Clone FI08052 Report

Search the DGRC for FI08052

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:80
Well:52
Vector:pOTB7
Associated Gene/Transcriptttm3-RA
Protein status:FI08052.pep: gold
Sequenced Size:1085

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
ttm3 2008-12-18 5.12 accounting

Clone Sequence Records

FI08052.complete Sequence

1085 bp assembled on 2008-08-25

GenBank Submission: BT044384.1

> FI08052.complete
ATAACGTCTAGCTCAAATGCATAAAATTGTTTGGTTTGGAACTTTAAATA
AGTCGATTGGCTACATCGGGAAAAAGAAGACCTGTCTTCTGAGTCCATGC
GAGAAAATATGCCTGAATTCAGCTAGAAAAACAGTACAGAGATGCGACAA
AAACTATTCACCACCAAAGTTAAGAAGAATCAAGAATTTCTATACCTACA
GTGTTGTATTGGGGAGTCTCTTCAGTATAGTCATGTGGGCCATCTATAAG
CTGGGCAAGCCCGAGGAAGACCATCGGGGTCCCATAGAAGATGAGTTCAG
TCAGCTTCCCTGGTTCCGCCAGTACATAATGAGGATGTGGCACACACTTC
AGTATTATGAAAAAATGATGGAAGAGCCCCAGATGGCAAGGCTGCTGCCA
AATGTTGTCCCACCGCCGTATATACAACCTCCCTATTCACTGGTGCTGGA
AATCAAAGACGTACTGGTGCATCCAGATTGGACTTATCAGACGGGGTGGC
GGTTTAAAAAGCGGCCTGGTGTGGATTACTTTCTTCAGCAGTGCAGTCGA
AATTTTGAAATTGTAATATATACTTCTGAACAAGGTATGACCGCATTCCC
CCTTCTGGATGCTTTAGATCCCTATGGCTACATAAAATATCGGCTAGTAA
GAGGTGCCACGGACTTGGTAGAGGGTCAGCATACCAAGAACCTCGATTAT
CTTAACAGGGATCTGAGCCGTGTGATAGTGGTGGACTGTGATCCGTATAC
CACTCCCCTGCATCCCGATAATAGCTTGGTGCTCACAAAGTGGCTGGGTA
ACGATGATGATGTCCAGCTCTTTGATCTCACGGCTTTCCTGCAGTTGATT
GCCGAACACCAAGTAAATGATGTAAGGGAGGTGCTGCGATACTATCGCCA
ATTCGAGGACCCCATGGAACAGTTTAAGGACAACCAACGTCGACTGCAGG
AGCAGAGTCAGGAAAGCATTCAGAATTTACCAACTAGTGAACGTCAGTGG
AACTTAACTTTATTGGGACGCTCCCTTCGAGGGTCTTCAATCAAATAAAT
TTTCGTTTATGCACCTTAAAAAAAAAAAAAAAAAA

FI08052.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:07:43
Subject Length Description Subject Range Query Range Score Percent Strand
ttm3-RA 1071 ttm3-RA 1..1068 1..1068 5295 99.7 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 15:27:38
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 22078232..22079298 1..1067 5290 99.7 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:20:25 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 15:27:36
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 22079672..22080739 1..1068 5295 99.7 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:25:53
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 22079672..22080739 1..1068 5295 99.7 Plus
Blast to na_te.dros performed on 2019-03-16 15:27:36 has no hits.

FI08052.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 15:28:36 Download gff for FI08052.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 22078232..22079298 1..1067 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:57:56 Download gff for FI08052.complete
Subject Subject Range Query Range Percent Splice Strand
ttm3-RA 1..1032 17..1048 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:11:15 Download gff for FI08052.complete
Subject Subject Range Query Range Percent Splice Strand
ttm3-RA 1..1032 17..1048 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 16:11:11 Download gff for FI08052.complete
Subject Subject Range Query Range Percent Splice Strand
ttm3-RA 1..1032 17..1048 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-09-08 12:19:45 Download gff for FI08052.complete
Subject Subject Range Query Range Percent Splice Strand
ttm3-RA 1..1032 17..1048 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 11:42:28 Download gff for FI08052.complete
Subject Subject Range Query Range Percent Splice Strand
ttm3-RA 1..1032 17..1048 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:08:15 Download gff for FI08052.complete
Subject Subject Range Query Range Percent Splice Strand
ttm3-RA 1..1067 1..1067 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:11:15 Download gff for FI08052.complete
Subject Subject Range Query Range Percent Splice Strand
ttm3-RA 1..1067 1..1067 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:11:11 Download gff for FI08052.complete
Subject Subject Range Query Range Percent Splice Strand
ttm3-RA 41..1107 1..1067 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-25 10:59:15 Download gff for FI08052.complete
Subject Subject Range Query Range Percent Splice Strand
ttm3-RA 1..1067 1..1067 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:42:28 Download gff for FI08052.complete
Subject Subject Range Query Range Percent Splice Strand
ttm3-RA 41..1107 1..1067 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 15:28:36 Download gff for FI08052.complete
Subject Subject Range Query Range Percent Splice Strand
2L 22079672..22080738 1..1067 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 15:28:36 Download gff for FI08052.complete
Subject Subject Range Query Range Percent Splice Strand
2L 22079672..22080738 1..1067 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 15:28:36 Download gff for FI08052.complete
Subject Subject Range Query Range Percent Splice Strand
2L 22079672..22080738 1..1067 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:11:11 Download gff for FI08052.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 22079672..22080738 1..1067 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:41:29 Download gff for FI08052.complete
Subject Subject Range Query Range Percent Splice Strand
2L 22079672..22080738 1..1067 99   Plus

