Clone FI07970 Report

Search the DGRC for FI07970

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:79
Well:70
Vector:pOT2
Associated Gene/TranscriptCG5346-RA
Protein status:FI07970.pep: gold
Sequenced Size:1938

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG5346 2008-08-15 Release 5.9 accounting
CG5346 2008-12-18 5.12 accounting

Clone Sequence Records

FI07970.complete Sequence

1938 bp assembled on 2008-08-14

GenBank Submission: BT044357.1

> FI07970.complete
CTGGATCCGAATCCACCGAAGATCGCGGATCGGATCGCAAATGTTTTTTT
TTTGAGACAGACGCCGTTGCTCTCTGCGCTAGTTCAGGTGTATCTGGGTT
AAATTCGCGATCGGAGTGTGTTACAAAATGATGGAAAGTGTGCAAAAAAA
GCAGCAGAAAGCGATACGAAAATTGACTAACTAGACTGTTGGCCAACTGC
TGTTCGTTCGGGTCGGGTGTTCGATGAAAAGCGAAACCTGTGCGAAAAAA
GAAAGCGAGTTTTCACTTTTCATTTAGTCAGCCATCGCTGGAAGTGCACC
TCGTCTCCGGATCCCGGATCCTCTCCGGTACCCAGAGTCCCCCCTCATCG
AATTGTGATAAAGATATAGCGAGCACAAGTGCGGCGAGTGTTCGATTGCT
CTCCCCAATCAGAAACCAAAGAACTTTGGACGTCGAAGACCCTCTGGAAG
TCGCTCGAAGCACAAACACCAACTCAAAATGATAAAAACAAAGAGCAGCG
ACGACAAACTCGACACGCTCCTCTCGCGCAGCGTGGTTCCGATCATCGAT
CTCGCCCACTGTGGCATCGAGGAGGTGCCGGTCAAGTCGGTGGTCAACCG
CGTGGGTCACCAGCTGAAGAAAGCGCTCTCCGAGAAGGGCATGGCCCTGC
TGGTCAACCATGGCATCTCCGATGAGAAGCTCAAGACTGCCTGGGATCAC
CTGGATGACTTCGTGAATCTGCCGCCGGACATCCGACAGCACTATATCCG
TGCCGATGGAGACAAACATGGCTACGTGAGTCGTGGTCAGCAGCAGCGAT
TCGATGGCAAGTCGCCGGAGCTGCGTCACGCTTTCAATATCAGCACACTG
AACGCTCAGAATCTGCCAGAGGAGCCGCTGCCAGGATTTGCGGACCACAT
CAGCACCCTGGCCACGGACTTCAAGGCGCTGGCCAGCTTTATACTGCAGG
CGCTGGCCGTCTCCCTGGACATTCCGCACACGTTCTTCCTCGAAAAGCAC
TCGCACATGCTGTCCGGCGACCACGACAACATGAGCTCCCTGCGCATGCT
CTACTATCCGCCCATAGTGGACGACGAGCCCGGCCAGAACGACGTGATCA
AGGGTCGCTGCCAGTACAGCTACCAGCGCTGTCTGTCCAACCAGCCAGAT
TTCCGGCCGGAGCACAATCCCCGCGACGAGGACGACCTCAACGAGGTGGA
TGGGCCCAATGGCCAATTGTTCGAGCACAAGCTGGGCAACGGCGCCGTCA
TCCAGTGTCCACCACACGTGGACTACGGCACCTTCACCCTGCTCTCCCAG
GACTCGGAGGGCGGACTGGAGGTGAGGCTGCCCGGCAGCGAAAAGTGGAA
TCGCGTGGGCCACCTGCCCGGCTCCATACTCGTCAACTGTGGCGAGATCT
TAAATATCTGGACACAGGGACGATATCCGGCATTGCAACATCGCGTGATA
ATACCGGAGCAGGAAACTATTCGGGCTCGTGGCCGCCACTCGATAGCGTT
CTTCTGCCATCCGGACAACATCACCACGATATCGCCCACCGATCTGCCCA
ATCCAGATGCCGTCCAGGACAAGGCGTGTCTCAAGCAGCGCAAGAAGTCC
TTCAAGGCGGCGAAAGAAAGAGTCTACAATGCCTATCAGTTGATACAGAA
AAAGTTTAGAGATACGTATAGCAGTAACAATCACTCATAAGCAGTAACAA
CCATAGACCATAGTTGGTCGAGCCATCCATCGCATCTCTACCTGAACTGG
GATGAAGTTCGTCGTGGGAACGGATGGGGAAAATGAAAAGCAGCAACTCA
TATGATGATGTTTTGAACCTTTTTATTATTACCTTTACTTTTATTCCATA
CGATTGTAATTGCTTCATTTCATTAATTTATATGTATCGAGATACTATAT
ACAATACATGCATACACCGTAAAAAAAAAAAAAAAAAA

