Clone FI07905 Report

Search the DGRC for FI07905

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:79
Well:5
Vector:pOT2
Associated Gene/TranscriptFad2-RA
Protein status:FI07905.pep: gold
Sequenced Size:1348

Clone Sequence Records

FI07905.complete Sequence

1348 bp assembled on 2009-05-14

GenBank Submission: BT083444.1

> FI07905.complete
CACCATGCCACGCAATACCAAAGACACCACCGGAGTGCTTTACGAATCCG
ATGTCGAGACAGTAGACGGTGGATTGTCGACGGAGCTAAGCAATCGGAAG
ACCACCGATGGAAGTAAACTGGAGTTGGTATGGGTCAATATAGTGCTGTT
CGTGATCCTTCACATATCTTCGCTATATGGAGTCTGGCTGCTCTTCACTT
CGGCCACGTGGACAACGGTCGTGCTCTTTTGGCCAACGGTTGTGGTGACC
ATTTTGGGAGTTTCCGGCGGTGCCCATCGTTTGTGGGCTCATCGCACATT
CAAGGCGAATACACCGCTCAAGCTGATCTTTTTGTTCCTGAACACTTTGG
CCTTTCAGGATGCGGTCTACTATTGGGCCCGGGATCATCGCGTCCACCAC
AAGTATACGGAAACTGATGCGGATCCGTACAATTCGCAACGTGGTTGGTT
CTTTGCCCACATCGGTTGGTTGTGCTGCCGCAAGCATCCGGAGGTTGTGG
AGAAGGGCAAGCAAATAGATCTATCCGATCTGGAGGCAGATCCACTGATC
ATGTTCCAGAAGAAATACTACCTGCTGCTAATGCCAATCATTTGCTTTGT
CCTGCCCACCGTTTTGCCCATGTATCTGTGGGGCGAATCACTCAATGTGT
CCTGGCACGTGATGGCCCTGCTTCGATGGTGCCTCAGTCTCAATCTCATC
TGGACGGTCAATAGCTCGGCCCACATGCACGGCATGCGGCCTTACGACAA
GAACATATGTCCAGTCGATCAGGGCTTCCTCATATTTTTCCGTGTGGGTG
AGGGATACCACAACTACCACCATGTCTTTCCCTGGGACTACAAGAGCGCC
GAGCTGGGCAAGTATTCGCAGGATGTGACCACCAAGTTTATCGAATTCAT
GGCCTATTTGGGTTGGGCCTACGATCTAAAGAGTGTCTCACTGGATTTGG
TCAAGCAGCGAGTCCAGCGCTCTGGCGATGGATCACATCCTGTTTGGGGT
TGGGGCGATAAGGATCAATTAAAGGAGGACGTGGGCGTGACCACCATTAC
CCACCAGCGAAATGAAAAGTAAAAGACGGACTACTTGAAGACATTATCTA
GACATCTAGGGCATCAATAGGCATAATGAAAACGAATGGTTGCGTTTCCT
TGCAATTCGAATTAGGAATTGAATTGTTGCTCGACTTTGATATAACCCAC
TGACTTTGTTTTTTAATTATATACTGCTTTATTATTAGTACTAAAATGTA
AAAAAAAAATACTAATCATATACACTACTGTTTTTACCGAAATAAATGAG
ATAACTTTCTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

