Clone FI08030 Report

Search the DGRC for FI08030

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:80
Well:30
Vector:pOTB7
Associated Gene/TranscriptCG9961-RA
Protein status:FI08030.pep: gold
Sequenced Size:1458

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG9961 2008-08-15 Release 5.9 accounting
CG9961 2008-12-18 5.12 accounting

Clone Sequence Records

FI08030.complete Sequence

1458 bp assembled on 2008-08-14

GenBank Submission: BT044375.1

> FI08030.complete
TTTATTTAATATGCTTCCAATTCGGCAGAGTTTATACCAAAGAGCTCAAA
CTCGATTTACAAAATTAAGATTTCCAAGATTTTTTAGCAAAGACGATTGC
AATGGAAAGCAAGTAAAGAAGTTGAGCTTAAAAAATGTAGATGTGGCTGG
GAAAAGGGTTTTTATGAGAGTGGACTTTAATGTACCCATGAAAGATGGCA
AAATAACCAACAACCAACGAATTGTTTCCGCACTTCCCAGTATTAAATAT
GCCTTGGACAAGAAATGTAAGTCCTTGGTTTTGGCATCCCACTTGGGGCG
TCCGGATGGCAAAAAGAACAAAAAGTTTAGCCTGGAACCCGTGGCCAAGG
AGCTGGAGAGTGTGCTGGGCCAGCCGGTTCAATTCCTGGACGACTGCGTG
GGTGATAGCACCCTGAGAGCTTTGAAGGATCCCTCCGACGGCACTGTGTT
CCTGTTGGAGAATCTTCGTTTCTATGCCGAGGAGACGGGCAGCAGCAAGG
ACGATAACAAGAAGAAGGTCAAAGCAGATCCCGCGAAGGTGAAGGAATTC
CGAGCCAAGTTGGCGCAGCTGGGCGAGATCTATGTGAACGATGCCTTTGG
AACAGCACATCGTCCGCATAGTTCCATGATGGGCGATGGCTACAAGGTGC
GAGCGGCTGGTTTCCTGCTGGACAAGGAACTGGAGTACTTTGCCAAGGTT
CTCCACGATCCGGCCAAGCCCTTTTTGGCCATTCTGGGTGGCGCCAAGAT
AGCCGATAAAATTCCACTGATAACGAACCTCCTGAACAATGTAACGGCCA
TGATCATATCCGGTGGCATGGCCTTCACCTTTCTCAAAGTGCTCAATGGC
ATGGAGATTGGAAAGTCCCTCTTCGACGAGAAGGGATCCGAGTTGGTCAA
CGACATAGTCTGCAAGGCGAAGGAGAAGGACGTGAATATACTATTTCCGA
TTGACTTTGTCATAGCCAATAAGATCGACAAGGAGCCGGATAAAGTGGAA
CATGTGGATGCCACACAGGGCATACCGGAGGACATGATGGGTCTGGACCA
CGGCCAGGCATCCAGTCAGATGTTTGCTGGCGCTATTTGTGCATCCAAAA
CCATCGTCTGGAACGGACCGCCAGGCTTGTTCGAAAACGAGCTATTCTCC
AAAGGCACCGAGTCCATGCTGGAGGCAGTAATCGGGGCCACTAACCGAGG
AGCCACCACAATCGTTGGTGGTGGGGATACGGCCACCGCTTGCTTGAAGT
TCGGAGGCGCCGACAAGGTCTCGCATGTGTCCACCGGTGGAGGAGCTTCC
CTGGAGTTGCTGGAGGGTAAGGTTCTGCCTGGAGTGGCTGCCCTTTCGGA
TGCCTAAACGCACTGCTTTACAATGGTTATTCCACTTATATGTACATGTA
TCTTAAATTCAATTTGGACAATTTAAACAATCAGTCTCTCAAAAAAAAAA
AAAAAAAA

FI08030.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:04:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG9961-RA 1468 CG9961-RA 20..1463 1..1444 7205 99.9 Plus
CG9961.a 1597 CG9961.a 426..1592 278..1444 5820 99.9 Plus
CG9961.a 1597 CG9961.a 160..427 1..268 1340 100 Plus
Pgk-RA 1841 Pgk-RA 837..1012 515..690 340 79.5 Plus
Pgk-RA 1841 Pgk-RA 1041..1211 719..889 210 74.8 Plus
Pgk-RA 1841 Pgk-RA 609..695 287..373 180 80.4 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 18:57:45
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 2743104..2744271 1440..273 5810 99.8 Minus
chr2L 23010047 chr2L 2744496..2744663 168..1 840 100 Minus
chr2L 23010047 chr2L 2744331..2744443 279..167 565 100 Minus
chr2L 23010047 chr2L 2747263..2747637 889..515 480 75.2 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:20:11 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 18:57:43
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 2743371..2744542 1444..273 5830 99.8 Minus
2L 23513712 2L 2744767..2744934 168..1 840 100 Minus
2L 23513712 2L 2744602..2744714 279..167 565 100 Minus
2L 23513712 2L 2747535..2747909 889..515 480 75.2 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:23:09
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 2743371..2744542 1444..273 5830 99.8 Minus
2L 23513712 2L 2744767..2744934 168..1 840 100 Minus
2L 23513712 2L 2744602..2744714 279..167 565 100 Minus
2L 23513712 2L 2747734..2747909 690..515 340 79.5 Minus
2L 23513712 2L 2747535..2747705 889..719 210 74.8 Minus
2L 23513712 2L 2748051..2748137 373..287 180 80.4 Minus
Blast to na_te.dros performed on 2019-03-15 18:57:43 has no hits.