FI07970.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:05:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG5346-RA 2004 CG5346-RA 22..1943 1..1923 9485 99.6 Plus
CG5346.c 4343 CG5346.c 22..1943 1..1923 9485 99.6 Plus
CG5346.b 3118 CG5346.b 22..1943 1..1923 9485 99.6 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 09:40:44
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 18344594..18345351 1435..678 3775 99.9 Minus
chr3R 27901430 chr3R 18343646..18343947 1920..1619 1510 100 Minus
chr3R 27901430 chr3R 18350340..18350636 564..268 1470 99.7 Minus
chr3R 27901430 chr3R 18351949..18352215 267..1 1335 100 Minus
chr3R 27901430 chr3R 18344063..18344248 1620..1435 930 100 Minus
chr3R 27901430 chr3R 18345593..18345709 679..563 585 100 Minus
chr3R 27901430 chr3R 18353009..18353100 1359..1268 205 81.5 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:19:45 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 09:40:42
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 22521035..22521792 1435..678 3790 100 Minus
3R 32079331 3R 22520084..22520388 1923..1619 1465 98.7 Minus
3R 32079331 3R 22526787..22527083 564..268 1455 99.3 Minus
3R 32079331 3R 22528396..22528661 267..1 1285 99.6 Minus
3R 32079331 3R 22520504..22520689 1620..1435 930 100 Minus
3R 32079331 3R 22522034..22522150 679..563 585 100 Minus
3R 32079331 3R 22529461..22529552 1359..1268 205 81.5 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:24:11
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 22261866..22262623 1435..678 3790 100 Minus
3R 31820162 3R 22260915..22261219 1923..1619 1465 98.6 Minus
3R 31820162 3R 22267618..22267914 564..268 1455 99.3 Minus
3R 31820162 3R 22269227..22269492 267..1 1295 99.6 Minus
3R 31820162 3R 22261335..22261520 1620..1435 930 100 Minus
3R 31820162 3R 22262865..22262981 679..563 585 100 Minus
3R 31820162 3R 22270292..22270383 1359..1268 205 81.5 Minus
3R 31820162 3R 22270409..22270473 1092..1028 145 81.5 Minus
Blast to na_te.dros performed 2019-03-16 09:40:43
Subject Length Description Subject Range Query Range Score Percent Strand
aurora-element 4263 aurora-element DMAURA 4263bp Derived from AB022762 (d1268008) (Rel. 59, Last updated, Version 1). 3746..3875 1274..1152 120 61.7 Minus

