Clone FI08018 Report

Search the DGRC for FI08018

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:80
Well:18
Vector:pOTB7
Associated Gene/TranscriptCG12782-RA
Protein status:FI08018.pep: gold
Sequenced Size:1228

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG12782 2008-08-15 Release 5.9 accounting
CG12782 2008-12-18 5.12 accounting

Clone Sequence Records

FI08018.complete Sequence

1228 bp assembled on 2008-08-14

GenBank Submission: BT044365.1

> FI08018.complete
CCGTTTTAAAAATCGAAAAATTCTTACGAAATCGAAAAGCGGAGCACCGA
TTCTGAGATTTACAAATATACTACATAGTAATGTTATCGAAACCAAGCTG
GTAATCGTGGACCGGAGTTGTACAACTACTCCTCCAGTCATGAATCAATT
CGGCCAGCCAAAGCAAACGCAGCAACAGGATTACGAACTACCCAATCCGC
CAAATGACACCATATCAGCGCTGGAGTTTTCACCGCGATCGAGTTCCTGG
AACGCAATCTGTGCCGGAAGTTGGGATAACACCGTGCGCATTTGGGAGGT
GCAAGCGGACAGGCTGGTGCCCAAGGTCATGAATTCGCTGGAGGGCACGC
CATTCGATGTCACTTGGAACGACTCAGGCAACAAGGTATACCTGAGCGAC
TCCAGCGGCCAGGTGACTGAGTGGGACTTAGAATCGAACCAGCTGAGAAA
GGTGGGACTTCACGCAAGAGCTGCACGCACCTGCCATTGGGTGGGCCCCT
ATTTGGCCACAACCTCATGGGACAAGTCCATTAGGTTCTGGGACCCGCGT
GCTGCCATAGAACTCACCAGGATGGAGCTACCGGATCGTAGCTATGCCGC
CGATGTGCTCAACGACGTGGCGGTGGTGGCCTGCGGCGATCGGTCCATCC
TGGCCTACACTCTGCGTGGCGGACCCGTGGAGCAGGGGCGCATGAAGAGT
CCGGGCGAGAGCAACACCCAAGTGCGATCGGTGGCGCTCCACCAGAATAG
AGATCTGACCAGCTGGCTTATTGCCAAGACGAATGGCATGGTGTTCGATC
AGAGCATGGCTCATCGTACGGTCAGTTTTCCAATCAGGTGCCATCGACGG
GAGAATTCCGGCATCCTAGACGTCTATGCGGTGAACGAAGTGAAGGTCAA
CATGGTGACGCAGCACATTGCCACGGTGGGATCGGATGGAGTGTTCTGCT
TCTGGGACAGCCAGATGCGTTCCAAGCTGCTGGAAAGCAAGGTTCATCCT
CAGCCGATCACTAAGTGCGCCATCAGTGGCGATGGCAAGCTCTTTGCGTA
TGCTCTGGGCTACGATTGGTCCAAGGGACACGAGTACTCGGATTCCAGCA
TAAAACCCCACATATTCCTGCGCCCGTTTGAAACGAATGTTGCTGCCTAA
ATGCCGACTATCAGTTGTTTTTTTTATATACAGATTAAAGTTTTACCATT
TTCTAATTGCAAAAAAAAAAAAAAAAAA

FI08018.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:04:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG12782-RA 1293 CG12782-RA 80..1291 1..1212 6060 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 15:13:04
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 19150642..19151317 1210..535 3380 100 Minus
chr2R 21145070 chr2R 19151373..19151907 535..1 2660 99.8 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:20:01 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 15:13:02
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 23264267..23264944 1212..535 3390 100 Minus
2R 25286936 2R 23265000..23265534 535..1 2675 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:23:08
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 23265466..23266143 1212..535 3390 100 Minus
2R 25260384 2R 23266199..23266733 535..1 2675 100 Minus
Blast to na_te.dros performed on 2019-03-15 15:13:03 has no hits.

