Associations are from manual ordering of a clone or by a periodic analysis.
Clone Sequence Records
FI08254.complete Sequence
1341 bp assembled on 2008-08-25
GenBank Submission: BT044395.1
> FI08254.complete
AAAATATTTGTGTATACAGTTGTGGGGGCAATTTGTGTCACTTGCATACT
TAGCAGATACATTCCTAGGATTCATCTTTAAAACAATGCTAAGATGCCCG
AAAGTGACCCAGTCGATGCTGGCCAGGATCAGCGTCCGCCACTTCGCAGA
CGAGATCCACGGCAGTGTGCGAGCGGCCTACGCAAAAGGAGACGCTCGAG
CTGATCCGGTCAATGTGCTGCCCAAGTCCAAATACGGTGGAATCAATACG
GTCTCTCTGGTCACGGGCACCACCATCATTGGCCAGCAGGGAGCCCAATT
CGTGTCATCCCTGCTTTCGAGCAGCCGCGTCCCTGTGGAGGTCCAAGTCA
TCGAAGCTGGCCAAGATGACGAGTACTTCCACTCGGTGCTCCGGAACAGA
ACCGCCGTTCATGTGGACAATCAGGCGGACGCGGAAGCCAAGCAGAAGGC
GCTCAAGATCTGCAATGATCTGGACTTGTACGTCTTCAAGACCCGGACAC
GCAGCTTTCCCGGCTTCAAGTGCCGCTTTCCGGGCGTGGACATCCAGTTA
ATCGGTCAGAACAACATGGGTATCTTCAACGAACTGGAATATTCACCCGT
GGAGGGAGTGGTGGAGGCCCTGTCCGTCGTCTCCCAAAAAGGCAATGACA
AGTATCTGCGGTACGCCTTTAAGGCGGCTGCAAAGGCGGGCCGGAAACGG
GTGACGCTGATCAACAAGGCCAAGGAGTGGCCCATTAGCGATGGCTCACT
GGTGGAAGCCGCCCAGCGCTTGCACTGCCACTACAAGGATTGCCTGGAGC
TGGAGCTCATGGAGGTGGAGGAGGCCATCAGCCGGCTGATGACGGAGCCC
ACCTACTTCGATTGCCTCTTCGCCAGCGAACGCTATGCCACGTTCCTATC
CGCCATATGCAGTGGAGTCTGTGGCGGGGCTAATCTCTTCAGTGCGGTGG
AGATCGGAGATCACCATGCCGTTTTCAAACCGCTCCAGACGAAACTATCG
CTGACCAACTATGCCAATCTAAGTGCCTACGGCATCGTGTCCACCATTGT
GGATCTCTTCCAGCATCTGGGCCATGATAAGTGCGCCGATGCTCTGTGGT
GCGAATTGAAGCGCACCATGGACGAGGGCATTCGCACCAAGGAGTTCGGT
GGCCAGGACACCGGCGAGTATGTCATTTGCAACATCATCAACCAGCTGCG
ATGCCGAGCATTGGGTAAATAAAGATCCTGCCATAAAATATATGATATTG
GGAAAAAAAAAAACTCTCATTAAATTGTCTGTGACCATTATTTTTCCAAA
ATAAAAACCAACTATTTTTAAACAAAAAAAAAAAAAAAAAA
FI08254.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 21:07:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7755-RA | 1320 | CG7755-RA | 1..1318 | 1..1320 | 6305 | 98.6 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-15 18:39:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr2R | 21145070 | chr2R | 12168982..12170299 | 1320..1 | 6295 | 98.6 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:20:41 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 18:39:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 16281629..16282946 | 1320..1 | 6295 | 98.6 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:25:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25260384 | 2R | 16282828..16284145 | 1320..1 | 6305 | 98.6 | Minus |
Blast to na_te.dros performed on 2019-03-15 18:39:55 has no hits.
