Clone FI08047 Report

Search the DGRC for FI08047

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:80
Well:47
Vector:pOTB7
Associated Gene/TranscriptCG2533-RA
Protein status:FI08047.pep: gold
Sequenced Size:738

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG2533 2008-08-15 Release 5.9 accounting
CG2533 2008-12-18 5.12 accounting

Clone Sequence Records

FI08047.complete Sequence

738 bp assembled on 2008-07-25

GenBank Submission: BT044383.1

> FI08047.complete
GTCGGGCAGGCCCGCACCGAATCCAAAAAATCTTGAAATACAACATCTTG
GAAACACCGATTACAATTGGATTCAACCGAGAACGATGTCGCAACTGATG
GAGATGACCCGCCACGTGACCTCTTGGCTTGGCTGGACACCGACGCCCAC
ATGCGACGTCGCGGAGGAGGAGGAGCCGCTGCAGGAATCGTCCGGCATTG
TGACCGTACTGGTTCTCTACCTGGGCATGGCCGGCATCTTTGCGGCCCTG
AGTCTCTGCACCACGACCAGCGACGACCAGGTGCGGGCCCGGGCCAAGCG
GGAACTGATGGCCATGGAGCGCCGCCAGTTGCAGCGTCTGGAGCGGCAGG
GCAGGGCAACGGGGTTAACTCTGCTGCCAAACTGGACGACCGCCATGCCA
TCGCTTATTCGCGAAGTGGCTGCTCCTAGGCCTTCAGTCATTCAACTGGA
AGAGCAGCGCTTGCGGATGCGTCTGCTCCAGCTAACGGATCAGAAGGAGC
AGGAGGAGCACGATTCCCAGGATTGGCACGATGCTGTGGATGCGCCAGAG
GAGGAGCAGGCCACCAGTTGCCTCGCCCCCAAGAGCCAAAATTCCACTTT
CTTTGACCTTCCCTTAGACTCCGAATGAATCTCATTCACCCGAGGAACTA
TTCTAAATCATAGCGTAACACACTCAAACCTGCAGCATGAGTTCACAAAT
AAACAAGTACCCACATATTATTAAAAAAAAAAAAAAAA

FI08047.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:02:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG2533-RA 878 CG2533-RA 97..819 1..723 3615 100 Plus
CG2533.a 723 CG2533.a 67..722 68..723 3280 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 20:56:36
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 11494442..11495094 722..70 3265 100 Minus
chrX 22417052 chrX 11495274..11495343 70..1 350 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:20:23 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 20:56:34
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 11603242..11603895 723..70 3270 100 Minus
X 23542271 X 11604075..11604144 70..1 350 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:20:51
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 11611340..11611993 723..70 3270 100 Minus
X 23527363 X 11612173..11612242 70..1 350 100 Minus
Blast to na_te.dros performed on 2019-03-15 20:56:35 has no hits.

FI08047.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 20:57:51 Download gff for FI08047.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 11494442..11495093 71..722 100 <- Minus
chrX 11495274..11495343 1..70 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:57:54 Download gff for FI08047.complete
Subject Subject Range Query Range Percent Splice Strand
CG2533-RA 1..543 86..628 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:03:04 Download gff for FI08047.complete
Subject Subject Range Query Range Percent Splice Strand
CG2533-RA 1..543 86..628 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 05:31:57 Download gff for FI08047.complete
Subject Subject Range Query Range Percent Splice Strand
CG2533-RA 1..543 86..628 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-09-08 12:18:04 Download gff for FI08047.complete
Subject Subject Range Query Range Percent Splice Strand
CG2533-RA 1..543 86..628 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:38:10 Download gff for FI08047.complete
Subject Subject Range Query Range Percent Splice Strand
CG2533-RA 1..543 86..628 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:22:31 Download gff for FI08047.complete
Subject Subject Range Query Range Percent Splice Strand
CG2533-RA 51..772 1..722 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:03:04 Download gff for FI08047.complete
Subject Subject Range Query Range Percent Splice Strand
CG2533-RA 51..772 1..722 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:31:57 Download gff for FI08047.complete
Subject Subject Range Query Range Percent Splice Strand
CG2533-RA 51..772 1..722 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-25 13:46:04 Download gff for FI08047.complete
Subject Subject Range Query Range Percent Splice Strand
CG2533-RA 51..772 1..722 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:38:10 Download gff for FI08047.complete
Subject Subject Range Query Range Percent Splice Strand
CG2533-RA 51..772 1..722 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:57:51 Download gff for FI08047.complete
Subject Subject Range Query Range Percent Splice Strand
X 11603243..11603894 71..722 100 <- Minus
X 11604075..11604144 1..70 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:57:51 Download gff for FI08047.complete
Subject Subject Range Query Range Percent Splice Strand
X 11603243..11603894 71..722 100 <- Minus
X 11604075..11604144 1..70 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:57:51 Download gff for FI08047.complete
Subject Subject Range Query Range Percent Splice Strand
X 11603243..11603894 71..722 100 <- Minus
X 11604075..11604144 1..70 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:31:57 Download gff for FI08047.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 11497276..11497927 71..722 100 <- Minus
arm_X 11498108..11498177 1..70 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:31:01 Download gff for FI08047.complete
Subject Subject Range Query Range Percent Splice Strand
X 11611341..11611992 71..722 100 <- Minus
X 11612173..11612242 1..70 100   Minus

FI08047.hyp Sequence

Translation from 1 to 627

> FI08047.hyp
SGRPAPNPKNLEIQHLGNTDYNWIQPRTMSQLMEMTRHVTSWLGWTPTPT
CDVAEEEEPLQESSGIVTVLVLYLGMAGIFAALSLCTTTSDDQVRARAKR
ELMAMERRQLQRLERQGRATGLTLLPNWTTAMPSLIREVAAPRPSVIQLE
EQRLRMRLLQLTDQKEQEEHDSQDWHDAVDAPEEEQATSCLAPKSQNSTF
FDLPLDSE*

FI08047.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:39:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG2533-PA 180 CG2533-PA 1..180 29..208 924 100 Plus

FI08047.pep Sequence

Translation from 1 to 627

> FI08047.pep
SGRPAPNPKNLEIQHLGNTDYNWIQPRTMSQLMEMTRHVTSWLGWTPTPT
CDVAEEEEPLQESSGIVTVLVLYLGMAGIFAALSLCTTTSDDQVRARAKR
ELMAMERRQLQRLERQGRATGLTLLPNWTTAMPSLIREVAAPRPSVIQLE
EQRLRMRLLQLTDQKEQEEHDSQDWHDAVDAPEEEQATSCLAPKSQNSTF
FDLPLDSE*

FI08047.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 18:06:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF20983-PA 240 GF20983-PA 1..240 29..208 281 34.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 18:06:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG18846-PA 180 GG18846-PA 1..180 29..208 446 68.4 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:24:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG2533-PA 180 CG2533-PA 1..180 29..208 924 100 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 18:06:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM13061-PA 182 GM13061-PA 1..182 29..208 784 86.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 18:06:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE17288-PA 181 GE17288-PA 1..181 29..208 677 76.1 Plus