Clone FI08001 Report

Search the DGRC for FI08001

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:80
Well:1
Vector:pOTB7
Associated Gene/TranscriptCG13870-RA
Protein status:FI08001.pep: gold
Sequenced Size:1829

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG13870 2008-08-15 Release 5.9 accounting
CG13870 2008-12-18 5.12 accounting

Clone Sequence Records

FI08001.complete Sequence

1829 bp assembled on 2008-08-14

GenBank Submission: BT044358.1

> FI08001.complete
CTGTAGTAACACAAAACTCGGTAAAGTTAATGTATATATTTAAGAAATAA
AGTAGTACAGCAAACATGGAGAAGAGCACACTGAAGATCAATAATGAGGA
CCGGCAGAATTTTGTGGCCACGCGGATGAGTCTGCCGCTCTTTATGGTGT
CCCGCAATCGTATTAGAAAGGAAAATTTACCGCGAGTGGAGAAGCAATTT
AAGTTGGCCGGTCAGCATTACAATGAGTTCTGCCAGAAGGAAAACAGACG
AGAGGCCTTCAGCAAAGCCACCTTTGATCACTACCGCCACATTACGGGTT
TCGACAAGACGCCAAAGAATCCGTATCCGGAACGTCGAAGGCTACACATC
GATCGGAGTATGACCAAATGGAGGGGCTGGCAACTGCCCCCAAATCATTA
CGGAGTGCCCCCGGAACCGTATCTCCGACTGAAGGGCACCAAGGGCTCCG
TATTCGCCAAGCCGCACACGAATCATAGTCGCGTCTCCATTAAACCACCG
CCATATCATTTTTACGAACTTCCGGCGGAAATCGAGAGGCTCTTCAAGCG
CCCGAACTTGCAAAAGGGTATCTTCCTTTCAAATGCCCGCGATCGTCGAC
CGACCACACACGCTATGATTTCCAATCTGTCTGGCTGCTGGCGTAATCCC
AAGGATGCCGGTCCCTGCGACACCCATACAAACATCTTTGAGTTGGCCGC
AAATGCTGTACCCGTCACAAAGGCGCCACGCCCTAATCCGCACCTGTTTC
TGCGCCACTCCTGTGTGCCCACCAAGCCCAATCGACTGATCCGACGCCAT
ATCAGCATGGAACCGGCTCCAGGTCGCTACTGCACCAGTTATCCGAACGT
GTGTCCCTGTCCGTCTGGTAAGACCAGTGTGCCGGGACTACAGCTGATGA
TTGATGACCAGAAGCGCCTGAAGTTTCGCCGCCTGCCATTTGAAAGGATC
AGTCGAAAGCGACTCTGTGAGCCGGATTGGCGCCATGTCGAGGGCCAAGG
CCATCGTCATGTCTTCCTAATGGGACGCAAAGATAGACCCAAGCCCACCA
AGAAACCCACTTCTTCCAAAAAGCAGGGCAAGCCGATAAGCATGTATGCC
GATTCCAAGTACATTAACATGCTGAGCCAGCCGCAGCGACATCCCATTTC
CATTCGGGCGTATCCGGTTCCTCCGTACGTGCCCAAGATCACCTACAACT
GTGCAGCCAAGCGGGTGATCCGCAAGCAATTGAAGAACAACAAGAAGATC
GCCTTCAATAGTGGCCAGGAGCGATGGAAGGATGGCGAACGACCAATGCA
GCTGACCGCCCGCCAACTGGAGGCCATCAAGCAGAAGCTACCGCCGGAGA
GGCGACTGATGGACTATCCCATTGAGCTGCCGGAGGTGATTCCCAGTCGA
CTGACCCAGGTGCCCGATCACCAGAGGGTCACCTACATGCCCAAGTTGCG
CAAGCGTCTGTTCAAGTTCCTGCCGATTCCCGGTGCTCGGGTCCTGGTCA
CCGACAGCGATATACGTCCGGACATTGTTTTCGATCCGGAGCACCCGACC
GGACTGTACCGGCGCAAGATCGATGAGACCGCGTTCTACAAGGACTCCGT
GTTGCGGGCGATGGAGAATAAGGAGGGTTCAGATGCTACCGGTTTGAACG
AATCACAGTCGCAATCGCAGTCCCAATTGGATTCGCCCCATCAGTCCATG
ATCCGAAACAATGGTAGCGCTGCGGATCCGTTGGAACCCAAGAGCGCTTC
CCAGATATCATTCCATGAATAAAATGGCCAGCGGCTCTGCTCCACGTTCG
TTCCCGTTTCGAAAAAAAAAAAAAAAAAA