FI08052.pep Sequence

Translation from 16 to 1047

> FI08052.pep
MHKIVWFGTLNKSIGYIGKKKTCLLSPCEKICLNSARKTVQRCDKNYSPP
KLRRIKNFYTYSVVLGSLFSIVMWAIYKLGKPEEDHRGPIEDEFSQLPWF
RQYIMRMWHTLQYYEKMMEEPQMARLLPNVVPPPYIQPPYSLVLEIKDVL
VHPDWTYQTGWRFKKRPGVDYFLQQCSRNFEIVIYTSEQGMTAFPLLDAL
DPYGYIKYRLVRGATDLVEGQHTKNLDYLNRDLSRVIVVDCDPYTTPLHP
DNSLVLTKWLGNDDDVQLFDLTAFLQLIAEHQVNDVREVLRYYRQFEDPM
EQFKDNQRRLQEQSQESIQNLPTSERQWNLTLLGRSLRGSSIK*

FI08052.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 12:25:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF23743-PA 336 GF23743-PA 10..336 4..340 1292 71.8 Plus
Dana\GF22482-PA 411 GF22482-PA 145..411 74..335 900 61 Plus
Dana\GF25046-PA 427 GF25046-PA 160..403 73..315 821 59.8 Plus
Dana\GF10364-PA 329 GF10364-PA 130..253 165..290 185 32.5 Plus
Dana\GF21841-PA 218 GF21841-PA 84..208 165..290 147 30.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 12:25:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG21359-PA 305 GG21359-PA 1..305 1..314 1479 86.9 Plus
Dere\GG18609-PA 422 GG18609-PA 143..422 61..335 904 58.6 Plus
Dere\GG14712-PA 411 GG14712-PA 126..385 53..313 783 53.8 Plus
Dere\GG13507-PA 324 GG13507-PA 130..278 165..319 187 31.6 Plus
Dere\GG10624-PA 294 GG10624-PA 126..286 133..298 161 30.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 12:25:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH10458-PA 576 GH10458-PA 309..566 59..316 932 67.2 Plus
Dgri\GH17760-PA 407 GH17760-PA 139..407 72..335 916 62.1 Plus
Dgri\GH15740-PA 410 GH15740-PA 126..387 53..315 796 53.8 Plus
Dgri\GH16757-PA 341 GH16757-PA 128..251 165..290 185 32.5 Plus
Dgri\GH12888-PA 243 GH12888-PA 109..233 165..290 154 31.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:51:24
Subject Length Description Subject Range Query Range Score Percent Strand
ttm3-PA 343 CG6691-PA 1..343 1..343 1849 100 Plus
ttm50-PB 428 CG2713-PB 149..428 61..335 911 59.3 Plus
ttm50-PA 428 CG2713-PA 149..428 61..335 911 59.3 Plus
ttm2-PA 409 CG12313-PA 124..382 53..312 771 54.4 Plus
CG5830-PA 329 CG5830-PA 130..294 165..331 197 28.1 Plus
CG5830-PB 352 CG5830-PB 153..317 165..331 197 28.1 Plus
CG8584-PA 293 CG8584-PA 126..275 133..290 158 30.8 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 12:25:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI17713-PA 359 GI17713-PA 63..347 34..316 1028 64.6 Plus
Dmoj\GI15094-PA 409 GI15094-PA 141..409 72..335 906 61 Plus
Dmoj\GI12797-PA 411 GI12797-PA 144..387 73..315 821 59.8 Plus
Dmoj\GI13418-PA 331 GI13418-PA 128..251 165..290 186 32.5 Plus
Dmoj\GI20773-PA 313 GI20773-PA 177..302 165..291 155 33.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 12:25:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL25662-PA 349 GL25662-PA 45..343 38..335 1058 63.2 Plus
Dper\GL19807-PA 310 GL19807-PA 31..310 61..335 870 57.9 Plus
Dper\GL16126-PA 367 GL16126-PA 95..341 53..313 745 54.2 Plus
Dper\GL12819-PA 333 GL12819-PA 130..253 165..290 185 32.5 Plus
Dper\GL19342-PA 274 GL19342-PA 126..251 165..291 152 34.4 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 12:25:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA25377-PA 349 GA25377-PA 45..343 38..335 1056 63.2 Plus
