Associations are from manual ordering of a clone or by a periodic analysis.
Clone Sequence Records
FI08021.complete Sequence
1342 bp assembled on 2008-08-28
GenBank Submission: BT044368.1
> FI08021.complete
CTTTAATCAAATATTCGGCTATCGAATATTAGATTGTTAGAGCTACAGAA
ATTTGTCAAGTTGATTAGGATGGTGAGCATTGATCCTATAATATTCCAAG
TATACCACAAGCGTGTGGTAAAGATGCTGCTTTCAACTCTGGCCAGGATG
CTGATCGTGTCCAGCTTTCTGGCGGATGCCATGCACATCTGCCAAAACTG
GCGACTGGAGCAGAGCATTTTGAACATTAACTGTGGATGCGGGCGGATTG
CGGCTGGAGTGTGCATCAACCTGATGGCGATTGGACAATTTGTTGGCTCC
GTGCTGATTGTGACCGGAAAGAGGATTTATGCGGGGACAGGACTGCTTTG
GCTGGCAGGTTACCTTCGGATAGCCCTCAATCCGACGCAGCGAAACCTCG
CCAAGTACTTCCAGGTGTGCAATGTGATCAGTGCCTTGATGGTCATAATG
CTGAGGTCTCGACGCACCGCCGTTGTCGCGTTCCTGCTGCTTACCTTCGT
GAACTGGAAGGATATGGAGCGGCATTTGTGGCTCGTCTTTTATAATTTCG
GGGAGCAGCTTTTGGGTCATCAGAAAAAGGACCCCGTGGGACTGATGGGC
CTACAGCATGTGGGCATGCAAATCTTGGATGATCCTTCTTTGGCCTCGAG
GGAAAGTTTCTGGCACAAAGTATCCGTGGCTGGCGGATTTATCTTTATTG
TCGTGAATGGACATCTGCATATCATGTTTTAAACTGTCAGTCCATTCAGA
AACAACACCCCTATATATGATGTCGCAAGAAACCGATCCGGAACCAAGTC
TCGTACCGGAGCTGAAATATGAGCCAACCATCACTGCCGATTTTTTTTGC
CTGCACACATCGCCGCCCCTCCACATCGCCCTGCACGGCATGTCGGCCCT
CACCCACACGCGTTTGTCGAAGAACGCATTCGATCTCTGTCTGGAATTGA
TGGAGGCGGGTGTCAAGTCGAAGGCCTTGGCGGACATAGTCCTGTACATA
CTGAACTGCAAGAATGATGCGAAATGATTTATTCTTAGACGCCATAAAAT
TGAAACTTTCCTACAGACACCTGCTGATTAGTCTTATCACGTACGACCTG
ATCAACTCAAGCCTCAAGCCTGGTCGTGATCACTCGCAGAAATCCCTTTT
TTGATAAGCAATATCAGTTATAATTCGCACACACTATTAGCAACCGTCAT
AAATATATGATAAGAGACCAGCTACCCATTGTGCTTGGATTTCAATTTTC
AGACGGGCAAGATAAATTGGCAATAGAAGTTTCCTTTTAGAATATTACCG
ATCAATATATTTAATCTTAGCCGAAAAAAAAAAAAAAAAAAA
FI08021.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 21:08:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17207-RA | 1326 | CG17207-RA | 1..1326 | 1..1326 | 6615 | 99.9 | Plus |
| CG17207.b | 1404 | CG17207.b | 1..1326 | 1..1326 | 6615 | 99.9 | Plus |
| CG17207.a | 1642 | CG17207.a | 1..993 | 1..993 | 4965 | 100 | Plus |
| CG17207.a | 1642 | CG17207.a | 994..1253 | 1067..1326 | 1300 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 09:47:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| chr3R | 27901430 | chr3R | 8263203..8264525 | 1323..1 | 6600 | 99.9 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:20:04 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 09:47:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 12437814..12439139 | 1326..1 | 6615 | 99.9 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:26:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 31820162 | 3R | 12178645..12179970 | 1326..1 | 6615 | 99.9 | Minus |
Blast to na_te.dros performed on 2019-03-16 09:47:19 has no hits.