FI08001.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:04:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG13870-RA 2125 CG13870-RA 60..1872 1..1813 8990 99.7 Plus
CG13870-RB 1921 CG13870-RB 210..1783 240..1813 7810 99.7 Plus
CG13870-RB 1921 CG13870-RB 1..210 1..210 1035 99.5 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 21:18:52
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 16231652..16232880 583..1811 6130 99.9 Plus
chr2R 21145070 chr2R 16231197..16231539 240..582 1700 99.7 Plus
chr2R 21145070 chr2R 16230847..16231000 1..154 770 100 Plus
chr2R 21145070 chr2R 16231058..16231144 154..240 435 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:19:46 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 21:18:50
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 20344650..20345880 583..1813 6095 99.7 Plus
2R 25286936 2R 20344195..20344537 240..582 1715 100 Plus
2R 25286936 2R 20343845..20343998 1..154 755 99.4 Plus
2R 25286936 2R 20344056..20344142 154..240 435 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:23:13
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 20345849..20347079 583..1813 6095 99.6 Plus
2R 25260384 2R 20345394..20345736 240..582 1715 100 Plus
2R 25260384 2R 20345044..20345197 1..154 755 99.3 Plus
2R 25260384 2R 20345255..20345341 154..240 435 100 Plus
Blast to na_te.dros performed on 2019-03-15 21:18:51 has no hits.

FI08001.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 21:19:44 Download gff for FI08001.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 16230847..16230999 1..153 100 -> Plus
chr2R 16231058..16231144 154..240 100 -> Plus
chr2R 16231198..16231539 241..582 99 -> Plus
chr2R 16231652..16232880 583..1811 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:57:01 Download gff for FI08001.complete
Subject Subject Range Query Range Percent Splice Strand
CG13870-RA 1..1707 66..1772 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:06:58 Download gff for FI08001.complete
Subject Subject Range Query Range Percent Splice Strand
CG13870-RA 1..1707 66..1772 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 05:44:19 Download gff for FI08001.complete
Subject Subject Range Query Range Percent Splice Strand
CG13870-RA 1..1707 66..1772 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-09-08 12:18:22 Download gff for FI08001.complete
Subject Subject Range Query Range Percent Splice Strand
CG13870-RA 1..1707 66..1772 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 00:49:53 Download gff for FI08001.complete
Subject Subject Range Query Range Percent Splice Strand
CG13870-RA 1..1707 66..1772 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:31:58 Download gff for FI08001.complete
Subject Subject Range Query Range Percent Splice Strand
CG13870-RA 1..1811 1..1811 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:06:58 Download gff for FI08001.complete
Subject Subject Range Query Range Percent Splice Strand
CG13870-RA 1..1811 1..1811 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:44:19 Download gff for FI08001.complete
Subject Subject Range Query Range Percent Splice Strand
CG13870-RA 1..1811 1..1811 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-14 11:29:04 Download gff for FI08001.complete
Subject Subject Range Query Range Percent Splice Strand
CG13870-RA 1..1811 1..1811 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:49:53 Download gff for FI08001.complete
Subject Subject Range Query Range Percent Splice Strand
CG13870-RA 1..1811 1..1811 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 21:19:44 Download gff for FI08001.complete
Subject Subject Range Query Range Percent Splice Strand
2R 20343845..20343997 1..153 99 -> Plus
2R 20344056..20344142 154..240 100 -> Plus
2R 20344196..20344537 241..582 100 -> Plus
2R 20344650..20345878 583..1811 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 21:19:44 Download gff for FI08001.complete
Subject Subject Range Query Range Percent Splice Strand
2R 20343845..20343997 1..153 99 -> Plus
2R 20344056..20344142 154..240 100 -> Plus
2R 20344196..20344537 241..582 100 -> Plus
2R 20344650..20345878 583..1811 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 21:19:44 Download gff for FI08001.complete
Subject Subject Range Query Range Percent Splice Strand
2R 20343845..20343997 1..153 99 -> Plus
2R 20344056..20344142 154..240 100 -> Plus
2R 20344196..20344537 241..582 100 -> Plus
2R 20344650..20345878 583..1811 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:44:19 Download gff for FI08001.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 16231350..16231502 1..153 99 -> Plus
arm_2R 16231561..16231647 154..240 100 -> Plus
arm_2R 16231701..16232042 241..582 100 -> Plus
arm_2R 16232155..16233383 583..1811 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:36:07 Download gff for FI08001.complete
Subject Subject Range Query Range Percent Splice Strand
2R 20345395..20345736 241..582 100 -> Plus
2R 20345849..20347077 583..1811 99   Plus
2R 20345044..20345196 1..153 99 -> Plus
2R 20345255..20345341 154..240 100 -> Plus

