Clone FI08042 Report

Search the DGRC for FI08042

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:80
Well:42
Vector:pOTB7
Associated Gene/TranscriptCG9129-RA
Protein status:FI08042.pep: gold
Sequenced Size:1106

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG9129 2008-08-15 Release 5.9 accounting
CG9129 2008-12-18 5.12 accounting

Clone Sequence Records

FI08042.complete Sequence

1106 bp assembled on 2008-07-15

GenBank Submission: BT044379.1

> FI08042.complete
CCATTTCGAAAATCAGTCTTTCCTTTTCGGCACGTCGTCAAAATCTGAAT
TCAAAATTCAACATATTTATTTTTCGTCAAAATTAGGTTTCAGTGACTGA
AAATTTCTAAAAACGTTTTCAACACATAACAAATTCTTTGGTGTAGTAAT
TTTGTCAAATTTCTAGTTTTTAAGCTTTTATATGAGAATGGACAAGTCGG
AGAAACGCTCTAATCTTGCTGATAACTTCCTGTATATGTTGGAGTTCATG
GTGGACGATCTGCTGATCACTCGTCCCAACCTCTGCGCTCCGGAGGAGTA
TCCCACTTGCACGGAGATCACGTTCCGTTCGGTTTTCCTGAACATTCGCG
ATCGGGAGAACGGAAGCTGTGTCAACCCCTGTTCGCCCAAGTGCGGCAAG
TGCACCCTCTTCACGCTGGAATCGCCGATCACGGACGAGGACGTGATGCA
CATTCACGTTTACAAGAAGCGCACGGAGAGCTGCAAGTTCCTGCTCGGGC
TGACCGAGCTGCCGATGAAGCCGATCTTCGACAGGGTAAAGAAGGAGTTC
TATTCACAGAACATAAACTGGGAGAGTAATGTCGAGTCCCATTTGTCGCG
AATGCCCAAGCTGAGGGGCCCCTGCAAGAAGGCCAATGACTGTGTGTGCT
ACGAGAGGAATAGGGAGCGGCGCGAACAGTGGTGTCCCACCTCAGAGCTG
ACCAAGCGGATGCTGCCGCTCTTCAACCTCTGCAAGATGCAGACGGGCAA
TATAGTGCTGATCCTGAGACTGGTGTGCAATGGGCCCTCTGTGGTATCCT
CCTTCCCCGTCCAGAGACCAGTGTGCAAGGATCCCTGCAACTGTTGCTGT
CCTTGCCCGCCCACTTGGCCTGCTCCCTGTTCGTCGCCATTCGATCCCTG
CGATCCTTGCAAGACCGTGCCAGCCAAGAAGACATGAGTAGGAAATGCAG
CTGCGAGCCTTTATATTCCGTACTCATTTAGTTGCCATAAGCGTTTTTAT
TGTTTGACAAGGGATGCGCCTATCAACTGATAATCATTCGCATATTTTAA
CTATAAATAAAGTATTTGAATAATTTTTATACCAAAAAAAAAAAAAAAAA
AAAAAA

FI08042.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:03:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG9129-RA 1087 CG9129-RA 1..1085 1..1085 5290 99.1 Plus
CG9130-RA 3038 CG9130-RA 237..557 224..541 725 82.2 Plus
CG9133-RC 3038 CG9133-RC 237..557 224..541 725 82.2 Plus
CG9130-RA 3038 CG9130-RA 695..805 673..783 360 88.2 Plus
CG9133-RC 3038 CG9133-RC 695..805 673..783 360 88.2 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 20:34:12
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 1250211..1251293 1..1083 5400 99.9 Plus
chr3L 24539361 chr3L 1251762..1252082 224..541 760 83.2 Plus
chr3L 24539361 chr3L 1252186..1252330 639..783 335 82.1 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:20:19 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 20:34:10
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 1250696..1251780 1..1085 5290 99.2 Plus
3L 28110227 3L 1252248..1252568 224..541 715 82.2 Plus
3L 28110227 3L 1252672..1252816 639..783 365 83.4 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:22:12
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 1250696..1251780 1..1085 5290 99.1 Plus
3L 28103327 3L 1252248..1252568 224..541 725 82.2 Plus
3L 28103327 3L 1252706..1252816 673..783 360 88.2 Plus
Blast to na_te.dros performed 2019-03-16 20:34:10
Subject Length Description Subject Range Query Range Score Percent Strand
S-element 1736 S-element DM33463 1736bp Derived from U33463 (g1006788) (Rel. 47, Last updated, Version 5). 101..209 44..154 126 60.7 Plus
S-element 1736 S-element DM33463 1736bp Derived from U33463 (g1006788) (Rel. 47, Last updated, Version 5). 1547..1636 135..44 112 62.4 Minus