FI08021.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 09:48:28 Download gff for
FI08021.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| chr3R | 8263203..8264525 | 1..1323 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:57:24 Download gff for
FI08021.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17207-RA | 1..663 | 70..732 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:11:50 Download gff for
FI08021.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17207-RA | 1..663 | 70..732 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 09:51:42 Download gff for
FI08021.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17207-RA | 1..663 | 70..732 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-09-08 12:19:57 Download gff for
FI08021.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17207-RA | 1..663 | 70..732 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 09:45:45 Download gff for
FI08021.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17207-RA | 1..663 | 70..732 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:09:16 Download gff for
FI08021.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17207-RA | 1..1323 | 1..1323 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:11:50 Download gff for
FI08021.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17207-RA | 1..1323 | 1..1323 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:51:42 Download gff for
FI08021.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17207-RA | 1..1323 | 1..1323 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-28 18:06:27 Download gff for
FI08021.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17207-RA | 1..1323 | 1..1323 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:45:45 Download gff for
FI08021.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17207-RA | 1..1323 | 1..1323 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:48:28 Download gff for
FI08021.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 12437817..12439139 | 1..1323 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:48:28 Download gff for
FI08021.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 12437817..12439139 | 1..1323 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:48:28 Download gff for
FI08021.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 12437817..12439139 | 1..1323 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:51:42 Download gff for
FI08021.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 8263539..8264861 | 1..1323 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:42:11 Download gff for
FI08021.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 12178648..12179970 | 1..1323 | 99 | | Minus |
FI08021.pep Sequence
Translation from 69 to 731
> FI08021.pep
MVSIDPIIFQVYHKRVVKMLLSTLARMLIVSSFLADAMHICQNWRLEQSI
LNINCGCGRIAAGVCINLMAIGQFVGSVLIVTGKRIYAGTGLLWLAGYLR
IALNPTQRNLAKYFQVCNVISALMVIMLRSRRTAVVAFLLLTFVNWKDME
RHLWLVFYNFGEQLLGHQKKDPVGLMGLQHVGMQILDDPSLASRESFWHK
VSVAGGFIFIVVNGHLHIMF*
FI08021.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 12:20:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dana\GF17040-PA | 232 | GF17040-PA | 7..219 | 15..208 | 239 | 32.2 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 12:20:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dere\GG17122-PA | 236 | GG17122-PA | 1..236 | 1..220 | 696 | 61.4 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:25:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17207-PA | 220 | CG17207-PA | 1..220 | 1..220 | 1140 | 100 | Plus |
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 12:20:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dmoj\GI15219-PA | 228 | GI15219-PA | 8..224 | 17..213 | 180 | 25.8 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 12:20:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dsec\GM26005-PA | 220 | GM26005-PA | 1..220 | 1..220 | 978 | 84.1 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 12:20:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dsim\GD20563-PA | 220 | GD20563-PA | 1..220 | 1..220 | 975 | 83.2 | Plus |
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 12:20:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dwil\GK15560-PA | 230 | GK15560-PA | 1..230 | 4..216 | 214 | 27.5 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 12:20:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dyak\GE24514-PA | 236 | GE24514-PA | 1..236 | 1..220 | 723 | 62.7 | Plus |
FI08021.hyp Sequence
Translation from 69 to 731
> FI08021.hyp
MVSIDPIIFQVYHKRVVKMLLSTLARMLIVSSFLADAMHICQNWRLEQSI
LNINCGCGRIAAGVCINLMAIGQFVGSVLIVTGKRIYAGTGLLWLAGYLR
IALNPTQRNLAKYFQVCNVISALMVIMLRSRRTAVVAFLLLTFVNWKDME
RHLWLVFYNFGEQLLGHQKKDPVGLMGLQHVGMQILDDPSLASRESFWHK
VSVAGGFIFIVVNGHLHIMF*
FI08021.hyp Blast Records
Blast to dmel-all-translation-r6.23.fasta performed 2023-01-03 19:54:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17207-PA | 220 | CG17207-PA | 1..220 | 1..220 | 1140 | 100 | Plus |
FI08021.pep2 Sequence
Translation from 769 to 1026
> FI08021.pep2
MSQETDPEPSLVPELKYEPTITADFFCLHTSPPLHIALHGMSALTHTRLS
KNAFDLCLELMEAGVKSKALADIVLYILNCKNDAK*
FI08021.pep2 Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2023-01-03 19:54:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dana\GF17041-PA | 90 | GF17041-PA | 14..88 | 8..85 | 215 | 53.8 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2023-01-03 19:54:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dere\GG17123-PA | 85 | GG17123-PA | 1..83 | 1..83 | 311 | 72.3 | Plus |
Blast to dgri-all-translation-r1.3.fasta performed 2023-01-03 19:54:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dgri\GH19672-PA | 104 | GH19672-PA | 35..89 | 24..79 | 158 | 58.9 | Plus |
Blast to dmoj-all-translation-r1.3.fasta performed 2023-01-03 19:54:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dmoj\GI22275-PA | 79 | GI22275-PA | 12..66 | 25..81 | 152 | 52.6 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2023-01-03 19:54:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dsec\GM26006-PA | 85 | GM26006-PA | 1..85 | 1..85 | 395 | 89.4 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2023-01-03 19:54:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dsim\GD20564-PA | 92 | GD20564-PA | 1..84 | 1..84 | 383 | 88.1 | Plus |
Blast to dvir-all-translation-r1.2.fasta performed 2023-01-03 19:54:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\GJ24068-PA | 245 | GJ24068-PA | 178..232 | 27..81 | 172 | 56.4 | Plus |
Blast to dwil-all-translation-r1.3.fasta performed 2023-01-03 19:54:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dwil\GK14562-PA | 86 | GK14562-PA | 24..77 | 29..82 | 137 | 51.9 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2023-01-03 19:54:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dyak\GE24515-PA | 83 | GE24515-PA | 1..80 | 1..82 | 294 | 75.6 | Plus |