FI08030.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 18:58:34 Download gff for FI08030.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 2743104..2744266 278..1440 99 <- Minus
chr2L 2744333..2744441 169..277 100 <- Minus
chr2L 2744496..2744663 1..168 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:57:36 Download gff for FI08030.complete
Subject Subject Range Query Range Percent Splice Strand
CG9961-RA 1..1347 11..1357 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:06:51 Download gff for FI08030.complete
Subject Subject Range Query Range Percent Splice Strand
CG9961-RA 1..1347 11..1357 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:37:59 Download gff for FI08030.complete
Subject Subject Range Query Range Percent Splice Strand
CG9961-RA 1..1347 11..1357 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-09-08 12:18:20 Download gff for FI08030.complete
Subject Subject Range Query Range Percent Splice Strand
CG9961-RA 1..1347 11..1357 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:06:30 Download gff for FI08030.complete
Subject Subject Range Query Range Percent Splice Strand
CG9961-RA 1..1347 11..1357 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:31:48 Download gff for FI08030.complete
Subject Subject Range Query Range Percent Splice Strand
CG9961-RA 1..1440 1..1440 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:06:51 Download gff for FI08030.complete
Subject Subject Range Query Range Percent Splice Strand
CG9961-RA 1..1440 1..1440 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:37:59 Download gff for FI08030.complete
Subject Subject Range Query Range Percent Splice Strand
CG9961-RA 1..1440 1..1440 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-14 11:29:30 Download gff for FI08030.complete
Subject Subject Range Query Range Percent Splice Strand
CG9961-RA 1..1440 1..1440 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:06:30 Download gff for FI08030.complete
Subject Subject Range Query Range Percent Splice Strand
CG9961-RA 1..1440 1..1440 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:58:34 Download gff for FI08030.complete
Subject Subject Range Query Range Percent Splice Strand
2L 2744604..2744712 169..277 100 <- Minus
2L 2744767..2744934 1..168 100   Minus
2L 2743375..2744537 278..1440 99 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:58:34 Download gff for FI08030.complete
Subject Subject Range Query Range Percent Splice Strand
2L 2744604..2744712 169..277 100 <- Minus
2L 2744767..2744934 1..168 100   Minus
2L 2743375..2744537 278..1440 99 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:58:34 Download gff for FI08030.complete
Subject Subject Range Query Range Percent Splice Strand
2L 2744604..2744712 169..277 100 <- Minus
2L 2744767..2744934 1..168 100   Minus
2L 2743375..2744537 278..1440 99 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:37:59 Download gff for FI08030.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 2743375..2744537 278..1440 99 <- Minus
arm_2L 2744604..2744712 169..277 100 <- Minus
arm_2L 2744767..2744934 1..168 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:35:58 Download gff for FI08030.complete
Subject Subject Range Query Range Percent Splice Strand
2L 2743375..2744537 278..1440 99 <- Minus
2L 2744604..2744712 169..277 100 <- Minus
2L 2744767..2744934 1..168 100   Minus

FI08030.pep Sequence

Translation from 1 to 1356

> FI08030.pep
LFNMLPIRQSLYQRAQTRFTKLRFPRFFSKDDCNGKQVKKLSLKNVDVAG
KRVFMRVDFNVPMKDGKITNNQRIVSALPSIKYALDKKCKSLVLASHLGR
PDGKKNKKFSLEPVAKELESVLGQPVQFLDDCVGDSTLRALKDPSDGTVF
LLENLRFYAEETGSSKDDNKKKVKADPAKVKEFRAKLAQLGEIYVNDAFG
TAHRPHSSMMGDGYKVRAAGFLLDKELEYFAKVLHDPAKPFLAILGGAKI
ADKIPLITNLLNNVTAMIISGGMAFTFLKVLNGMEIGKSLFDEKGSELVN
DIVCKAKEKDVNILFPIDFVIANKIDKEPDKVEHVDATQGIPEDMMGLDH
GQASSQMFAGAICASKTIVWNGPPGLFENELFSKGTESMLEAVIGATNRG
ATTIVGGGDTATACLKFGGADKVSHVSTGGGASLELLEGKVLPGVAALSD
A*

