Clone FI08056 Report

Search the DGRC for FI08056

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:80
Well:56
Vector:pOTB7
Associated Gene/TranscriptCG12307-RA
Protein status:FI08056.pep: gold
Sequenced Size:723

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG12307 2008-12-18 5.12 accounting

Clone Sequence Records

FI08056.complete Sequence

723 bp assembled on 2008-08-25

GenBank Submission: BT044386.1

> FI08056.complete
CAACTTTTAGGAGTGCGGTTGCTGAAATTCGAATTAGAAAATTCTAAAAA
AAAAAAGAGACACCATTACAATGAAAAACTCAACTGTGCAAGACAGTTCA
CCGCAAGTGCCACAGAATGGCATGGTCACCTATGGCAGCGGGCTCGTCTT
TGGCGGGAAAGTTTATCCGGTATTGGTGGACGGAAAGCCAATACAGCCAC
CCTTAGGTGCTCATCAGGCAGCAATGCAACAGCGCATGCAGATGCAGCAG
GTTCAGCCACAGGCGCCACATACCAACTGCCCCAAGTCCATTGTCCAACA
ACCTATATATCAACGAATGGAGACCCGGTATCCTGCGCCCTCATACATGT
CCAAGCCAAGCCAACAGAGCTCTGTGAGTTGTCCTGGCCCAGTCATGGTG
CAGCAGCACTCGCCGTCTAACAATCTGGCGATGATGCAACCGTTGCAGGC
GCAGATTTTACAGCGCCAGCAAATGCAAACCTCCATGGGCAGTCCTTGCG
GCTACTACAACCTGCCAACGAATGCGGGTGGTGATTCCTGCGGCTGGGAC
GGCTATGCCATGATGCAGCCAATGGATGCCAACAAGCCGTATACCTTTGG
CTGGAGTCTTACCGATTGAGTCCTTTATCCTCTGTAAAAGTGTTTGGACA
ATTAATGAAATTAAATGTGGATTGATTTAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAA

FI08056.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:07:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG12307-RA 680 CG12307-RA 1..638 1..637 3120 99.5 Plus
CG12307.a 605 CG12307.a 1..375 1..374 1820 99.4 Plus
CG12307.a 605 CG12307.a 375..563 449..637 945 100 Plus
CG12307-RA 680 CG12307-RA 650..680 648..678 155 100 Plus
CG12307.a 605 CG12307.a 575..605 648..678 155 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 00:48:10
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 11650057..11650735 678..1 3240 98.8 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:20:27 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 00:48:08
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 11651330..11652010 679..1 3185 98.5 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:26:03
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 11651373..11652010 637..1 3120 99.5 Minus
2L 23513712 2L 11651330..11651361 679..648 160 100 Minus
Blast to na_te.dros performed on 2019-03-16 00:48:09 has no hits.

FI08056.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 00:49:27 Download gff for FI08056.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 11650057..11650735 1..678 98   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:57:59 Download gff for FI08056.complete
Subject Subject Range Query Range Percent Splice Strand
CG12307-RA 1..549 71..619 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:11:32 Download gff for FI08056.complete
Subject Subject Range Query Range Percent Splice Strand
CG12307-RA 1..549 71..619 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:37:40 Download gff for FI08056.complete
Subject Subject Range Query Range Percent Splice Strand
CG12307-RA 1..549 71..619 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-09-08 12:19:50 Download gff for FI08056.complete
Subject Subject Range Query Range Percent Splice Strand
CG12307-RA 1..549 71..619 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 04:13:09 Download gff for FI08056.complete
Subject Subject Range Query Range Percent Splice Strand
CG12307-RA 1..549 71..619 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:08:45 Download gff for FI08056.complete
Subject Subject Range Query Range Percent Splice Strand
CG12307-RA 1..611 10..619 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:11:31 Download gff for FI08056.complete
Subject Subject Range Query Range Percent Splice Strand
CG12307-RA 1..680 1..678 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:37:40 Download gff for FI08056.complete
Subject Subject Range Query Range Percent Splice Strand
CG12307-RA 1..680 1..678 98   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-28 18:05:28 Download gff for FI08056.complete
Subject Subject Range Query Range Percent Splice Strand
CG12307-RA 1..611 10..619 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 04:13:09 Download gff for FI08056.complete
Subject Subject Range Query Range Percent Splice Strand
CG12307-RA 1..680 1..678 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 00:49:27 Download gff for FI08056.complete
Subject Subject Range Query Range Percent Splice Strand
2L 11651331..11652010 1..678 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 00:49:27 Download gff for FI08056.complete
Subject Subject Range Query Range Percent Splice Strand
2L 11651331..11652010 1..678 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 00:49:27 Download gff for FI08056.complete
Subject Subject Range Query Range Percent Splice Strand
2L 11651331..11652010 1..678 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:37:40 Download gff for FI08056.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 11651331..11652010 1..678 98   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:41:48 Download gff for FI08056.complete
Subject Subject Range Query Range Percent Splice Strand
2L 11651331..11652010 1..678 98   Minus

FI08056.pep Sequence

Translation from 70 to 618

> FI08056.pep
MKNSTVQDSSPQVPQNGMVTYGSGLVFGGKVYPVLVDGKPIQPPLGAHQA
AMQQRMQMQQVQPQAPHTNCPKSIVQQPIYQRMETRYPAPSYMSKPSQQS
SVSCPGPVMVQQHSPSNNLAMMQPLQAQILQRQQMQTSMGSPCGYYNLPT
NAGGDSCGWDGYAMMQPMDANKPYTFGWSLTD*

FI08056.pep Blast Records

Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 12:23:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG10301-PA 189 GG10301-PA 4..189 1..182 759 80.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:02:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG12307-PA 182 CG12307-PA 1..182 1..182 987 100 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 12:23:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL18814-PA 239 GL18814-PA 24..71 11..58 140 68.8 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 12:23:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA25811-PA 246 GA25811-PA 27..65 11..49 144 69.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 12:23:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM11012-PA 188 GM11012-PA 4..188 1..182 746 88.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 12:23:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD22161-PA 188 GD22161-PA 4..188 1..182 768 90.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 12:23:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE12741-PA 185 GE12741-PA 4..185 1..182 734 80.9 Plus

FI08056.hyp Sequence

Translation from 70 to 618

> FI08056.hyp
MKNSTVQDSSPQVPQNGMVTYGSGLVFGGKVYPVLVDGKPIQPPLGAHQA
AMQQRMQMQQVQPQAPHTNCPKSIVQQPIYQRMETRYPAPSYMSKPSQQS
SVSCPGPVMVQQHSPSNNLAMMQPLQAQILQRQQMQTSMGSPCGYYNLPT
NAGGDSCGWDGYAMMQPMDANKPYTFGWSLTD*

FI08056.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:40:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG12307-PA 182 CG12307-PA 1..182 1..182 987 100 Plus