FI07905.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:26:47
Subject Length Description Subject Range Query Range Score Percent Strand
Fad2-RA 1312 Fad2-RA 1..1312 1..1312 6560 100 Plus
desat1-RE 1956 desat1-RE 715..836 503..624 205 77.8 Plus
desat1-RB 1978 desat1-RB 737..858 503..624 205 77.8 Plus
desat1-RE 1956 desat1-RE 562..638 350..426 190 83.1 Plus
desat1-RB 1978 desat1-RB 584..660 350..426 190 83.1 Plus
desat1-RE 1956 desat1-RE 1012..1081 800..869 170 82.8 Plus
desat1-RB 1978 desat1-RB 1034..1103 800..869 170 82.8 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 00:41:32
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 11014423..11015734 1..1312 6455 99.5 Plus
chr3R 27901430 chr3R 8262147..8262318 255..426 275 77.3 Plus
chr3R 27901430 chr3R 8271390..8271690 264..564 260 72.4 Plus
chr3R 27901430 chr3R 9108679..9108739 800..860 185 86.9 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:19:42 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 00:41:30
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 11023535..11024854 1..1320 6585 99.9 Plus
3R 32079331 3R 12446014..12446314 264..564 290 73.1 Plus
3R 32079331 3R 12436761..12436932 255..426 275 77.3 Plus
3R 32079331 3R 13283528..13283588 800..860 185 86.9 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:21:14
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 11016635..11017954 1..1320 6585 99.9 Plus
3R 31820162 3R 12177687..12177763 350..426 265 89.6 Plus
3R 31820162 3R 12186931..12187007 350..426 190 83.1 Plus
3R 31820162 3R 12187503..12187572 800..869 170 82.8 Plus
3R 31820162 3R 12187084..12187145 503..564 145 82.2 Plus
Blast to na_te.dros performed 2019-03-16 00:41:30
Subject Length Description Subject Range Query Range Score Percent Strand
HMS-Beagle 7062 HMS-Beagle Beagle 7062bp 1055..1205 1160..1312 120 55.8 Plus

FI07905.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 00:42:25 Download gff for FI07905.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 11014423..11015734 1..1312 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 17:53:54 Download gff for FI07905.complete
Subject Subject Range Query Range Percent Splice Strand
Fad2-RA 1..1068 5..1072 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 13:52:40 Download gff for FI07905.complete
Subject Subject Range Query Range Percent Splice Strand
Fad2-RA 1..1068 5..1072 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:37:31 Download gff for FI07905.complete
Subject Subject Range Query Range Percent Splice Strand
Fad2-RA 1..1068 5..1072 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 04:09:54 Download gff for FI07905.complete
Subject Subject Range Query Range Percent Splice Strand
Fad2-RA 1..1068 5..1072 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-15 08:56:44 Download gff for FI07905.complete
Subject Subject Range Query Range Percent Splice Strand
Fad2-RA 1..1312 1..1312 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 13:52:40 Download gff for FI07905.complete
Subject Subject Range Query Range Percent Splice Strand
Fad2-RA 1..1312 1..1312 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:37:31 Download gff for FI07905.complete
Subject Subject Range Query Range Percent Splice Strand
Fad2-RA 1..1312 1..1312 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 04:09:54 Download gff for FI07905.complete
Subject Subject Range Query Range Percent Splice Strand
Fad2-RA 1..1312 1..1312 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 00:42:25 Download gff for FI07905.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11023535..11024846 1..1312 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 00:42:25 Download gff for FI07905.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11023535..11024846 1..1312 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 00:42:25 Download gff for FI07905.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11023535..11024846 1..1312 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:37:31 Download gff for FI07905.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 11016635..11017946 1..1312 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 11:43:30 Download gff for FI07905.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11016635..11017946 1..1312 100   Plus

FI07905.hyp Sequence

Translation from 1 to 1071

> FI07905.hyp
TMPRNTKDTTGVLYESDVETVDGGLSTELSNRKTTDGSKLELVWVNIVLF
VILHISSLYGVWLLFTSATWTTVVLFWPTVVVTILGVSGGAHRLWAHRTF
KANTPLKLIFLFLNTLAFQDAVYYWARDHRVHHKYTETDADPYNSQRGWF
FAHIGWLCCRKHPEVVEKGKQIDLSDLEADPLIMFQKKYYLLLMPIICFV
LPTVLPMYLWGESLNVSWHVMALLRWCLSLNLIWTVNSSAHMHGMRPYDK
NICPVDQGFLIFFRVGEGYHNYHHVFPWDYKSAELGKYSQDVTTKFIEFM
AYLGWAYDLKSVSLDLVKQRVQRSGDGSHPVWGWGDKDQLKEDVGVTTIT
HQRNEK*

