FI08026.complete Sequence
939 bp assembled on 2008-07-28
GenBank Submission: BT044372.1
> FI08026.complete
TTACAAACGGTTTTATCCATGAGTATTTCCGTACTTTCCACACTTGCTTA
TTTTTACACAGTCTAACTAATTGTTCGCGTTCAAACCGAAATTCCAAATT
AGGAACGTAACTCTAGGATCGATGGCCTCACCTAGTCGGAGTTCCCAGCG
ATCCCTGCTTAACGCAGGCCTCCAATTGTTTACCACAAAGCTGGGTAGGA
CCCAGCACACGCTTCCGCTGAGTGATTTATCCTCGCTGCATGGTGTCGAC
CTACATCATCAGAATACTGTACCGACTGGGATGTCCCAGCAGCTGGCGGA
TGTCCAGAAGCGCACCCAATTTCTTGAGGAGCGGAACCGCCAGCTCAGGA
ATCTGGCGCTGGATAAATCTGACCTCTTCGAGTCACGAACTGCCATGCTG
TGCTCCCGAGCTTTCGACATCAGTCAGGAACTGTTCGTAACCAGGATGAG
GATTAACGACGTGGAGAACGCCTGCACTGAACTTCGAAGTCGCATCCTGG
ACGTAAAGCTGCGACGCATCCAGCGTCTCCGGCTCCTCTGCCACGAGATA
CAGAAACTGCAAGAAGCACTGGAACACCAGCTGCCCCCGATCCTGATGCA
CGTCTGGCACAGACTTTGTTTCCTATGGAACTGTGTGGACTGCCTGGCGC
TTGTGTCCTGCGGGGCCCGTCCCGTCTTCGAGGCAGAGAGCAAAATGGAT
AAAATGGATGCCCTCAATCTCTTCGTGGCGGGCTTCTGACATGTTCCGCC
TTGTCCTGGCCCTTTAGTATTTTAAACACTGGTTATCGAGCACCGCCGAG
TTATCGACAGTAATCGGCTAATCGAGTCGGGAAAAAGTTACTTTAAACCA
TTGTAAATCACTATAGAATACCGACACTGAAATGTAGAATGTAGTCATAA
AACTTTTTTATTACGTGTTTAAAAAAAAAAAAAAAAAAA
FI08026.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 21:03:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14054-RA | 920 | CG14054-RA | 1..920 | 1..920 | 4570 | 99.7 | Plus |
nc_21514.a | 681 | nc_21514.a | 1..251 | 738..488 | 1255 | 100 | Minus |
nc_21514.a | 681 | nc_21514.a | 418..563 | 356..211 | 730 | 100 | Minus |
nc_21514.a | 681 | nc_21514.a | 290..366 | 431..355 | 385 | 100 | Minus |
Blast to d_melanogaster_OreR.fa performed 2019-03-15 11:50:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chrX | 22417052 | chrX | 1959187..1959619 | 920..488 | 2165 | 100 | Minus |
chrX | 22417052 | chrX | 1960063..1960273 | 211..1 | 1055 | 100 | Minus |
chrX | 22417052 | chrX | 1959858..1960003 | 356..211 | 730 | 100 | Minus |
chrX | 22417052 | chrX | 1959672..1959806 | 489..355 | 675 | 100 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:20:08 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 11:50:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 2065271..2065705 | 922..488 | 2175 | 100 | Minus |
X | 23542271 | X | 2066149..2066359 | 211..1 | 1025 | 99.1 | Minus |
X | 23542271 | X | 2065944..2066089 | 356..211 | 730 | 100 | Minus |
X | 23542271 | X | 2065758..2065892 | 489..355 | 675 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:21:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23527363 | X | 2073369..2073803 | 922..488 | 2175 | 100 | Minus |
X | 23527363 | X | 2074247..2074457 | 211..1 | 1025 | 99 | Minus |
X | 23527363 | X | 2074042..2074187 | 356..211 | 730 | 100 | Minus |
X | 23527363 | X | 2073856..2073990 | 489..355 | 675 | 100 | Minus |
Blast to na_te.dros performed on 2019-03-15 11:50:42 has no hits.