FI08254.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 18:40:36 Download gff for
FI08254.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr2R | 12168979..12170299 | 1..1323 | 98 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:58:22 Download gff for
FI08254.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7755-RA | 1..1137 | 86..1222 | 98 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:11:16 Download gff for
FI08254.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7755-RA | 1..1137 | 86..1222 | 98 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:26:53 Download gff for
FI08254.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7755-RA | 1..1137 | 86..1222 | 98 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-09-08 12:19:46 Download gff for
FI08254.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7755-RA | 1..1137 | 86..1222 | 98 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:56:37 Download gff for
FI08254.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7755-RA | 1..1137 | 86..1222 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:08:17 Download gff for
FI08254.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7755-RA | 1..1320 | 1..1322 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:11:16 Download gff for
FI08254.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7755-RA | 1..1317 | 1..1319 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:26:53 Download gff for
FI08254.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7755-RA | 1..1317 | 1..1319 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-25 10:59:18 Download gff for
FI08254.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7755-RA | 1..1320 | 1..1322 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:56:37 Download gff for
FI08254.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7755-RA | 1..1317 | 1..1319 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:40:36 Download gff for
FI08254.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 16281626..16282946 | 1..1323 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:40:36 Download gff for
FI08254.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 16281626..16282946 | 1..1323 | 98 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 18:40:36 Download gff for
FI08254.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 16281626..16282946 | 1..1323 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:26:53 Download gff for
FI08254.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 12169131..12170451 | 1..1323 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:41:30 Download gff for
FI08254.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 16282825..16284145 | 1..1323 | 98 | | Minus |
FI08254.hyp2 Sequence
Translation from 0 to 1221
> FI08254.hyp2
KYLCIQLWGQFVSLAYLADTFLGFIFKIMLRCPKVTQSMLARISVRHFAD
EIHGSVRAAYAKGDARADPVNVLPKSKYGGINTVSLVTGTTIIGQQGAQF
VSSLLSSSRVPVEVQVIEAGQDDEYFHSVLRNRTAVHVDNQADAEAKQKA
LKICNDLDLYVFKTRTRSFPGFKCRFPGVDIQLIGQNNMGIFNELEYSPV
EGVVEALSVVSQKGNDKYLRYAFKAAAKAGRKRVTLINKAKEWPISDGSL
VEAAQRLHCHYKDCLELELMEVEEAISRLMTEPTYFDCLFASERYATFLS
AICSGVCGGANLFSAVEIGDHHAVFKPLQTKLSLTNYANLSAYGIVSTIV
DLFQHLGHDKCADALWCELKRTMDEGIRTKEFGGQDTGEYVICNIINQLR
CRALGK*
FI08254.hyp2 Blast Records
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:20:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7755-PA | 378 | CG7755-PA | 1..378 | 29..406 | 1958 | 100 | Plus |
CG5028-PC | 392 | CG5028-PC | 49..389 | 73..402 | 411 | 31.3 | Plus |
CG5028-PD | 393 | CG5028-PD | 49..389 | 73..402 | 411 | 31.3 | Plus |
CG5028-PB | 402 | CG5028-PB | 49..389 | 73..402 | 411 | 31.3 | Plus |