FI07905.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:37:25
Subject Length Description Subject Range Query Range Score Percent Strand
Fad2-PA 355 CG7923-PA 1..355 2..356 1945 100 Plus
Desat1-PD 383 CG5887-PD 35..383 7..355 1207 58.5 Plus
Desat1-PB 383 CG5887-PB 35..383 7..355 1207 58.5 Plus
Desat1-PE 383 CG5887-PE 35..383 7..355 1207 58.5 Plus
Desat1-PC 383 CG5887-PC 35..383 7..355 1207 58.5 Plus

FI07905.pep Sequence

Translation from 1 to 1071

> FI07905.pep
TMPRNTKDTTGVLYESDVETVDGGLSTELSNRKTTDGSKLELVWVNIVLF
VILHISSLYGVWLLFTSATWTTVVLFWPTVVVTILGVSGGAHRLWAHRTF
KANTPLKLIFLFLNTLAFQDAVYYWARDHRVHHKYTETDADPYNSQRGWF
FAHIGWLCCRKHPEVVEKGKQIDLSDLEADPLIMFQKKYYLLLMPIICFV
LPTVLPMYLWGESLNVSWHVMALLRWCLSLNLIWTVNSSAHMHGMRPYDK
NICPVDQGFLIFFRVGEGYHNYHHVFPWDYKSAELGKYSQDVTTKFIEFM
AYLGWAYDLKSVSLDLVKQRVQRSGDGSHPVWGWGDKDQLKEDVGVTTIT
HQRNEK*