FI08026.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 11:51:32 Download gff for
FI08026.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chrX | 1959859..1960002 | 212..355 | 100 | <- | Minus |
chrX | 1959187..1959617 | 490..920 | 100 | <- | Minus |
chrX | 1959672..1959805 | 356..489 | 100 | <- | Minus |
chrX | 1960063..1960273 | 1..211 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:57:29 Download gff for
FI08026.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14054-RA | 1..618 | 122..739 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:04:19 Download gff for
FI08026.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14054-RA | 1..618 | 122..739 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:33:37 Download gff for
FI08026.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14054-RA | 1..618 | 122..739 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-09-08 12:18:14 Download gff for
FI08026.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14054-RA | 1..618 | 122..739 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:43:59 Download gff for
FI08026.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14054-RA | 1..618 | 122..739 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:24:37 Download gff for
FI08026.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14054-RA | 1..920 | 1..920 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:04:18 Download gff for
FI08026.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14054-RA | 1..920 | 1..920 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:33:37 Download gff for
FI08026.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14054-RA | 1..920 | 1..920 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-28 11:45:21 Download gff for
FI08026.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14054-RA | 1..916 | 1..916 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:43:59 Download gff for
FI08026.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14054-RA | 1..920 | 1..920 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:51:32 Download gff for
FI08026.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 2065273..2065703 | 490..920 | 100 | <- | Minus |
X | 2065758..2065891 | 356..489 | 100 | <- | Minus |
X | 2065945..2066088 | 212..355 | 100 | <- | Minus |
X | 2066149..2066359 | 1..211 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:51:32 Download gff for
FI08026.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 2065273..2065703 | 490..920 | 100 | <- | Minus |
X | 2065758..2065891 | 356..489 | 100 | <- | Minus |
X | 2065945..2066088 | 212..355 | 100 | <- | Minus |
X | 2066149..2066359 | 1..211 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 11:51:32 Download gff for
FI08026.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 2065273..2065703 | 490..920 | 100 | <- | Minus |
X | 2065758..2065891 | 356..489 | 100 | <- | Minus |
X | 2065945..2066088 | 212..355 | 100 | <- | Minus |
X | 2066149..2066359 | 1..211 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:33:37 Download gff for
FI08026.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 1959306..1959736 | 490..920 | 100 | <- | Minus |
arm_X | 1959791..1959924 | 356..489 | 100 | <- | Minus |
arm_X | 1959978..1960121 | 212..355 | 100 | <- | Minus |
arm_X | 1960182..1960392 | 1..211 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:32:40 Download gff for
FI08026.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 2073371..2073801 | 490..920 | 100 | <- | Minus |
X | 2073856..2073989 | 356..489 | 100 | <- | Minus |
X | 2074043..2074186 | 212..355 | 100 | <- | Minus |
X | 2074247..2074457 | 1..211 | 99 | | Minus |
FI08026.pep Sequence
Translation from 121 to 738
> FI08026.pep
MASPSRSSQRSLLNAGLQLFTTKLGRTQHTLPLSDLSSLHGVDLHHQNTV
PTGMSQQLADVQKRTQFLEERNRQLRNLALDKSDLFESRTAMLCSRAFDI
SQELFVTRMRINDVENACTELRSRILDVKLRRIQRLRLLCHEIQKLQEAL
EHQLPPILMHVWHRLCFLWNCVDCLALVSCGARPVFEAESKMDKMDALNL
FVAGF*
FI08026.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 18:18:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF22228-PA | 274 | GF22228-PA | 115..272 | 43..203 | 283 | 45.1 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 18:18:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG12654-PA | 204 | GG12654-PA | 1..204 | 1..205 | 773 | 73.4 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:59:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14054-PA | 205 | CG14054-PA | 1..205 | 1..205 | 1055 | 100 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 18:18:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM18922-PA | 512 | GM18922-PA | 339..512 | 31..205 | 734 | 84.2 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 18:18:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD24616-PA | 204 | GD24616-PA | 1..204 | 1..205 | 865 | 85.5 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 18:18:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE16983-PA | 204 | GE16983-PA | 1..204 | 1..205 | 777 | 77.8 | Plus |
FI08026.hyp Sequence
Translation from 121 to 738
> FI08026.hyp
MASPSRSSQRSLLNAGLQLFTTKLGRTQHTLPLSDLSSLHGVDLHHQNTV
PTGMSQQLADVQKRTQFLEERNRQLRNLALDKSDLFESRTAMLCSRAFDI
SQELFVTRMRINDVENACTELRSRILDVKLRRIQRLRLLCHEIQKLQEAL
EHQLPPILMHVWHRLCFLWNCVDCLALVSCGARPVFEAESKMDKMDALNL
FVAGF*
FI08026.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:38:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14054-PA | 205 | CG14054-PA | 1..205 | 1..205 | 1055 | 100 | Plus |