Clone FI08006 Report

Search the DGRC for FI08006

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:80
Well:6
Vector:pOTB7
Associated Gene/TranscriptCG17375-RC
Protein status:FI08006.pep: gold
Sequenced Size:1001

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG17375 2008-08-15 Release 5.9 accounting
CG17375 2008-12-18 5.12 accounting

Clone Sequence Records

FI08006.complete Sequence

1001 bp assembled on 2008-07-29

GenBank Submission: BT044360.1

> FI08006.complete
AAAGTATCTTGCAGTTTTAGCTTAAGTTTCCAGACTTTTAACTTCTACCT
TTTGAGCTCGTATATATAATTCAAAAATCTTCGGTGGTTTTAAAATTCTT
AGTGACTTAAATGCGATGGAAGATGTCCGCACTCTGCGGTATGATATCCA
ATGGGATGTTTTCGAGGGCATGCAAATAGTTGACATCAATTCAAATGTAC
TATGACATGGTGATCGAGTTCATGTGGTCCAATTCGTTTCTGAAAAGTCT
TGTCTATGAGAGTCTGGGACTATTCGATTTGCCGGACATGAAACAGACTT
ATTCTTGGTATGTGCGACACATCCTGCGAAACGAGTGCTCCGTGATGATG
ATTAGCGAAGATGAAACGCAAATAAGGGCAGTGGGATTGCTGGAATGGAT
GACCGAGGAATGGCACTCCTGGGTCTTCTTTCCCTCTTCGTTGCCCAGGA
ATCTGTTCCAGCAGATCATAATGATGAAGAAGGAGCTCATCGATGCGACC
AAAGCGAACATGGGCATCTCCACCTACGATGCACTGTTCGTCCACGAGAT
CGCCTTTCCGGATGAGCTCTACTTTAACCGGGATTTCCTGTCGACCATCT
TCGATGTCTTTGGCTTTGTGGCCCAGCACATGCACATGCCGCGGGTCAGC
TTCATCGCCCTCAGCTCCGTGGACCAGGAGGCCGCCAGTCTGATCGATTA
CGAAGAGATCGGGCGGACTATCTACTCGATCTACAAGGTTGGCAACACCC
GGCCCTTTGACATCCTTCGCGAGCTAGACGAGATGTACGCACTGCTGTTT
GAACTGGCCGTCTCGCCGGTACTGAAGTACATTGAAATGCCCGGTTTCGA
GGAGTTCCACGAGGCCCTGGATGCCAGGTTGGCCAAGGAGGCAGCCGAAA
AGCGCCACGACGACGATATATGATATGTTTCCTGCTGTCTTCTTCACATA
AATGTCTGCCTACTCTTGGGCTACCCCATCGTAAAAAAAAAAAAAAAAAA
A

FI08006.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:05:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG17375-RB 1340 CG17375-RB 119..1101 1..984 4865 99.7 Plus
CG17375.a 1064 CG17375.a 1..987 1..984 4850 99.5 Plus
CG17375.b 1058 CG17375.b 71..858 197..984 3925 99.8 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 03:58:22
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 6803667..6804228 982..421 2795 99.8 Minus
chr2L 23010047 chr2L 6804646..6804840 195..1 975 100 Minus
chr2L 23010047 chr2L 6804293..6804408 422..307 580 100 Minus
chr2L 23010047 chr2L 6804477..6804590 310..197 570 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:19:52 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 03:58:20
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 6804617..6805180 984..421 2805 99.8 Minus
2L 23513712 2L 6805598..6805792 195..1 975 100 Minus
2L 23513712 2L 6805245..6805360 422..307 580 100 Minus
2L 23513712 2L 6805429..6805542 310..197 570 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:24:05
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 6804617..6805180 984..421 2805 99.8 Minus
2L 23513712 2L 6805598..6805792 195..1 975 100 Minus
2L 23513712 2L 6805245..6805360 422..307 580 100 Minus
2L 23513712 2L 6805429..6805542 310..197 570 100 Minus
Blast to na_te.dros performed on 2019-03-16 03:58:21 has no hits.

