Clone FI08003 Report

Search the DGRC for FI08003

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:80
Well:3
Vector:pOTB7
Associated Gene/TranscriptCG42733-RB
Protein status:FI08003.pep: gold
Sequenced Size:659

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG12901 2008-12-18 5.12 accounting

Clone Sequence Records

FI08003.complete Sequence

659 bp assembled on 2008-08-25

GenBank Submission: BT044359.1

> FI08003.complete
CCATTCTATTTCAGCCTTATCACATATCAAAATTTTAAAAATTTTAGGTT
TCCAAAATTTGTAAATTTTATACCCCGATTAGCTAGATTTTTATTCCCTA
AGATGCGGATGCTTTGCGACAGACTCTCCGCCCTGACGGCTGGTGCCATG
GTCGGCGTTTGGTACGCCCAAAACTTCCCCTGCGAAAATCCTACGGATGG
AGGCGACAAAGATAAGGCCAAGGACAAGGCCAAAAGCACGGATAAGGGAA
AAGAGAAGGAGAAGGATAAGGGGAAGGGGAAGGATGGTGGCCAGGACAAG
GGCAAGGAGAAAGGCAAGGAATAGGGATAAGAAAATAGCTAAAAAGGGGT
GGAAAAATCACACCATTTAGACGATACAATACGATACGTATGTGCAAGTC
CTCTTAAACGAATTTCTCCTCTAGTTAGTCCAAAACGTACTAGTAGACAT
GAGCAAAACTCCAACGTCGACGATGCAATTGGCTTGAAAAGGAAAAGTTT
GAAGTAAATGGCCGCTGATAACGCTTCCGAAAGAGCTATGTTTATATGGT
TTTATTATCACATGCTCTGAAGCAGATGTTAACGATTTTGCATTTAAATA
ATTATACGAGAATGCGTATTGTATCATCTTAAAAAAAAAAAAAAAAAAAA
AAAAAAAAA

FI08003.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:07:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG12901-RC 632 CG12901-RC 1..632 1..632 3145 99.8 Plus
CG12901-RA 734 CG12901-RA 222..734 120..632 2550 99.8 Plus
CG12901-RB 568 CG12901-RB 1..397 1..397 1925 98.9 Plus
CG12901-RB 568 CG12901-RB 388..568 447..627 905 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 00:50:53
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 6243593..6244222 630..1 3150 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:19:49 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 00:50:51
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 10356168..10356800 633..1 3150 99.8 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:25:53
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 10357367..10357999 633..1 3150 99.8 Minus
Blast to na_te.dros performed 2019-03-16 00:50:51
Subject Length Description Subject Range Query Range Score Percent Strand
1360 3409 1360 1360 3409bp 3016..3057 67..26 111 73.8 Minus

FI08003.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 00:51:34 Download gff for FI08003.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 6243593..6244222 1..630 92   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:57:04 Download gff for FI08003.complete
Subject Subject Range Query Range Percent Splice Strand
CG12901-RB 1..222 103..324 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:11:14 Download gff for FI08003.complete
Subject Subject Range Query Range Percent Splice Strand
CG42733-RB 1..222 103..324 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:52:41 Download gff for FI08003.complete
Subject Subject Range Query Range Percent Splice Strand
CG42733-RC 1..222 103..324 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-09-08 12:19:45 Download gff for FI08003.complete
Subject Subject Range Query Range Percent Splice Strand
CG12901-RB 1..222 103..324 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 04:15:32 Download gff for FI08003.complete
Subject Subject Range Query Range Percent Splice Strand
CG42733-RC 1..222 103..324 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:08:13 Download gff for FI08003.complete
Subject Subject Range Query Range Percent Splice Strand
CG12901-RC 1..630 1..630 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:11:13 Download gff for FI08003.complete
Subject Subject Range Query Range Percent Splice Strand
CG42733-RC 1..630 1..630 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:52:41 Download gff for FI08003.complete
Subject Subject Range Query Range Percent Splice Strand
CG42733-RC 1..630 1..630 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-25 10:59:12 Download gff for FI08003.complete
Subject Subject Range Query Range Percent Splice Strand
CG12901-RC 1..630 1..630 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 04:15:32 Download gff for FI08003.complete
Subject Subject Range Query Range Percent Splice Strand
CG42733-RC 1..630 1..630 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 00:51:34 Download gff for FI08003.complete
Subject Subject Range Query Range Percent Splice Strand
2R 10356171..10356800 1..630 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 00:51:34 Download gff for FI08003.complete
Subject Subject Range Query Range Percent Splice Strand
2R 10356171..10356800 1..630 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 00:51:34 Download gff for FI08003.complete
Subject Subject Range Query Range Percent Splice Strand
2R 10356171..10356800 1..630 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:52:41 Download gff for FI08003.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 6243676..6244305 1..630 99   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:41:27 Download gff for FI08003.complete
Subject Subject Range Query Range Percent Splice Strand
2R 10357370..10357999 1..630 99   Minus

FI08003.pep Sequence

Translation from 0 to 323

> FI08003.pep
PFYFSLITYQNFKNFRFPKFVNFIPRLARFLFPKMRMLCDRLSALTAGAM
VGVWYAQNFPCENPTDGGDKDKAKDKAKSTDKGKEKEKDKGKGKDGGQDK
GKEKGKE*

FI08003.pep Blast Records

Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 12:25:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG25216-PA 141 GG25216-PA 77..113 41..79 157 82.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:27:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG42733-PB 73 CG12901-PB 1..73 35..107 395 100 Plus
CG42733-PC 73 CG12901-PC 1..73 35..107 395 100 Plus
CG42733-PD 97 CG42733-PD 1..70 35..104 379 100 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 12:25:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM20535-PA 139 GM20535-PA 77..139 41..107 158 83.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 12:25:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD25992-PA 139 GD25992-PA 77..139 41..107 165 83.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 12:25:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE21622-PA 73 GE21622-PA 1..36 35..70 192 94.4 Plus

FI08003.hyp Sequence

Translation from 0 to 323

> FI08003.hyp
PFYFSLITYQNFKNFRFPKFVNFIPRLARFLFPKMRMLCDRLSALTAGAM
VGVWYAQNFPCENPTDGGDKDKAKDKAKSTDKGKEKEKDKGKGKDGGQDK
GKEKGKE*

FI08003.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:37:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG42733-PB 73 CG12901-PB 1..73 35..107 395 100 Plus
CG42733-PC 73 CG12901-PC 1..73 35..107 395 100 Plus
CG42733-PD 97 CG42733-PD 1..70 35..104 379 100 Plus