTTTTTCCAGCAGCCCACCG
ATTATCCCTGCGAGATTGTGGTCCACAGCAAAGGAGAGCATGGACGAAGG
CTCCACGAACGGGTGGTTCCCGCCGTTCTAAGTTCGGCGAATGTGGAACG
CAAGGGCCTCGGCATGACAAAGATAAATTTGATTACAAAACGCTCCGTTG
AAAACTATGCCGCCATGGAGGAGGGCCAAGAGGCTCACTGGGAAGTTGTG
CAACGCATTTTGTTCATCTATGCCAAACTAAATCCCGGCCAGGGATATGT
CCAGGGCATGAACGAAATCGTGGGACCCATTTACTATGTTATGGCCTCCG
ATCCTGACCTCACATATCGCGCCCACGCTGAGGCTGATTGTTTCTTTTGT
TTTACCGCCCTGATGAGCGAGATAAGAGACTTTTTTATTAAAACACTAGA
CGACGCAGAAGGCGGCATCAAGTTCATGATGGCCAGGCTATCGAATATGC
TGAAATCAAAGGACCTAAGCATTTACGAGCTACTCAGGAGCCAAGAGCTG
CATCCGCAGTATTACAGCTTCAGGTGGCTCACACTGCTCCTGTCGCAGGA
GTTTCCACTGCCAGATGTACTGCGCATTTGGGATTCCGTGTTTGCGGACG
AACAGCGATTTGATTTTCTGATAAAAATATGCTGTTCAATGATATTAATC
CAAAGGGAAGCAATTTTGGAAAACGACTTTGCCTCGAATGTGAAACTCTT
GCAAAACTATCCGCCAATTGACATTAATGTTGTGATTGCTCATGCCGGAT
CATTGGCGTAGCATTCCTCCAGAAATATATCCTTGTGCCCAAATGCTTGC
AAAGCCCCCTAGTTAGTTTAACAACTGAAAGAACCAAGCAATCAACTATA
CTTTAGTTAGCCCCAATCTTGGAAACGCACCCTTACAGGAAGTCCAATAA
GTACACGCATTTTCACTTTTTTACATGACTTATAATTTGTATGTCATTAA
TAAACGAATTAATTTTAAAAAAAAAAAAAAAAAAAA

FI07835.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:06:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG5978-RA 1562 CG5978-RA 47..1562 1..1516 7580 100 Plus
CG32351-RA 2093 CG32351-RA 2039..2093 1518..1464 275 100 Minus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 17:31:23
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 8614436..8614961 1196..671 2630 100 Minus
chr3L 24539361 chr3L 8615102..8615575 672..199 2370 100 Minus
chr3L 24539361 chr3L 8614064..8614383 1516..1197 1600 100 Minus
chr3L 24539361 chr3L 8615780..8615898 119..1 595 100 Minus
chr3L 24539361 chr3L 8615631..8615713 201..119 415 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:19:38 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 17:31:21
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 8622411..8622936 1196..671 2630 100 Minus
3L 28110227 3L 8623077..8623550 672..199 2370 100 Minus
3L 28110227 3L 8622037..8622358 1518..1197 1610 100 Minus
3L 28110227 3L 8623755..8623873 119..1 595 100 Minus
3L 28110227 3L 8623606..8623688 201..119 415 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:24:20
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 8615511..8616036 1196..671 2630 100 Minus
3L 28103327 3L 8616177..8616650 672..199 2370 100 Minus
3L 28103327 3L 8615137..8615458 1518..1197 1610 100 Minus
3L 28103327 3L 8616855..8616973 119..1 595 100 Minus
3L 28103327 3L 8616706..8616788 201..119 415 100 Minus
Blast to na_te.dros performed on 2019-03-15 17:31:21 has no hits.