FI07970.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 09:41:33 Download gff for FI07970.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 18345593..18345708 564..679 100 <- Minus
chr3R 18343646..18343945 1621..1920 100 <- Minus
chr3R 18344063..18344247 1436..1620 100 <- Minus
chr3R 18344594..18345349 680..1435 99 <- Minus
chr3R 18350341..18350636 268..563 99 <- Minus
chr3R 18351949..18352215 1..267 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:57:00 Download gff for FI07970.complete
Subject Subject Range Query Range Percent Splice Strand
CG5346-RA 1..1212 479..1690 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:08:38 Download gff for FI07970.complete
Subject Subject Range Query Range Percent Splice Strand
CG5346-RA 1..1212 479..1690 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 09:38:23 Download gff for FI07970.complete
Subject Subject Range Query Range Percent Splice Strand
CG5346-RA 1..1212 479..1690 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-09-08 12:18:56 Download gff for FI07970.complete
Subject Subject Range Query Range Percent Splice Strand
CG5346-RA 1..1212 479..1690 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 09:43:46 Download gff for FI07970.complete
Subject Subject Range Query Range Percent Splice Strand
CG5346-RA 1..1212 479..1690 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:34:48 Download gff for FI07970.complete
Subject Subject Range Query Range Percent Splice Strand
CG5346-RA 1..1919 1..1920 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:08:38 Download gff for FI07970.complete
Subject Subject Range Query Range Percent Splice Strand
CG5346-RA 1..1919 1..1920 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:38:23 Download gff for FI07970.complete
Subject Subject Range Query Range Percent Splice Strand
CG5346-RA 3..1921 1..1920 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-14 11:28:56 Download gff for FI07970.complete
Subject Subject Range Query Range Percent Splice Strand
CG5346-RA 1..1919 1..1920 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:43:46 Download gff for FI07970.complete
Subject Subject Range Query Range Percent Splice Strand
CG5346-RA 3..1921 1..1920 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:41:33 Download gff for FI07970.complete
Subject Subject Range Query Range Percent Splice Strand
3R 22520087..22520386 1621..1920 98 <- Minus
3R 22520504..22520688 1436..1620 100 <- Minus
3R 22521035..22521790 680..1435 100 <- Minus
3R 22522034..22522149 564..679 100 <- Minus
3R 22526788..22527083 268..563 99 <- Minus
3R 22528396..22528661 1..267 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:41:33 Download gff for FI07970.complete
Subject Subject Range Query Range Percent Splice Strand
3R 22520087..22520386 1621..1920 98 <- Minus
3R 22520504..22520688 1436..1620 100 <- Minus
3R 22521035..22521790 680..1435 100 <- Minus
3R 22522034..22522149 564..679 100 <- Minus
3R 22526788..22527083 268..563 99 <- Minus
3R 22528396..22528661 1..267 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:41:33 Download gff for FI07970.complete
Subject Subject Range Query Range Percent Splice Strand
3R 22520087..22520386 1621..1920 98 <- Minus
3R 22520504..22520688 1436..1620 100 <- Minus
3R 22521035..22521790 680..1435 100 <- Minus
3R 22522034..22522149 564..679 100 <- Minus
3R 22526788..22527083 268..563 99 <- Minus
3R 22528396..22528661 1..267 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:38:23 Download gff for FI07970.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 18345809..18346108 1621..1920 98 <- Minus
arm_3R 18346226..18346410 1436..1620 100 <- Minus
arm_3R 18346757..18347512 680..1435 100 <- Minus
arm_3R 18347756..18347871 564..679 100 <- Minus
arm_3R 18352510..18352805 268..563 99 <- Minus
arm_3R 18354118..18354383 1..267 99   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:38:13 Download gff for FI07970.complete
Subject Subject Range Query Range Percent Splice Strand
3R 22260918..22261217 1621..1920 98 <- Minus
3R 22261335..22261519 1436..1620 100 <- Minus
3R 22261866..22262621 680..1435 100 <- Minus
3R 22262865..22262980 564..679 100 <- Minus
3R 22267619..22267914 268..563 99 <- Minus
3R 22269227..22269492 1..267 99   Minus

FI07970.pep Sequence

Translation from 478 to 1689

> FI07970.pep
MIKTKSSDDKLDTLLSRSVVPIIDLAHCGIEEVPVKSVVNRVGHQLKKAL
SEKGMALLVNHGISDEKLKTAWDHLDDFVNLPPDIRQHYIRADGDKHGYV
SRGQQQRFDGKSPELRHAFNISTLNAQNLPEEPLPGFADHISTLATDFKA
LASFILQALAVSLDIPHTFFLEKHSHMLSGDHDNMSSLRMLYYPPIVDDE
PGQNDVIKGRCQYSYQRCLSNQPDFRPEHNPRDEDDLNEVDGPNGQLFEH
KLGNGAVIQCPPHVDYGTFTLLSQDSEGGLEVRLPGSEKWNRVGHLPGSI
LVNCGEILNIWTQGRYPALQHRVIIPEQETIRARGRHSIAFFCHPDNITT
ISPTDLPNPDAVQDKACLKQRKKSFKAAKERVYNAYQLIQKKFRDTYSSN
NHS*

