BDGP Sequence Production Resources |
Search the DGRC for FI08027
Library: | FI |
Tissue Source: | various Drosophila melanogaster |
Created by: | |
Date Registered: | 2005-11-08 |
Comments: | Drosophila melanogaster corrected cDNA clones |
Original Plate Number: | 80 |
Well: | 27 |
Vector: | pOTB7 |
Associated Gene/Transcript | LS2-RA |
Protein status: | FI08027.pep: gold |
Sequenced Size: | 1428 |
Gene | Date | Evidence |
---|---|---|
CG3162 | 2008-08-15 | Release 5.9 accounting |
CG3162 | 2008-12-18 | 5.12 accounting |
1428 bp assembled on 2008-08-14
GenBank Submission: BT044373.1
> FI08027.complete CACCAACAAGGCCTGGTGTTCGGTGATTTTAGCTGAAAAGTATGAGACGT TTTCGGCCCATGAATCGTTCTTGGAATGCTCTGCGTTCGCGTTCACGTTC ACGTTCACGTTCGCGTTCGCCTTTCCGTTCGCAATCCATTACTCGATCCC GGCCCACCCGTTCGGATACCATTTACACAGAGAGGACGCGATTGCAGCGA CGTTTCAGTCGGCCTCCCTCCTCCTGGGACATTCCACCAGAGGGTTATAA CCACCTGACTCCGCAACAGTACAAGGCCATGCTGGCCAGCGGCCAGATTG CCTCGAGGATTCTTTCCGATGGCGTACACGGGGGCGAGTCCGCCGCGATT TCGATGATCACTCGACAAGCTCGCCGCCTGTATGTGGGTAATATTCCATT CGGAGTTACGGATGAGGAGATGATGCAGTTCTTCAATCATCAGATCATGG CTCTGGGATTTGAAGCAAAAAGCTCGCACTACATGGATGGCAATGCTGTG CTGACCTGCCAAACGAATCTGGAGAAGAACTTTGCCTTTCTGGAATTCCG ATCCATTGACGAGGCCAGCCAGGCCTTGAATTTCGATGGGATGGTCTTCC GTGGACAAACCTTGAAGATAAGACGGCCACACGACTATCAGCCAGTGCCC TCGATTTCAGTCTCTGCAATGGAGAGCTACAGGTCATTCAGGGTCCCTGC CATCAATGTAGCCCAACAACCGGCTGTTACCCTTCCTGTGACCACTATTG TCCCCGATTCCCCCAATAAGATCTACGTAGGTGGCTTGCCCACCTGCCTG AATCAGGATCAGGTCAAGGAACTGCTGCAGTCGTTTGGAGAACTGAAAGG ACTGAATCTGGTGATGGATACCAACACGAACCTGAACAAGGGTTTCGCCT TCTTTGAGTACTGCGATCCCTCGGTTACCGATCACGCCATAGCTGGATTG CACGGCATGCTGCTGGGGGATCGCAGGCTGGTGGTCCAGAGATCTATTCC AGGCGGAAAGAACGCATTCCCCGGCCACTTACCAACCGTTCTTCAGGTAC CGGGCATATCCACACTACAAGATCCTGGCTCACCTACCGAAACTCTCTGC CTGCTGAACATGGTGCGGCCGGAGGAGCTGCTGGACGACGAGGAGTTCGA GGACATTCGCACGGACATCAAGCAGGAGTGCGCCAAGTTCGGCGAGGTTC GCAGCATCAAGATTCCGCGTCCCATCGGTCAATTTCCGAAGCGGGGCTGT GGCAAGGTCTTCGTCCAGTTCGAATCCGTGGAGGATTCGCAGAAGGCCCT TAAGGCATTGAGTGGTCGCAAGTTCAGCGGGCGCATAGTGATGACCTCGT ATTACGATCCCGAAAAGTACCTGGCGGATGATCTACAATAAAGTCGAAAT ATTAACCATAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3162-RA | 1415 | CG3162-RA | 1..1405 | 1..1405 | 6995 | 99.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 19096534..19097938 | 1405..1 | 6980 | 99.8 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 23210135..23211539 | 1405..1 | 6995 | 99.9 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 23211334..23212738 | 1405..1 | 6995 | 99.8 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 19096529..19097938 | 1..1409 | 97 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3162-RA | 1..1350 | 42..1391 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3162-RA | 1..1350 | 42..1391 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
LS2-RA | 1..1350 | 42..1391 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3162-RA | 1..1350 | 42..1391 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
LS2-RA | 1..1350 | 42..1391 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3162-RA | 1..1410 | 1..1409 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3162-RA | 1..1410 | 1..1409 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