FI07835.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 17:32:01 Download gff for FI07835.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 8614064..8614383 1197..1516 100 <- Minus
chr3L 8614436..8614959 673..1196 100 <- Minus
chr3L 8615102..8615574 200..672 100 <- Minus
chr3L 8615633..8615712 120..199 100 <- Minus
chr3L 8615780..8615898 1..119 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:56:54 Download gff for FI07835.complete
Subject Subject Range Query Range Percent Splice Strand
CG5978-RA 1..1212 100..1311 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:08:53 Download gff for FI07835.complete
Subject Subject Range Query Range Percent Splice Strand
CG5978-RA 1..1212 100..1311 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:39:03 Download gff for FI07835.complete
Subject Subject Range Query Range Percent Splice Strand
GAPsec-RA 1..1212 100..1311 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-09-08 12:19:02 Download gff for FI07835.complete
Subject Subject Range Query Range Percent Splice Strand
CG5978-RA 1..1212 100..1311 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:40:17 Download gff for FI07835.complete
Subject Subject Range Query Range Percent Splice Strand
GAPsec-RA 1..1212 100..1311 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:36:03 Download gff for FI07835.complete
Subject Subject Range Query Range Percent Splice Strand
CG5978-RA 18..1533 1..1516 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:08:53 Download gff for FI07835.complete
Subject Subject Range Query Range Percent Splice Strand
CG5978-RA 18..1533 1..1516 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:39:03 Download gff for FI07835.complete
Subject Subject Range Query Range Percent Splice Strand
GAPsec-RA 29..1544 1..1516 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-14 11:29:00 Download gff for FI07835.complete
Subject Subject Range Query Range Percent Splice Strand
CG5978-RA 18..1533 1..1516 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:40:17 Download gff for FI07835.complete
Subject Subject Range Query Range Percent Splice Strand
GAPsec-RA 29..1544 1..1516 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:32:01 Download gff for FI07835.complete
Subject Subject Range Query Range Percent Splice Strand
3L 8622039..8622358 1197..1516 100 <- Minus
3L 8622411..8622934 673..1196 100 <- Minus
3L 8623077..8623549 200..672 100 <- Minus
3L 8623608..8623687 120..199 100 <- Minus
3L 8623755..8623873 1..119 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:32:01 Download gff for FI07835.complete
Subject Subject Range Query Range Percent Splice Strand
3L 8622039..8622358 1197..1516 100 <- Minus
3L 8622411..8622934 673..1196 100 <- Minus
3L 8623077..8623549 200..672 100 <- Minus
3L 8623608..8623687 120..199 100 <- Minus
3L 8623755..8623873 1..119 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:32:01 Download gff for FI07835.complete
Subject Subject Range Query Range Percent Splice Strand
3L 8622039..8622358 1197..1516 100 <- Minus
3L 8622411..8622934 673..1196 100 <- Minus
3L 8623077..8623549 200..672 100 <- Minus
3L 8623608..8623687 120..199 100 <- Minus
3L 8623755..8623873 1..119 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:39:03 Download gff for FI07835.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 8615139..8615458 1197..1516 100 <- Minus
arm_3L 8615511..8616034 673..1196 100 <- Minus
arm_3L 8616177..8616649 200..672 100 <- Minus
arm_3L 8616708..8616787 120..199 100 <- Minus
arm_3L 8616855..8616973 1..119 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:38:33 Download gff for FI07835.complete
Subject Subject Range Query Range Percent Splice Strand
3L 8615139..8615458 1197..1516 100 <- Minus
3L 8615511..8616034 673..1196 100 <- Minus
3L 8616177..8616649 200..672 100 <- Minus
3L 8616708..8616787 120..199 100 <- Minus
3L 8616855..8616973 1..119 100   Minus

FI07835.pep Sequence

Translation from 99 to 1310

> FI07835.pep
MSIFKARVKEFEDVLAGPQDLIDLKQLRKLAFNGVPDVQSFRALSWKLLL
GYLGPRRSSWTTTLAQKRALYKQFIEELVLPPGHSSNRASVDGGDGDKVD
SGGVGLQDHPLSEGPESAWNTFFNDNEFLLQIDKDVRRLCPDISFFQQPT
DYPCEIVVHSKGEHGRRLHERVVPAVLSSANVERKGLGMTKINLITKRSV
ENYAAMEEGQEAHWEVVQRILFIYAKLNPGQGYVQGMNEIVGPIYYVMAS
DPDLTYRAHAEADCFFCFTALMSEIRDFFIKTLDDAEGGIKFMMARLSNM
LKSKDLSIYELLRSQELHPQYYSFRWLTLLLSQEFPLPDVLRIWDSVFAD
EQRFDFLIKICCSMILIQREAILENDFASNVKLLQNYPPIDINVVIAHAG
SLA*