FI07970.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 01:49:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF16151-PA 404 GF16151-PA 1..404 1..403 2029 92.3 Plus
Dana\GF16150-PA 330 GF16150-PA 1..327 1..398 1080 53.5 Plus
Dana\GF16149-PA 319 GF16149-PA 1..317 11..400 631 37.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 01:50:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG12509-PA 403 GG12509-PA 1..403 1..403 2127 97.8 Plus
Dere\GG12508-PA 331 GG12508-PA 1..326 1..397 1042 51.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 01:50:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH17399-PA 408 GH17399-PA 1..405 1..401 1808 82.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:58:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG5346-PA 403 CG5346-PA 1..403 1..403 2152 100 Plus
CG33099-PA 331 CG33099-PA 1..330 1..401 1027 51.1 Plus
CG33093-PA 322 CG33093-PA 6..290 12..356 795 48.3 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 01:50:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI22727-PA 405 GI22727-PA 1..405 1..403 1779 81.8 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 01:50:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL13685-PA 403 GL13685-PA 1..403 1..403 1960 89.4 Plus
Dper\GL13684-PA 342 GL13684-PA 1..332 1..397 1014 52.8 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 01:50:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA18819-PA 403 GA18819-PA 1..403 1..403 1960 89.4 Plus
Dpse\GA26989-PA 344 GA26989-PA 1..334 1..397 1014 52.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 01:50:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM23643-PA 403 GM23643-PA 1..403 1..403 2163 99.5 Plus
Dsec\GM23640-PA 322 GM23640-PA 2..290 8..356 806 47.2 Plus
Dsec\GM23642-PA 180 GM23642-PA 1..176 159..398 575 48.8 Plus
Dsec\GM23641-PA 118 GM23641-PA 1..112 1..119 338 55.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 01:50:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD18452-PA 403 GD18452-PA 1..403 1..403 2163 99.5 Plus
Dsim\GD18451-PA 331 GD18451-PA 1..331 1..402 1051 51.2 Plus
Dsim\GD18450-PA 284 GD18450-PA 2..273 8..356 693 43.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 01:50:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ24665-PA 408 GJ24665-PA 1..407 1..403 1867 85.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 01:50:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK14437-PA 404 GK14437-PA 1..403 1..403 1888 85.1 Plus
Dwil\GK14436-PA 332 GK14436-PA 1..329 1..397 1004 50.6 Plus
Dwil\GK14435-PA 315 GK14435-PA 3..305 12..366 831 48 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 01:50:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE24031-PA 403 GE24031-PA 1..403 1..403 2153 99 Plus
Dyak\GE24030-PA 331 GE24030-PA 1..331 1..402 1048 51.2 Plus
Dyak\GE24029-PA 321 GE24029-PA 2..289 8..356 813 46.6 Plus

FI07970.hyp Sequence

Translation from 478 to 1689

> FI07970.hyp
MIKTKSSDDKLDTLLSRSVVPIIDLAHCGIEEVPVKSVVNRVGHQLKKAL
SEKGMALLVNHGISDEKLKTAWDHLDDFVNLPPDIRQHYIRADGDKHGYV
SRGQQQRFDGKSPELRHAFNISTLNAQNLPEEPLPGFADHISTLATDFKA
LASFILQALAVSLDIPHTFFLEKHSHMLSGDHDNMSSLRMLYYPPIVDDE
PGQNDVIKGRCQYSYQRCLSNQPDFRPEHNPRDEDDLNEVDGPNGQLFEH
KLGNGAVIQCPPHVDYGTFTLLSQDSEGGLEVRLPGSEKWNRVGHLPGSI
LVNCGEILNIWTQGRYPALQHRVIIPEQETIRARGRHSIAFFCHPDNITT
ISPTDLPNPDAVQDKACLKQRKKSFKAAKERVYNAYQLIQKKFRDTYSSN
NHS*

FI07970.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:37:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG5346-PA 403 CG5346-PA 1..403 1..403 2152 100 Plus
CG33099-PA 331 CG33099-PA 1..330 1..401 1027 51.1 Plus
CG33093-PA 322 CG33093-PA 6..290 12..356 795 48.3 Plus