FI08030.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 01:42:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF13876-PA 396 GF13876-PA 1..396 55..451 1631 80.4 Plus
Dana\GF13875-PA 415 GF13875-PA 5..415 40..451 1319 62.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 01:42:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG24499-PA 448 GG24499-PA 1..448 4..451 2159 90.6 Plus
Dere\GG24497-PA 415 GG24497-PA 5..415 40..451 1313 62.1 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 01:42:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH10572-PA 416 GH10572-PA 3..415 39..451 1587 73.1 Plus
Dgri\GH10571-PA 415 GH10571-PA 5..415 40..451 1316 62.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:41:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG9961-PA 448 CG9961-PA 1..448 4..451 2289 100 Plus
Pgk-PE 415 CG3127-PE 5..415 40..451 1298 62.6 Plus
Pgk-PD 415 CG3127-PD 5..415 40..451 1298 62.6 Plus
Pgk-PC 415 CG3127-PC 5..415 40..451 1298 62.6 Plus
Pgk-PB 415 CG3127-PB 5..415 40..451 1298 62.6 Plus
Pgk-PA 415 CG3127-PA 5..415 40..451 1298 62.6 Plus
CG9961-PB 102 CG9961-PB 1..93 4..96 445 93.5 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 01:42:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI22945-PA 463 GI22945-PA 49..461 39..451 1523 71.7 Plus
Dmoj\GI22935-PA 415 GI22935-PA 5..415 40..451 1305 61.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 01:42:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL26450-PA 448 GL26450-PA 22..448 27..451 1786 81 Plus
Dper\GL26449-PA 415 GL26449-PA 5..415 40..451 1313 61.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 01:42:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA22152-PA 451 GA22152-PA 27..451 29..451 1782 81.4 Plus
Dpse\GA16139-PA 415 GA16139-PA 5..415 40..451 1313 61.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 01:42:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM18206-PA 448 GM18206-PA 1..448 4..451 2262 95.3 Plus
Dsec\GM18205-PA 415 GM18205-PA 5..415 40..451 1313 62.4 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 01:42:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD22811-PA 448 GD22811-PA 1..448 4..451 2255 95.1 Plus
Dsim\GD22810-PA 415 GD22810-PA 5..415 40..451 1320 62.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 01:42:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ23491-PA 461 GJ23491-PA 28..460 18..451 1557 70.4 Plus
Dvir\GJ23480-PA 415 GJ23480-PA 5..415 40..451 1321 62.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 01:42:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK24483-PA 466 GK24483-PA 55..464 41..451 1654 76.6 Plus
Dwil\GK24482-PA 415 GK24482-PA 5..415 40..451 1329 63.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 01:42:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE15053-PA 397 GE15053-PA 1..397 55..451 1946 92.4 Plus
Dyak\GE15048-PA 415 GE15048-PA 5..415 40..451 1313 62.1 Plus

FI08030.hyp Sequence

Translation from 1 to 1356

> FI08030.hyp
LFNMLPIRQSLYQRAQTRFTKLRFPRFFSKDDCNGKQVKKLSLKNVDVAG
KRVFMRVDFNVPMKDGKITNNQRIVSALPSIKYALDKKCKSLVLASHLGR
PDGKKNKKFSLEPVAKELESVLGQPVQFLDDCVGDSTLRALKDPSDGTVF
LLENLRFYAEETGSSKDDNKKKVKADPAKVKEFRAKLAQLGEIYVNDAFG
TAHRPHSSMMGDGYKVRAAGFLLDKELEYFAKVLHDPAKPFLAILGGAKI
ADKIPLITNLLNNVTAMIISGGMAFTFLKVLNGMEIGKSLFDEKGSELVN
DIVCKAKEKDVNILFPIDFVIANKIDKEPDKVEHVDATQGIPEDMMGLDH
GQASSQMFAGAICASKTIVWNGPPGLFENELFSKGTESMLEAVIGATNRG
ATTIVGGGDTATACLKFGGADKVSHVSTGGGASLELLEGKVLPGVAALSD
A*

FI08030.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:39:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG9961-PA 448 CG9961-PA 1..448 4..451 2289 100 Plus
Pgk-PE 415 CG3127-PE 5..415 40..451 1298 62.6 Plus
Pgk-PD 415 CG3127-PD 5..415 40..451 1298 62.6 Plus
Pgk-PC 415 CG3127-PC 5..415 40..451 1298 62.6 Plus
Pgk-PB 415 CG3127-PB 5..415 40..451 1298 62.6 Plus