FI07835.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 01:56:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF10155-PA 400 GF10155-PA 1..400 1..403 1976 91.6 Plus
Dana\GF16495-PA 538 GF16495-PA 318..523 215..402 260 31.3 Plus
Dana\GF17397-PA 652 GF17397-PA 56..392 25..399 255 23.3 Plus
Dana\GF20733-PA 712 GF20733-PA 458..605 216..377 171 24.7 Plus
Dana\GF11873-PA 1103 GF11873-PA 329..446 220..347 165 34.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 01:56:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG15068-PA 403 GG15068-PA 1..403 1..403 2137 98.8 Plus
Dere\GG17068-PA 654 GG17068-PA 58..396 23..399 262 23.5 Plus
Dere\GG24343-PA 546 GG24343-PA 326..528 215..399 259 31.7 Plus
Dere\GG24704-PA 715 GG24704-PA 444..608 196..377 169 23.1 Plus
Dere\GG22359-PA 1100 GG22359-PA 324..441 220..347 167 34.1 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 01:56:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH22515-PA 396 GH22515-PA 1..396 1..403 1859 85.9 Plus
Dgri\GH19149-PA 682 GH19149-PA 76..413 27..399 276 24.9 Plus
Dgri\GH18254-PA 547 GH18254-PA 327..529 215..399 260 31.7 Plus
Dgri\GH11542-PA 713 GH11542-PA 444..608 196..377 167 25.8 Plus
Dgri\GH21458-PA 1136 GH21458-PA 318..435 220..347 166 34.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:23:09
Subject Length Description Subject Range Query Range Score Percent Strand
GAPsec-PA 403 CG5978-PA 1..403 1..403 2103 100 Plus
TBC1D5-PA 654 CG8449-PA 58..396 23..399 283 25.3 Plus
CG5745-PA 546 CG5745-PA 321..528 210..399 248 31.5 Plus
Tbc1d15-17-PC 715 CG11490-PC 444..579 196..348 168 25.5 Plus
Tbc1d15-17-PB 715 CG11490-PB 444..579 196..348 168 25.5 Plus
Tbc1d15-17-PA 715 CG11490-PA 444..579 196..348 168 25.5 Plus
CG8155-PA 1098 CG8155-PA 300..441 194..347 165 32.9 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 01:56:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI12417-PA 398 GI12417-PA 1..398 1..403 1893 87.8 Plus
Dmoj\GI23653-PA 555 GI23653-PA 335..537 215..399 260 31.4 Plus
Dmoj\GI23257-PA 608 GI23257-PA 21..359 23..399 259 24.4 Plus
Dmoj\GI17031-PA 707 GI17031-PA 458..577 216..349 167 27.6 Plus
Dmoj\GI19936-PA 1138 GI19936-PA 326..446 220..350 166 34.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 01:56:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL10295-PA 402 GL10295-PA 1..402 1..403 1939 91.1 Plus
Dper\GL16623-PA 294 GL16623-PA 1..269 1..319 1029 67.1 Plus
Dper\GL15616-PA 267 GL15616-PA 1..230 1..291 977 69.2 Plus
Dper\GL19703-PA 263 GL19703-PA 1..226 1..291 909 66.4 Plus
Dper\GL15098-PA 189 GL15098-PA 1..181 1..182 801 86.3 Plus
Dper\GL15616-PA 267 GL15616-PA 216..267 355..403 178 76.9 Plus
Dper\GL19703-PA 263 GL19703-PA 225..263 365..403 177 92.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 01:56:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA28668-PB 404 GA28668-PB 1..404 1..403 1934 91.1 Plus
Dpse\GA23318-PA 381 GA23318-PA 11..381 34..403 1705 88.4 Plus
Dpse\GA24990-PA 219 GA24990-PA 7..219 190..403 943 84.1 Plus
Dpse\GA24054-PA 170 GA24054-PA 1..170 234..403 792 87.6 Plus
Dpse\GA22207-PA 166 GA22207-PA 1..166 237..403 761 86.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 01:56:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM24925-PA 403 GM24925-PA 1..403 1..403 2120 98.5 Plus
Dsec\GM15063-PA 547 GM15063-PA 327..529 215..399 260 31.7 Plus
Dsec\GM25953-PA 652 GM25953-PA 58..396 23..399 259 25.5 Plus
Dsec\GM20144-PA 1094 GM20144-PA 320..437 220..347 170 34.8 Plus
Dsec\GM15469-PA 320 GM15469-PA 58..167 23..149 168 32.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 01:56:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD12972-PA 225 GD12972-PA 1..201 1..201 1050 98.5 Plus
Dsim\GD12973-PA 132 GD12973-PA 1..132 272..403 694 100 Plus
Dsim\GD19395-PA 547 GD19395-PA 327..529 215..399 260 31.7 Plus
Dsim\GD20513-PA 586 GD20513-PA 58..396 23..399 256 25.3 Plus
Dsim\GD25623-PA 1098 GD25623-PA 324..441 220..347 170 34.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 01:56:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ12310-PA 396 GJ12310-PA 1..396 1..403 1888 87.8 Plus
Dvir\GJ10753-PA 616 GJ10753-PA 25..362 27..399 266 25 Plus
Dvir\GJ23497-PA 536 GJ23497-PA 316..518 215..399 262 31.9 Plus
Dvir\GJ24624-PA 705 GJ24624-PA 456..575 216..349 172 28.4 Plus
Dvir\GJ15104-PA 1128 GJ15104-PA 318..438 220..350 167 34.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 01:56:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK25595-PA 399 GK25595-PA 1..399 1..403 1880 86.4 Plus
Dwil\GK14182-PA 547 GK14182-PA 326..528 215..399 264 32.2 Plus
Dwil\GK22770-PA 669 GK22770-PA 49..407 9..399 261 25.5 Plus
Dwil\GK18203-PA 727 GK18203-PA 457..593 196..349 168 26.6 Plus
Dwil\GK20751-PA 1113 GK20751-PA 324..441 220..347 167 34.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 01:56:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE21292-PA 403 GE21292-PA 1..403 1..403 2114 97.5 Plus
Dyak\GE24458-PA 652 GE24458-PA 58..396 23..399 262 23.5 Plus
Dyak\GE25705-PA 546 GE25705-PA 326..528 215..399 259 31.7 Plus
Dyak\GE16659-PA 715 GE16659-PA 444..580 196..349 167 24.7 Plus
Dyak\GE12247-PA 1100 GE12247-PA 324..441 220..347 167 34.1 Plus