LS2-RA | 1..1410 | 1..1409 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3162-RA | 1..1410 | 1..1409 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
LS2-RA | 1..1410 | 1..1409 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 23210130..23211539 | 1..1409 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 23210130..23211539 | 1..1409 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 23210130..23211539 | 1..1409 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 19097653..19099062 | 1..1409 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 23211347..23212756 | 1..1409 | 99 | Minus |
Translation from 41 to 1390
> FI08027.pep MRRFRPMNRSWNALRSRSRSRSRSRSPFRSQSITRSRPTRSDTIYTERTR LQRRFSRPPSSWDIPPEGYNHLTPQQYKAMLASGQIASRILSDGVHGGES AAISMITRQARRLYVGNIPFGVTDEEMMQFFNHQIMALGFEAKSSHYMDG NAVLTCQTNLEKNFAFLEFRSIDEASQALNFDGMVFRGQTLKIRRPHDYQ PVPSISVSAMESYRSFRVPAINVAQQPAVTLPVTTIVPDSPNKIYVGGLP TCLNQDQVKELLQSFGELKGLNLVMDTNTNLNKGFAFFEYCDPSVTDHAI AGLHGMLLGDRRLVVQRSIPGGKNAFPGHLPTVLQVPGISTLQDPGSPTE TLCLLNMVRPEELLDDEEFEDIRTDIKQECAKFGEVRSIKIPRPIGQFPK RGCGKVFVQFESVEDSQKALKALSGRKFSGRIVMTSYYDPEKYLADDLQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13310-PA | 434 | GF13310-PA | 11..434 | 19..449 | 1416 | 68.5 | Plus |
Dana\GF19596-PA | 416 | GF19596-PA | 39..411 | 57..443 | 1148 | 57.4 | Plus |
Dana\GF25032-PA | 643 | GF25032-PA | 130..303 | 112..319 | 159 | 25.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20057-PA | 440 | GG20057-PA | 36..440 | 42..449 | 1740 | 79.4 | Plus |
Dere\GG19328-PA | 416 | GG19328-PA | 39..411 | 57..443 | 1144 | 57.1 | Plus |
Dere\GG14596-PA | 731 | GG14596-PA | 225..398 | 112..319 | 163 | 25.4 | Plus |
Dere\GG11065-PA | 200 | GG11065-PA | 103..194 | 347..443 | 153 | 38.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH23055-PA | 453 | GH23055-PA | 43..453 | 25..449 | 1204 | 56.6 | Plus |
Dgri\GH12033-PA | 416 | GH12033-PA | 39..411 | 57..443 | 1138 | 56.6 | Plus |
Dgri\GH15204-PA | 643 | GH15204-PA | 133..306 | 112..319 | 163 | 25.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
LS2-PA | 449 | CG3162-PA | 1..449 | 1..449 | 2332 | 100 | Plus |
U2af50-PB | 427 | CG9998-PB | 14..422 | 12..443 | 1130 | 54.9 | Plus |
U2af50-PD | 416 | CG9998-PD | 6..411 | 15..443 | 1129 | 55.1 | Plus |
U2af50-PA | 416 | CG9998-PA | 6..411 | 15..443 | 1129 | 55.1 | Plus |
U2af50-PC | 360 | CG9998-PC | 2..355 | 76..443 | 1036 | 57.6 | Plus |
hfp-PJ | 545 | CG12085-PJ | 39..212 | 112..319 | 162 | 25.4 | Plus |
hfp-PI | 545 | CG12085-PI | 39..212 | 112..319 | 162 | 25.4 | Plus |
hfp-PH | 545 | CG12085-PH | 39..212 | 112..319 | 162 | 25.4 | Plus |
hfp-PG | 545 | CG12085-PG | 39..212 | 112..319 | 162 | 25.4 | Plus |
hfp-PF | 545 | CG12085-PF | 39..212 | 112..319 | 162 | 25.4 | Plus |
hfp-PE | 545 | CG12085-PE | 39..212 | 112..319 | 162 | 25.4 | Plus |
hfp-PB | 545 | CG12085-PB | 39..212 | 112..319 | 162 | 25.4 | Plus |
hfp-PD | 545 | CG12085-PD | 39..212 | 112..319 | 162 | 25.4 | Plus |
hfp-PC | 545 | CG12085-PC | 39..212 | 112..319 | 162 | 25.4 | Plus |
hfp-PA | 637 | CG12085-PA | 131..304 | 112..319 | 162 | 25.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21125-PA | 427 | GI21125-PA | 28..427 | 38..449 | 1334 | 62.6 | Plus |