FI08001.pep Sequence

Translation from 65 to 1771

> FI08001.pep
MEKSTLKINNEDRQNFVATRMSLPLFMVSRNRIRKENLPRVEKQFKLAGQ
HYNEFCQKENRREAFSKATFDHYRHITGFDKTPKNPYPERRRLHIDRSMT
KWRGWQLPPNHYGVPPEPYLRLKGTKGSVFAKPHTNHSRVSIKPPPYHFY
ELPAEIERLFKRPNLQKGIFLSNARDRRPTTHAMISNLSGCWRNPKDAGP
CDTHTNIFELAANAVPVTKAPRPNPHLFLRHSCVPTKPNRLIRRHISMEP
APGRYCTSYPNVCPCPSGKTSVPGLQLMIDDQKRLKFRRLPFERISRKRL
CEPDWRHVEGQGHRHVFLMGRKDRPKPTKKPTSSKKQGKPISMYADSKYI
NMLSQPQRHPISIRAYPVPPYVPKITYNCAAKRVIRKQLKNNKKIAFNSG
QERWKDGERPMQLTARQLEAIKQKLPPERRLMDYPIELPEVIPSRLTQVP
DHQRVTYMPKLRKRLFKFLPIPGARVLVTDSDIRPDIVFDPEHPTGLYRR
KIDETAFYKDSVLRAMENKEGSDATGLNESQSQSQSQLDSPHQSMIRNNG
SAADPLEPKSASQISFHE*

FI08001.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 01:45:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF12264-PA 569 GF12264-PA 1..568 1..567 2264 76.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 01:45:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG22031-PA 566 GG22031-PA 1..566 1..568 2820 93 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 01:45:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH20834-PA 571 GH20834-PA 1..521 1..519 1763 63.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:25:45
Subject Length Description Subject Range Query Range Score Percent Strand
CG13870-PA 568 CG13870-PA 1..568 1..568 3061 100 Plus
CG13870-PB 558 CG13870-PB 1..558 1..568 2978 98.2 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 01:45:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI20936-PA 574 GI20936-PA 8..543 6..536 1686 60.8 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 01:45:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL17661-PA 632 GL17661-PA 1..570 1..565 1981 64.4 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 01:45:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA12586-PA 635 GA12586-PA 1..527 1..522 1988 68.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 01:45:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM22013-PA 566 GM22013-PA 1..566 1..568 2937 96.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 01:45:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD11512-PA 558 GD11512-PA 1..558 1..568 2846 94.4 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 01:45:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ20661-PA 581 GJ20661-PA 1..565 1..566 1805 61.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 01:45:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK15978-PA 621 GK15978-PA 3..513 2..520 1719 62.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 01:45:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE12109-PA 564 GE12109-PA 1..564 1..568 2819 93 Plus

FI08001.hyp Sequence

Translation from 65 to 1771

> FI08001.hyp
MEKSTLKINNEDRQNFVATRMSLPLFMVSRNRIRKENLPRVEKQFKLAGQ
HYNEFCQKENRREAFSKATFDHYRHITGFDKTPKNPYPERRRLHIDRSMT
KWRGWQLPPNHYGVPPEPYLRLKGTKGSVFAKPHTNHSRVSIKPPPYHFY
ELPAEIERLFKRPNLQKGIFLSNARDRRPTTHAMISNLSGCWRNPKDAGP
CDTHTNIFELAANAVPVTKAPRPNPHLFLRHSCVPTKPNRLIRRHISMEP
APGRYCTSYPNVCPCPSGKTSVPGLQLMIDDQKRLKFRRLPFERISRKRL
CEPDWRHVEGQGHRHVFLMGRKDRPKPTKKPTSSKKQGKPISMYADSKYI
NMLSQPQRHPISIRAYPVPPYVPKITYNCAAKRVIRKQLKNNKKIAFNSG
QERWKDGERPMQLTARQLEAIKQKLPPERRLMDYPIELPEVIPSRLTQVP
DHQRVTYMPKLRKRLFKFLPIPGARVLVTDSDIRPDIVFDPEHPTGLYRR
KIDETAFYKDSVLRAMENKEGSDATGLNESQSQSQSQLDSPHQSMIRNNG
SAADPLEPKSASQISFHE*

FI08001.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:37:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG13870-PA 568 CG13870-PA 1..568 1..568 3061 100 Plus
CG13870-PB 558 CG13870-PB 1..558 1..568 2978 98.2 Plus