FI07835.hyp Sequence

Translation from 99 to 1310

> FI07835.hyp
MSIFKARVKEFEDVLAGPQDLIDLKQLRKLAFNGVPDVQSFRALSWKLLL
GYLGPRRSSWTTTLAQKRALYKQFIEELVLPPGHSSNRASVDGGDGDKVD
SGGVGLQDHPLSEGPESAWNTFFNDNEFLLQIDKDVRRLCPDISFFQQPT
DYPCEIVVHSKGEHGRRLHERVVPAVLSSANVERKGLGMTKINLITKRSV
ENYAAMEEGQEAHWEVVQRILFIYAKLNPGQGYVQGMNEIVGPIYYVMAS
DPDLTYRAHAEADCFFCFTALMSEIRDFFIKTLDDAEGGIKFMMARLSNM
LKSKDLSIYELLRSQELHPQYYSFRWLTLLLSQEFPLPDVLRIWDSVFAD
EQRFDFLIKICCSMILIQREAILENDFASNVKLLQNYPPIDINVVIAHAG
SLA*

FI07835.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:37:12
Subject Length Description Subject Range Query Range Score Percent Strand
GAPsec-PA 403 CG5978-PA 1..403 1..403 2103 100 Plus
CG8449-PA 654 CG8449-PA 58..396 23..399 283 25.3 Plus
CG5745-PA 546 CG5745-PA 321..528 210..399 248 31.5 Plus
Tbc1d15-17-PC 715 CG11490-PC 444..579 196..348 168 25.5 Plus
Tbc1d15-17-PB 715 CG11490-PB 444..579 196..348 168 25.5 Plus