Dmoj\GI14308-PA | 416 | GI14308-PA | 39..411 | 57..443 | 1138 | 56.6 | Plus |
Dmoj\GI16722-PA | 616 | GI16722-PA | 110..283 | 112..319 | 166 | 25.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11290-PA | 487 | GL11290-PA | 59..487 | 48..448 | 1184 | 53.9 | Plus |
Dper\GL15893-PA | 418 | GL15893-PA | 33..413 | 50..443 | 1147 | 57 | Plus |
Dper\GL22585-PA | 653 | GL22585-PA | 131..304 | 112..319 | 161 | 25.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA16338-PA | 491 | GA16338-PA | 63..491 | 48..448 | 1182 | 54.5 | Plus |
Dpse\GA22177-PA | 418 | GA22177-PA | 33..413 | 50..443 | 1147 | 57 | Plus |
Dpse\GA11385-PA | 653 | GA11385-PA | 131..304 | 112..319 | 161 | 25.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM15574-PA | 445 | GM15574-PA | 1..445 | 1..449 | 1958 | 89.3 | Plus |
Dsec\GM13406-PA | 416 | GM13406-PA | 39..411 | 57..443 | 1144 | 57.1 | Plus |
Dsec\GM14211-PA | 616 | GM14211-PA | 110..283 | 112..319 | 159 | 25.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25073-PA | 445 | GD25073-PA | 1..445 | 1..449 | 1955 | 89.3 | Plus |
Dsim\GD24494-PA | 416 | GD24494-PA | 39..411 | 57..443 | 1144 | 57.1 | Plus |
Dsim\GD13472-PA | 541 | GD13472-PA | 110..283 | 112..319 | 163 | 25.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20975-PA | 428 | GJ20975-PA | 25..428 | 35..449 | 1366 | 63.6 | Plus |
Dvir\GJ19364-PA | 476 | GJ19364-PA | 283..471 | 258..443 | 588 | 60.3 | Plus |
Dvir\GJ19364-PA | 476 | GJ19364-PA | 39..245 | 57..279 | 558 | 50.4 | Plus |
Dvir\GJ12466-PA | 645 | GJ12466-PA | 144..317 | 112..319 | 167 | 25.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK19586-PA | 466 | GK19586-PA | 61..461 | 35..443 | 1279 | 61.3 | Plus |
Dwil\GK10063-PA | 416 | GK10063-PA | 39..411 | 57..443 | 1149 | 57.4 | Plus |
Dwil\GK17204-PA | 631 | GK17204-PA | 111..284 | 112..319 | 162 | 25.4 | Plus |
Dwil\GK23713-PA | 443 | GK23713-PA | 324..437 | 325..443 | 159 | 35.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE11595-PA | 437 | GE11595-PA | 33..437 | 42..449 | 1774 | 80.4 | Plus |
Dyak\GE15975-PA | 416 | GE15975-PA | 39..411 | 57..443 | 1144 | 57.1 | Plus |
Dyak\GE20955-PA | 637 | GE20955-PA | 131..304 | 112..319 | 160 | 25.4 | Plus |
Translation from 41 to 1390
> FI08027.hyp MRRFRPMNRSWNALRSRSRSRSRSRSPFRSQSITRSRPTRSDTIYTERTR LQRRFSRPPSSWDIPPEGYNHLTPQQYKAMLASGQIASRILSDGVHGGES AAISMITRQARRLYVGNIPFGVTDEEMMQFFNHQIMALGFEAKSSHYMDG NAVLTCQTNLEKNFAFLEFRSIDEASQALNFDGMVFRGQTLKIRRPHDYQ PVPSISVSAMESYRSFRVPAINVAQQPAVTLPVTTIVPDSPNKIYVGGLP TCLNQDQVKELLQSFGELKGLNLVMDTNTNLNKGFAFFEYCDPSVTDHAI AGLHGMLLGDRRLVVQRSIPGGKNAFPGHLPTVLQVPGISTLQDPGSPTE TLCLLNMVRPEELLDDEEFEDIRTDIKQECAKFGEVRSIKIPRPIGQFPK RGCGKVFVQFESVEDSQKALKALSGRKFSGRIVMTSYYDPEKYLADDLQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
LS2-PA | 449 | CG3162-PA | 1..449 | 1..449 | 2332 | 100 | Plus |
U2af50-PB | 427 | CG9998-PB | 14..422 | 12..443 | 1130 | 54.9 | Plus |
U2af50-PD | 416 | CG9998-PD | 6..411 | 15..443 | 1129 | 55.1 | Plus |
U2af50-PA | 416 | CG9998-PA | 6..411 | 15..443 | 1129 | 55.1 | Plus |
U2af50-PC | 360 | CG9998-PC | 2..355 | 76..443 | 1036 | 57.6 | Plus |