FI08018.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 15:13:59 Download gff for FI08018.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 19150642..19151316 536..1210 100 <- Minus
chr2R 19151373..19151907 1..535 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:57:19 Download gff for FI08018.complete
Subject Subject Range Query Range Percent Splice Strand
CG12782-RA 1..1011 140..1150 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:06:49 Download gff for FI08018.complete
Subject Subject Range Query Range Percent Splice Strand
CG12782-RA 1..1011 140..1150 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 01:07:30 Download gff for FI08018.complete
Subject Subject Range Query Range Percent Splice Strand
CG12782-RA 1..1011 140..1150 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-09-08 12:18:19 Download gff for FI08018.complete
Subject Subject Range Query Range Percent Splice Strand
CG12782-RA 1..1011 140..1150 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:31:37 Download gff for FI08018.complete
Subject Subject Range Query Range Percent Splice Strand
CG12782-RA 1..1011 140..1150 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:31:44 Download gff for FI08018.complete
Subject Subject Range Query Range Percent Splice Strand
CG12782-RA 1..1210 1..1210 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:06:49 Download gff for FI08018.complete
Subject Subject Range Query Range Percent Splice Strand
CG12782-RA 1..1210 1..1210 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:07:30 Download gff for FI08018.complete
Subject Subject Range Query Range Percent Splice Strand
CG12782-RA 10..1219 1..1210 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-14 11:29:17 Download gff for FI08018.complete
Subject Subject Range Query Range Percent Splice Strand
CG12782-RA 1..1210 1..1210 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:31:37 Download gff for FI08018.complete
Subject Subject Range Query Range Percent Splice Strand
CG12782-RA 10..1219 1..1210 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:13:59 Download gff for FI08018.complete
Subject Subject Range Query Range Percent Splice Strand
2R 23264269..23264943 536..1210 100 <- Minus
2R 23265000..23265534 1..535 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:13:59 Download gff for FI08018.complete
Subject Subject Range Query Range Percent Splice Strand
2R 23264269..23264943 536..1210 100 <- Minus
2R 23265000..23265534 1..535 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:13:59 Download gff for FI08018.complete
Subject Subject Range Query Range Percent Splice Strand
2R 23264269..23264943 536..1210 100 <- Minus
2R 23265000..23265534 1..535 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:07:30 Download gff for FI08018.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 19151792..19152466 536..1210 100 <- Minus
arm_2R 19152523..19153057 1..535 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:35:55 Download gff for FI08018.complete
Subject Subject Range Query Range Percent Splice Strand
2R 23265486..23266160 536..1210 100 <- Minus
2R 23266217..23266751 1..535 100   Minus

FI08018.pep Sequence

Translation from 1 to 1149

> FI08018.pep
RFKNRKILTKSKSGAPILRFTNILHSNVIETKLVIVDRSCTTTPPVMNQF
GQPKQTQQQDYELPNPPNDTISALEFSPRSSSWNAICAGSWDNTVRIWEV
QADRLVPKVMNSLEGTPFDVTWNDSGNKVYLSDSSGQVTEWDLESNQLRK
VGLHARAARTCHWVGPYLATTSWDKSIRFWDPRAAIELTRMELPDRSYAA
DVLNDVAVVACGDRSILAYTLRGGPVEQGRMKSPGESNTQVRSVALHQNR
DLTSWLIAKTNGMVFDQSMAHRTVSFPIRCHRRENSGILDVYAVNEVKVN
MVTQHIATVGSDGVFCFWDSQMRSKLLESKVHPQPITKCAISGDGKLFAY
ALGYDWSKGHEYSDSSIKPHIFLRPFETNVAA*