Dpse\GA15443-PA 390 GA15443-PA 111..390 61..335 873 57.9 Plus
Dpse\GA11549-PA 388 GA11549-PA 103..362 53..313 816 56.9 Plus
Dpse\GA19163-PA 335 GA19163-PA 130..253 165..290 185 32.5 Plus
Dpse\GA25924-PA 306 GA25924-PA 158..283 165..291 155 34.4 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 12:25:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM16156-PA 343 GM16156-PA 1..343 1..343 1790 96.2 Plus
Dsec\GM14328-PA 401 GM14328-PA 115..374 52..312 752 53.4 Plus
Dsec\GM24453-PA 412 GM24453-PA 211..334 165..290 184 32.5 Plus
Dsec\GM18857-PA 149 GM18857-PA 87..149 277..335 150 50.8 Plus
Dsec\GM22628-PA 243 GM22628-PA 109..233 165..290 148 30.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 12:25:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD24345-PA 343 GD24345-PA 1..343 1..343 1784 95.9 Plus
Dsim\GD16356-PA 428 GD16356-PA 149..428 61..335 911 58.9 Plus
Dsim\GD11008-PA 402 GD11008-PA 116..375 52..312 750 53.1 Plus
Dsim\GD12523-PA 331 GD12523-PA 130..253 165..290 185 32.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 12:25:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ11495-PA 354 GJ11495-PA 37..352 24..325 933 58.9 Plus
Dvir\GJ18901-PA 413 GJ18901-PA 145..413 72..335 916 61.1 Plus
Dvir\GJ16096-PA 411 GJ16096-PA 144..387 73..315 817 59 Plus
Dvir\GJ11778-PA 329 GJ11778-PA 127..250 165..290 185 32.5 Plus
Dvir\GJ18780-PA 243 GJ18780-PA 109..233 165..290 150 30.7 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 12:25:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK18701-PA 375 GK18701-PA 84..371 52..334 1010 65.1 Plus
Dwil\GK25521-PA 407 GK25521-PA 137..407 70..335 890 59.8 Plus
Dwil\GK14784-PA 400 GK14784-PA 126..377 66..317 852 61.7 Plus
Dwil\GK16545-PA 315 GK16545-PA 66..311 67..298 535 43.4 Plus
Dwil\GK23622-PA 325 GK23622-PA 131..254 165..290 186 32.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 12:25:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE12974-PA 320 GE12974-PA 1..320 1..327 1513 85 Plus
Dyak\GE16923-PA 424 GE16923-PA 145..424 61..335 909 58.6 Plus
Dyak\GE21075-PA 409 GE21075-PA 142..383 73..313 788 57.4 Plus
Dyak\GE23126-PA 325 GE23126-PA 130..278 165..319 186 31.6 Plus
Dyak\GE15304-PA 243 GE15304-PA 109..233 165..290 148 30.7 Plus

FI08052.hyp Sequence

Translation from 16 to 1047

> FI08052.hyp
MHKIVWFGTLNKSIGYIGKKKTCLLSPCEKICLNSARKTVQRCDKNYSPP
KLRRIKNFYTYSVVLGSLFSIVMWAIYKLGKPEEDHRGPIEDEFSQLPWF
RQYIMRMWHTLQYYEKMMEEPQMARLLPNVVPPPYIQPPYSLVLEIKDVL
VHPDWTYQTGWRFKKRPGVDYFLQQCSRNFEIVIYTSEQGMTAFPLLDAL
DPYGYIKYRLVRGATDLVEGQHTKNLDYLNRDLSRVIVVDCDPYTTPLHP
DNSLVLTKWLGNDDDVQLFDLTAFLQLIAEHQVNDVREVLRYYRQFEDPM
EQFKDNQRRLQEQSQESIQNLPTSERQWNLTLLGRSLRGSSIK*

FI08052.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:39:59
Subject Length Description Subject Range Query Range Score Percent Strand
ttm3-PA 343 CG6691-PA 1..343 1..343 1849 100 Plus
ttm50-PB 428 CG2713-PB 149..428 61..335 911 59.3 Plus
ttm50-PA 428 CG2713-PA 149..428 61..335 911 59.3 Plus
ttm2-PA 409 CG12313-PA 124..382 53..312 771 54.4 Plus
CG5830-PA 329 CG5830-PA 130..294 165..331 197 28.1 Plus