FI08047.complete Sequence
738 bp assembled on 2008-07-25
GenBank Submission: BT044383.1
> FI08047.complete
GTCGGGCAGGCCCGCACCGAATCCAAAAAATCTTGAAATACAACATCTTG
GAAACACCGATTACAATTGGATTCAACCGAGAACGATGTCGCAACTGATG
GAGATGACCCGCCACGTGACCTCTTGGCTTGGCTGGACACCGACGCCCAC
ATGCGACGTCGCGGAGGAGGAGGAGCCGCTGCAGGAATCGTCCGGCATTG
TGACCGTACTGGTTCTCTACCTGGGCATGGCCGGCATCTTTGCGGCCCTG
AGTCTCTGCACCACGACCAGCGACGACCAGGTGCGGGCCCGGGCCAAGCG
GGAACTGATGGCCATGGAGCGCCGCCAGTTGCAGCGTCTGGAGCGGCAGG
GCAGGGCAACGGGGTTAACTCTGCTGCCAAACTGGACGACCGCCATGCCA
TCGCTTATTCGCGAAGTGGCTGCTCCTAGGCCTTCAGTCATTCAACTGGA
AGAGCAGCGCTTGCGGATGCGTCTGCTCCAGCTAACGGATCAGAAGGAGC
AGGAGGAGCACGATTCCCAGGATTGGCACGATGCTGTGGATGCGCCAGAG
GAGGAGCAGGCCACCAGTTGCCTCGCCCCCAAGAGCCAAAATTCCACTTT
CTTTGACCTTCCCTTAGACTCCGAATGAATCTCATTCACCCGAGGAACTA
TTCTAAATCATAGCGTAACACACTCAAACCTGCAGCATGAGTTCACAAAT
AAACAAGTACCCACATATTATTAAAAAAAAAAAAAAAA
FI08047.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 21:02:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2533-RA | 878 | CG2533-RA | 97..819 | 1..723 | 3615 | 100 | Plus |
CG2533.a | 723 | CG2533.a | 67..722 | 68..723 | 3280 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-15 20:56:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chrX | 22417052 | chrX | 11494442..11495094 | 722..70 | 3265 | 100 | Minus |
chrX | 22417052 | chrX | 11495274..11495343 | 70..1 | 350 | 100 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:20:23 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 20:56:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 11603242..11603895 | 723..70 | 3270 | 100 | Minus |
X | 23542271 | X | 11604075..11604144 | 70..1 | 350 | 100 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:20:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23527363 | X | 11611340..11611993 | 723..70 | 3270 | 100 | Minus |
X | 23527363 | X | 11612173..11612242 | 70..1 | 350 | 100 | Minus |
Blast to na_te.dros performed on 2019-03-15 20:56:35 has no hits.
FI08047.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 20:57:51 Download gff for
FI08047.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chrX | 11494442..11495093 | 71..722 | 100 | <- | Minus |
chrX | 11495274..11495343 | 1..70 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:57:54 Download gff for
FI08047.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2533-RA | 1..543 | 86..628 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:03:04 Download gff for
FI08047.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2533-RA | 1..543 | 86..628 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 05:31:57 Download gff for
FI08047.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2533-RA | 1..543 | 86..628 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-09-08 12:18:04 Download gff for
FI08047.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2533-RA | 1..543 | 86..628 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:38:10 Download gff for
FI08047.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2533-RA | 1..543 | 86..628 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:22:31 Download gff for
FI08047.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2533-RA | 51..772 | 1..722 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:03:04 Download gff for
FI08047.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2533-RA | 51..772 | 1..722 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:31:57 Download gff for
FI08047.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2533-RA | 51..772 | 1..722 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-25 13:46:04 Download gff for
FI08047.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2533-RA | 51..772 | 1..722 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:38:10 Download gff for
FI08047.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG2533-RA | 51..772 | 1..722 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:57:51 Download gff for
FI08047.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 11603243..11603894 | 71..722 | 100 | <- | Minus |
X | 11604075..11604144 | 1..70 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:57:51 Download gff for
FI08047.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 11603243..11603894 | 71..722 | 100 | <- | Minus |
X | 11604075..11604144 | 1..70 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:57:51 Download gff for
FI08047.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 11603243..11603894 | 71..722 | 100 | <- | Minus |
X | 11604075..11604144 | 1..70 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:31:57 Download gff for
FI08047.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 11497276..11497927 | 71..722 | 100 | <- | Minus |
arm_X | 11498108..11498177 | 1..70 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:31:01 Download gff for
FI08047.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 11611341..11611992 | 71..722 | 100 | <- | Minus |
X | 11612173..11612242 | 1..70 | 100 | | Minus |
FI08047.hyp Sequence
Translation from 1 to 627
> FI08047.hyp
SGRPAPNPKNLEIQHLGNTDYNWIQPRTMSQLMEMTRHVTSWLGWTPTPT
CDVAEEEEPLQESSGIVTVLVLYLGMAGIFAALSLCTTTSDDQVRARAKR
ELMAMERRQLQRLERQGRATGLTLLPNWTTAMPSLIREVAAPRPSVIQLE
EQRLRMRLLQLTDQKEQEEHDSQDWHDAVDAPEEEQATSCLAPKSQNSTF
FDLPLDSE*
FI08047.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:39:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2533-PA | 180 | CG2533-PA | 1..180 | 29..208 | 924 | 100 | Plus |
FI08047.pep Sequence
Translation from 1 to 627
> FI08047.pep
SGRPAPNPKNLEIQHLGNTDYNWIQPRTMSQLMEMTRHVTSWLGWTPTPT
CDVAEEEEPLQESSGIVTVLVLYLGMAGIFAALSLCTTTSDDQVRARAKR
ELMAMERRQLQRLERQGRATGLTLLPNWTTAMPSLIREVAAPRPSVIQLE
EQRLRMRLLQLTDQKEQEEHDSQDWHDAVDAPEEEQATSCLAPKSQNSTF
FDLPLDSE*
FI08047.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 18:06:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF20983-PA | 240 | GF20983-PA | 1..240 | 29..208 | 281 | 34.3 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 18:06:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG18846-PA | 180 | GG18846-PA | 1..180 | 29..208 | 446 | 68.4 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:24:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG2533-PA | 180 | CG2533-PA | 1..180 | 29..208 | 924 | 100 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 18:06:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM13061-PA | 182 | GM13061-PA | 1..182 | 29..208 | 784 | 86.3 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 18:06:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE17288-PA | 181 | GE17288-PA | 1..181 | 29..208 | 677 | 76.1 | Plus |