FI08018.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 01:43:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF13306-PA 373 GF13306-PA 18..354 51..374 710 40.7 Plus
Dana\GF11632-PA 336 GF11632-PA 3..325 60..374 684 42.7 Plus
Dana\GF22876-PA 326 GF22876-PA 5..297 60..354 284 27.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 01:43:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG20054-PA 335 GG20054-PA 1..334 47..378 1430 78.1 Plus
Dere\GG20758-PA 346 GG20758-PA 2..335 50..374 684 41.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 01:43:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH23041-PA 347 GH23041-PA 2..336 50..374 677 41.7 Plus
Dgri\GH18686-PA 326 GH18686-PA 5..316 60..374 269 26.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:30:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG12782-PA 336 CG12782-PA 1..336 47..382 1798 100 Plus
Rae1-PA 346 CG9862-PA 2..335 50..374 675 41.6 Plus
Bub3-PB 326 CG7581-PB 5..297 60..354 286 27.8 Plus
Bub3-PA 326 CG7581-PA 5..297 60..354 286 27.8 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 01:43:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI21110-PA 349 GI21110-PA 2..338 50..374 663 41.2 Plus
Dmoj\GI24196-PA 326 GI24196-PA 5..316 60..374 272 26.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 01:43:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL11275-PA 347 GL11275-PA 2..336 50..374 666 41.8 Plus
Dper\GL26269-PA 255 GL26269-PA 16..190 61..225 364 40.3 Plus
Dper\GL13583-PA 326 GL13583-PA 5..297 60..354 291 27.8 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 01:43:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA22080-PA 347 GA22080-PA 2..336 50..374 666 41.8 Plus
Dpse\GA28102-PA 214 GA28102-PA 22..153 59..184 291 38.6 Plus
Dpse\GA20454-PA 326 GA20454-PA 5..297 60..354 291 27.8 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 01:43:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM15568-PA 336 GM15568-PA 1..336 47..382 1690 92 Plus
Dsec\GM15702-PA 346 GM15702-PA 2..335 50..374 681 41.9 Plus
Dsec\GM12232-PA 326 GM12232-PA 5..297 60..354 291 27.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 01:43:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD25070-PA 336 GD25070-PA 1..336 47..382 1676 91.4 Plus
Dsim\GD25180-PA 173 GD25180-PA 2..167 50..209 356 45.2 Plus
Dsim\GD17697-PA 326 GD17697-PA 5..297 60..354 291 27.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 01:43:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ20959-PA 349 GJ20959-PA 2..338 50..374 667 42 Plus
Dvir\GJ20971-PA 333 GJ20971-PA 7..325 60..375 660 41.6 Plus
Dvir\GJ10544-PA 326 GJ10544-PA 5..297 60..354 272 26.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 01:43:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK19577-PA 348 GK19577-PA 2..337 50..374 682 41.7 Plus
Dwil\GK11174-PA 326 GK11174-PA 5..297 60..354 274 26.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 01:43:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE11590-PA 337 GE11590-PA 1..337 47..376 1435 79.8 Plus
Dyak\GE13690-PA 346 GE13690-PA 2..335 50..374 684 41.9 Plus
Dyak\GE10441-PA 326 GE10441-PA 5..297 60..354 293 28.1 Plus

FI08018.hyp Sequence

Translation from 1 to 1149

> FI08018.hyp
RFKNRKILTKSKSGAPILRFTNILHSNVIETKLVIVDRSCTTTPPVMNQF
GQPKQTQQQDYELPNPPNDTISALEFSPRSSSWNAICAGSWDNTVRIWEV
QADRLVPKVMNSLEGTPFDVTWNDSGNKVYLSDSSGQVTEWDLESNQLRK
VGLHARAARTCHWVGPYLATTSWDKSIRFWDPRAAIELTRMELPDRSYAA
DVLNDVAVVACGDRSILAYTLRGGPVEQGRMKSPGESNTQVRSVALHQNR
DLTSWLIAKTNGMVFDQSMAHRTVSFPIRCHRRENSGILDVYAVNEVKVN
MVTQHIATVGSDGVFCFWDSQMRSKLLESKVHPQPITKCAISGDGKLFAY
ALGYDWSKGHEYSDSSIKPHIFLRPFETNVAA*

FI08018.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:38:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG12782-PA 336 CG12782-PA 1..336 47..382 1798 100 Plus
Rae1-PA 346 CG9862-PA 2..335 50..374 675 41.6 Plus
Bub3-PB 326 CG7581-PB 5..297 60..354 286 27.8 Plus
Bub3-PA 326 CG7581-PA 5..297 60..354 286 27.8 Plus