FI08042.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 20:35:06 Download gff for FI08042.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 1250211..1251293 1..1083 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:57:45 Download gff for FI08042.complete
Subject Subject Range Query Range Percent Splice Strand
CG9129-RA 1..756 182..937 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:05:24 Download gff for FI08042.complete
Subject Subject Range Query Range Percent Splice Strand
CG9129-RA 1..756 182..937 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:11:02 Download gff for FI08042.complete
Subject Subject Range Query Range Percent Splice Strand
CG9129-RA 1..756 182..937 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:52:46 Download gff for FI08042.complete
Subject Subject Range Query Range Percent Splice Strand
CG9129-RA 1..756 182..937 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:07:12 Download gff for FI08042.complete
Subject Subject Range Query Range Percent Splice Strand
CG9129-RA 1..756 182..937 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:28:23 Download gff for FI08042.complete
Subject Subject Range Query Range Percent Splice Strand
CG9129-RA 1..1083 1..1083 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:05:24 Download gff for FI08042.complete
Subject Subject Range Query Range Percent Splice Strand
CG9129-RA 1..1083 1..1083 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:11:02 Download gff for FI08042.complete
Subject Subject Range Query Range Percent Splice Strand
CG9129-RA 1..1083 1..1083 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-22 00:52:46 Download gff for FI08042.complete
Subject Subject Range Query Range Percent Splice Strand
CG9129-RA 1..1083 1..1083 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:07:12 Download gff for FI08042.complete
Subject Subject Range Query Range Percent Splice Strand
CG9129-RA 1..1083 1..1083 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 20:35:06 Download gff for FI08042.complete
Subject Subject Range Query Range Percent Splice Strand
3L 1250696..1251778 1..1083 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 20:35:06 Download gff for FI08042.complete
Subject Subject Range Query Range Percent Splice Strand
3L 1250696..1251778 1..1083 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 20:35:06 Download gff for FI08042.complete
Subject Subject Range Query Range Percent Splice Strand
3L 1250696..1251778 1..1083 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:11:02 Download gff for FI08042.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 1250696..1251778 1..1083 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:34:02 Download gff for FI08042.complete
Subject Subject Range Query Range Percent Splice Strand
3L 1250696..1251778 1..1083 99   Plus

FI08042.pep Sequence

Translation from 181 to 936

> FI08042.pep
MRMDKSEKRSNLADNFLYMLEFMVDDLLITRPNLCAPEEYPTCTEITFRS
VFLNIRDRENGSCVNPCSPKCGKCTLFTLESPITDEDVMHIHVYKKRTES
CKFLLGLTELPMKPIFDRVKKEFYSQNINWESNVESHLSRMPKLRGPCKK
ANDCVCYERNRERREQWCPTSELTKRMLPLFNLCKMQTGNIVLILRLVCN
GPSVVSSFPVQRPVCKDPCNCCCPCPPTWPAPCSSPFDPCDPCKTVPAKK
T*

FI08042.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 17:59:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF24444-PA 495 GF24444-PA 8..227 2..218 753 65.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 17:59:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG14769-PA 242 GG14769-PA 1..240 3..249 1125 86.6 Plus
Dere\GG14770-PA 512 GG14770-PA 12..231 2..218 802 67.7 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 17:59:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH15443-PA 459 GH15443-PA 3..208 12..215 706 65 Plus
Dgri\GH16008-PA 222 GH16008-PA 4..192 13..208 485 50.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:18:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG9129-PA 251 CG9129-PA 1..251 1..251 1406 100 Plus
CG9130-PB 517 CG9130-PB 15..282 2..243 891 61.6 Plus
CG9130-PA 517 CG9130-PA 15..282 2..243 891 61.6 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 17:59:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI13043-PA 444 GI13043-PA 1..199 19..215 699 67.8 Plus
Dmoj\GI13044-PA 470 GI13044-PA 149..374 4..219 558 48.2 Plus
Dmoj\GI13044-PA 470 GI13044-PA 1..99 107..207 160 36.3 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 17:59:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL16166-PA 454 GL16166-PA 5..212 14..218 757 68.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 18:00:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA16831-PA 456 GA16831-PA 5..246 14..228 762 62.1 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 18:00:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM14389-PA 249 GM14389-PA 1..249 3..251 1125 94 Plus
Dsec\GM13185-PA 668 GM13185-PA 15..234 2..218 794 67.3 Plus
Dsec\GM14391-PA 519 GM14391-PA 15..234 2..218 793 67.3 Plus
Dsec\GM13184-PA 163 GM13184-PA 1..163 89..251 674 91.4 Plus
Dsec\GM13183-PA 56 GM13183-PA 1..56 3..58 215 73.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 18:00:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD13598-PA 249 GD13598-PA 1..249 3..251 1166 94 Plus
Dsim\GD13599-PA 519 GD13599-PA 15..234 2..218 792 67.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 18:00:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ12138-PA 474 GJ12138-PA 6..208 15..215 722 68.5 Plus
Dvir\GJ12139-PA 261 GJ12139-PA 6..220 15..219 582 51.6 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 18:00:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK21148-PA 443 GK21148-PA 1..203 12..212 720 64 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 18:00:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE21132-PA 242 GE21132-PA 1..242 3..251 1138 86.3 Plus
Dyak\GE21134-PA 518 GE21134-PA 12..231 2..218 798 67.3 Plus

FI08042.hyp Sequence

Translation from 181 to 936

> FI08042.hyp
MRMDKSEKRSNLADNFLYMLEFMVDDLLITRPNLCAPEEYPTCTEITFRS
VFLNIRDRENGSCVNPCSPKCGKCTLFTLESPITDEDVMHIHVYKKRTES
CKFLLGLTELPMKPIFDRVKKEFYSQNINWESNVESHLSRMPKLRGPCKK
ANDCVCYERNRERREQWCPTSELTKRMLPLFNLCKMQTGNIVLILRLVCN
GPSVVSSFPVQRPVCKDPCNCCCPCPPTWPAPCSSPFDPCDPCKTVPAKK
T*

FI08042.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:39:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG9129-PA 251 CG9129-PA 1..251 1..251 1406 100 Plus
CG9130-PB 517 CG9130-PB 15..282 2..243 891 61.6 Plus
CG9130-PA 517 CG9130-PA 15..282 2..243 891 61.6 Plus