FI07905.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 16:45:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF16174-PA 355 GF16174-PA 1..354 2..355 1564 80.5 Plus
Dana\GF24026-PA 355 GF24026-PA 1..353 2..354 1474 74.5 Plus
Dana\GF18504-PA 352 GF18504-PA 1..352 2..351 1297 65.3 Plus
Dana\GF17961-PA 383 GF17961-PA 35..383 7..355 1187 57.6 Plus
Dana\GF17959-PA 374 GF17959-PA 22..364 1..344 1078 54.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 16:45:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG15465-PA 354 GG15465-PA 1..353 2..354 1671 85.3 Plus
Dere\GG18949-PA 383 GG18949-PA 35..383 7..355 1201 59 Plus
Dere\GG19533-PA 407 GG19533-PA 58..403 39..355 910 46 Plus
Dere\GG11952-PA 419 GG11952-PA 99..411 41..344 768 46.2 Plus
Dere\GG11954-PA 461 GG11954-PA 107..418 42..351 724 44.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 16:45:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH21229-PA 384 GH21229-PA 36..384 7..355 1190 58.5 Plus
Dgri\GH21218-PA 382 GH21218-PA 36..369 10..343 1097 57.5 Plus
Dgri\GH18426-PA 414 GH18426-PA 62..410 39..355 923 47.3 Plus
Dgri\GH18422-PA 422 GH18422-PA 102..414 41..344 768 45.5 Plus
Dgri\GH18424-PA 475 GH18424-PA 116..407 39..329 736 45.4 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:34:26
Subject Length Description Subject Range Query Range Score Percent Strand
Fad2-PA 355 CG7923-PA 1..355 2..356 1945 100 Plus
Desat1-PD 383 CG5887-PD 35..383 7..355 1207 58.5 Plus
Desat1-PB 383 CG5887-PB 35..383 7..355 1207 58.5 Plus
Desat1-PE 383 CG5887-PE 35..383 7..355 1207 58.5 Plus
Desat1-PC 383 CG5887-PC 35..383 7..355 1207 58.5 Plus
Desat1-PA 383 CG5887-PA 35..383 7..355 1207 58.5 Plus
Desat2-PA 361 CG5925-PA 17..350 10..343 1134 56.9 Plus
CG8630-PA 408 CG8630-PA 59..404 39..355 925 46.8 Plus
CG9743-PA 420 CG9743-PA 100..412 41..344 788 45.6 Plus
CG9747-PB 461 CG9747-PB 107..418 42..351 769 44.8 Plus
CG9747-PA 461 CG9747-PA 107..418 42..351 769 44.8 Plus
CG15531-PA 334 CG15531-PA 19..307 39..331 478 34.5 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 16:45:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI10485-PA 384 GI10485-PA 36..384 7..355 1214 59.6 Plus
Dmoj\GI10484-PA 367 GI10484-PA 22..355 10..343 1110 58.4 Plus
Dmoj\GI24327-PA 424 GI24327-PA 74..420 39..355 925 48.7 Plus
Dmoj\GI24323-PA 418 GI24323-PA 96..411 39..345 785 46.1 Plus
Dmoj\GI24325-PA 469 GI24325-PA 117..404 42..329 736 45.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 16:45:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL15669-PA 353 GL15669-PA 1..347 2..352 1404 72 Plus
Dper\GL23117-PA 362 GL23117-PA 16..362 8..356 1335 67.9 Plus
Dper\GL22317-PA 361 GL22317-PA 13..361 6..356 1281 64.4 Plus
Dper\GL27316-PA 383 GL27316-PA 35..383 7..355 1161 57.3 Plus
Dper\GL27314-PA 380 GL27314-PA 26..380 1..355 1111 54.4 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 16:45:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\DesatF-alpha-PA 353 GA20691-PA 1..347 2..352 1403 72 Plus
Dpse\DesatF-beta-PA 362 GA27148-PA 16..362 8..356 1323 67 Plus
Dpse\DesatF-gamma-PA 361 GA27452-PA 13..361 6..356 1281 64.4 Plus
Dpse\Desat1-PA 383 GA19204-PA 29..383 1..355 1162 56.3 Plus
Dpse\Desat2-PA 380 GA19234-PA 26..380 1..355 1112 54.4 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 16:45:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM25238-PA 354 GM25238-PA 1..354 2..356 1771 93.2 Plus
Dsec\GM24035-PA 361 GM24035-PA 17..351 10..344 1098 55.8 Plus
Dsec\GM24036-PA 402 GM24036-PA 35..312 7..284 953 59 Plus
Dsec\GM24094-PA 408 GM24094-PA 59..404 39..355 917 46.8 Plus
Dsec\GM12168-PA 420 GM12168-PA 100..412 41..344 765 46.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 16:45:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD14271-PA 355 GD14271-PA 1..355 2..356 1775 92.4 Plus
Dsim\Fad-PA 383 GD18837-PA 35..383 7..355 1191 58.5 Plus
Dsim\desat2-PA 361 GD18836-PA 12..351 5..344 1109 55 Plus
Dsim\GD18893-PA 408 GD18893-PA 59..404 39..355 917 46.8 Plus
Dsim\GD17212-PA 420 GD17212-PA 100..412 41..344 764 46.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 16:45:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ23166-PA 384 GJ23166-PA 36..384 7..355 1204 58.7 Plus
Dvir\GJ23165-PA 381 GJ23165-PA 32..370 6..344 1064 54.6 Plus
Dvir\GJ10413-PA 420 GJ10413-PA 71..413 41..352 917 48.4 Plus
Dvir\GJ10408-PA 422 GJ10408-PA 62..415 7..345 765 41.9 Plus
Dvir\GJ10410-PA 466 GJ10410-PA 111..402 39..329 726 43.7 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 16:45:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK17186-PA 363 GK17186-PA 1..363 2..355 1334 67.5 Plus
Dwil\GK14407-PA 383 GK14407-PA 35..383 7..355 1204 59.9 Plus
Dwil\GK11373-PA 357 GK11373-PA 14..349 8..343 1140 58 Plus
Dwil\GK14406-PA 374 GK14406-PA 24..371 5..352 1125 54.6 Plus
Dwil\GK13932-PA 415 GK13932-PA 53..411 26..355 916 46.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 16:45:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE21776-PA 340 GE21776-PA 1..340 2..355 1541 83.1 Plus
Dyak\desat1-PA 383 GE26198-PA 35..383 7..355 1194 59 Plus
Dyak\GE26197-PA 358 GE26197-PA 9..358 5..354 1134 54.9 Plus
Dyak\GE26257-PA 408 GE26257-PA 59..404 39..355 918 46.5 Plus
Dyak\GE23401-PA 422 GE23401-PA 102..414 41..344 758 45.9 Plus