FI08006.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 03:59:24 Download gff for FI08006.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 6803667..6804227 422..982 99 <- Minus
chr2L 6804294..6804407 308..421 100 <- Minus
chr2L 6804480..6804590 197..307 100 <- Minus
chr2L 6804642..6804840 1..196 98   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:57:08 Download gff for FI08006.complete
Subject Subject Range Query Range Percent Splice Strand
CG17375-RA 1..729 195..923 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:08:28 Download gff for FI08006.complete
Subject Subject Range Query Range Percent Splice Strand
CG17375-RB 1..807 116..923 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:10:11 Download gff for FI08006.complete
Subject Subject Range Query Range Percent Splice Strand
CG17375-RB 1..807 116..923 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-09-08 12:18:53 Download gff for FI08006.complete
Subject Subject Range Query Range Percent Splice Strand
CG17375-RA 1..729 195..923 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 05:20:58 Download gff for FI08006.complete
Subject Subject Range Query Range Percent Splice Strand
CG17375-RB 1..807 116..923 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:34:28 Download gff for FI08006.complete
Subject Subject Range Query Range Percent Splice Strand
CG17375-RA 1..985 1..982 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:08:28 Download gff for FI08006.complete
Subject Subject Range Query Range Percent Splice Strand
CG17375-RB 1..981 1..982 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:10:11 Download gff for FI08006.complete
Subject Subject Range Query Range Percent Splice Strand
CG17375-RB 1..981 1..982 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-29 13:44:46 Download gff for FI08006.complete
Subject Subject Range Query Range Percent Splice Strand
CG17375-RA 1..985 1..982 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 05:20:58 Download gff for FI08006.complete
Subject Subject Range Query Range Percent Splice Strand
CG17375-RB 1..981 1..982 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 03:59:24 Download gff for FI08006.complete
Subject Subject Range Query Range Percent Splice Strand
2L 6805432..6805542 197..307 100 <- Minus
2L 6805246..6805359 308..421 100 <- Minus
2L 6804619..6805179 422..982 99 <- Minus
2L 6805594..6805792 1..196 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 03:59:24 Download gff for FI08006.complete
Subject Subject Range Query Range Percent Splice Strand
2L 6805432..6805542 197..307 100 <- Minus
2L 6805246..6805359 308..421 100 <- Minus
2L 6804619..6805179 422..982 99 <- Minus
2L 6805594..6805792 1..196 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 03:59:24 Download gff for FI08006.complete
Subject Subject Range Query Range Percent Splice Strand
2L 6805432..6805542 197..307 100 <- Minus
2L 6805246..6805359 308..421 100 <- Minus
2L 6804619..6805179 422..982 99 <- Minus
2L 6805594..6805792 1..196 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:10:11 Download gff for FI08006.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 6804619..6805179 422..982 99 <- Minus
arm_2L 6805246..6805359 308..421 100 <- Minus
arm_2L 6805432..6805542 197..307 100 <- Minus
arm_2L 6805594..6805792 1..196 98   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:38:00 Download gff for FI08006.complete
Subject Subject Range Query Range Percent Splice Strand
2L 6805246..6805359 308..421 100 <- Minus
2L 6805432..6805542 197..307 100 <- Minus
2L 6805594..6805792 1..196 98   Minus
2L 6804619..6805179 422..982 99 <- Minus

FI08006.pep Sequence

Translation from 194 to 922

> FI08006.pep
MYYDMVIEFMWSNSFLKSLVYESLGLFDLPDMKQTYSWYVRHILRNECSV
MMISEDETQIRAVGLLEWMTEEWHSWVFFPSSLPRNLFQQIIMMKKELID
ATKANMGISTYDALFVHEIAFPDELYFNRDFLSTIFDVFGFVAQHMHMPR
VSFIALSSVDQEAASLIDYEEIGRTIYSIYKVGNTRPFDILRELDEMYAL
LFELAVSPVLKYIEMPGFEEFHEALDARLAKEAAEKRHDDDI*

FI08006.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 19:33:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF14476-PA 238 GF14476-PA 1..237 5..241 1093 85.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 19:33:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG23577-PA 383 GG23577-PA 143..383 2..242 1236 94.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 19:33:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH13170-PA 235 GH13170-PA 1..228 10..240 698 56 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:33:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG17375-PD 242 CG17375-PD 1..242 1..242 1263 100 Plus
CG17375-PC 242 CG17375-PC 1..242 1..242 1263 100 Plus
CG17375-PB 268 CG17375-PB 28..268 2..242 1258 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 19:33:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI17749-PA 269 GI17749-PA 29..254 3..228 745 61.5 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 19:33:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL25609-PA 268 GL25609-PA 28..248 2..222 910 72.4 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 19:33:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA14487-PA 256 GA14487-PA 16..236 2..222 910 72.4 Plus
Dpse\GA28047-PA 261 GA28047-PA 16..241 2..222 885 70.4 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 19:33:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM13793-PA 238 GM13793-PA 1..238 5..242 1247 98.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 19:33:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ17575-PA 270 GJ17575-PA 28..254 2..227 757 62.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 19:33:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK24787-PA 270 GK24787-PA 28..262 3..239 923 73 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 19:33:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE18399-PA 268 GE18399-PA 28..268 2..242 1234 95 Plus

FI08006.hyp Sequence

Translation from 195 to 922

> FI08006.hyp
MYYDMVIEFMWSNSFLKSLVYESLGLFDLPDMKQTYSWYVRHILRNECSV
MMISEDETQIRAVGLLEWMTEEWHSWVFFPSSLPRNLFQQIIMMKKELID
ATKANMGISTYDALFVHEIAFPDELYFNRDFLSTIFDVFGFVAQHMHMPR
VSFIALSSVDQEAASLIDYEEIGRTIYSIYKVGNTRPFDILRELDEMYAL
LFELAVSPVLKYIEMPGFEEFHEALDARLAKEAAEKRHDDDI*

FI08006.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:37:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG17375-PD 242 CG17375-PD 1..242 1..242 1263 100 Plus
CG17375-PC 242 CG17375-PC 1..242 1..242 1263 100 Plus
CG17375-PB 268 CG17375-PB 28..268 2..242 1258 100 Plus