CG5028-PA | 402 | CG5028-PA | 49..389 | 73..402 | 411 | 31.3 | Plus |
Idh3b-PB | 370 | CG6439-PB | 2..357 | 38..387 | 288 | 23.9 | Plus |
Idh3b-PA | 370 | CG6439-PA | 2..357 | 38..387 | 288 | 23.9 | Plus |
l(1)G0156-PC | 354 | CG12233-PC | 10..340 | 70..385 | 233 | 22.5 | Plus |
l(1)G0156-PA | 354 | CG12233-PA | 10..340 | 70..385 | 233 | 22.5 | Plus |
l(1)G0156-PD | 377 | CG12233-PD | 33..363 | 70..385 | 233 | 22.5 | Plus |
CG32026-PA | 719 | CG32026-PA | 470..704 | 158..385 | 218 | 24.3 | Plus |
CG3483-PA | 391 | CG3483-PA | 72..377 | 84..385 | 196 | 21.2 | Plus |
FI08254.hyp Sequence
Translation from 1 to 1221
> FI08254.hyp
KYLCIQLWGQFVSLAYLADTFLGFIFKIMLRCPKVTQSMLARISVRHFAD
EIHGSVRAAYAKGDARADPVNVLPKSKYGGINTVSLVTGTTIIGQQGAQF
VSSLLSSSRVPVEVQVIEAGQDDEYFHSVLRNRTAVHVDNQADAEAKQKA
LKICNDLDLYVFKTRTRSFPGFKCRFPGVDIQLIGQNNMGIFNELEYSPV
EGVVEALSVVSQKGNDKYLRYAFKAAAKAGRKRVTLINKAKEWPISDGSL
VEAAQRLHCHYKDCLELELMEVEEAISRLMTEPTYFDCLFASERYATFLS
AICSGVCGGANLFSAVEIGDHHAVFKPLQTKLSLTNYANLSAYGIVSTIV
DLFQHLGHDKCADALWCELKRTMDEGIRTKEFGGQDTGEYVICNIINQLR
CRALGK*
FI08254.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:58:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7755-PA | 378 | CG7755-PA | 1..378 | 29..406 | 1958 | 100 | Plus |
CG5028-PC | 392 | CG5028-PC | 49..389 | 73..402 | 411 | 31.3 | Plus |
CG5028-PD | 393 | CG5028-PD | 49..389 | 73..402 | 411 | 31.3 | Plus |
CG5028-PB | 402 | CG5028-PB | 49..389 | 73..402 | 411 | 31.3 | Plus |
CG5028-PA | 402 | CG5028-PA | 49..389 | 73..402 | 411 | 31.3 | Plus |
FI08254.pep Sequence
Translation from 85 to 1221
> FI08254.pep
MLRCPKVTQSMLARISVRHFADEIHGSVRAAYAKGDARADPVNVLPKSKY
GGINTVSLVTGTTIIGQQGAQFVSSLLSSSRVPVEVQVIEAGQDDEYFHS
VLRNRTAVHVDNQADAEAKQKALKICNDLDLYVFKTRTRSFPGFKCRFPG
VDIQLIGQNNMGIFNELEYSPVEGVVEALSVVSQKGNDKYLRYAFKAAAK
AGRKRVTLINKAKEWPISDGSLVEAAQRLHCHYKDCLELELMEVEEAISR
LMTEPTYFDCLFASERYATFLSAICSGVCGGANLFSAVEIGDHHAVFKPL
QTKLSLTNYANLSAYGIVSTIVDLFQHLGHDKCADALWCELKRTMDEGIR
TKEFGGQDTGEYVICNIINQLRCRALGK*
FI08254.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 23:57:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF11274-PA | 382 | GF11274-PA | 14..379 | 6..376 | 1340 | 63.1 | Plus |
Dana\GF16768-PA | 402 | GF16768-PA | 49..389 | 45..374 | 435 | 32.7 | Plus |
Dana\GF22695-PA | 255 | GF22695-PA | 5..242 | 139..374 | 362 | 34.4 | Plus |
Dana\GF16953-PA | 371 | GF16953-PA | 40..360 | 55..361 | 256 | 25.3 | Plus |
Dana\GF20487-PA | 377 | GF20487-PA | 33..363 | 42..357 | 233 | 22.7 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 23:57:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG22281-PA | 378 | GG22281-PA | 1..378 | 1..378 | 1820 | 90.5 | Plus |
Dere\GG11421-PA | 402 | GG11421-PA | 49..389 | 45..374 | 436 | 32.4 | Plus |
Dere\GG12546-PA | 370 | GG12546-PA | 2..359 | 10..361 | 264 | 24.9 | Plus |
Dere\GG18052-PA | 377 | GG18052-PA | 33..363 | 42..357 | 236 | 23 | Plus |
Dere\GG22965-PA | 395 | GG22965-PA | 55..377 | 31..357 | 221 | 22.5 | Plus |
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 23:57:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dgri\GH22111-PA | 386 | GH22111-PA | 22..378 | 18..373 | 1130 | 58.9 | Plus |
Dgri\GH18988-PA | 402 | GH18988-PA | 12..389 | 2..374 | 422 | 30.7 | Plus |
Dgri\GH19869-PA | 370 | GH19869-PA | 39..359 | 55..361 | 260 | 25 | Plus |
Dgri\GH16376-PA | 361 | GH16376-PA | 8..334 | 43..357 | 254 | 23.3 | Plus |
Dgri\GH17867-PA | 354 | GH17867-PA | 10..340 | 42..357 | 230 | 22.4 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:49:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7755-PA | 378 | CG7755-PA | 1..378 | 1..378 | 1958 | 100 | Plus |
CG5028-PC | 392 | CG5028-PC | 49..389 | 45..374 | 411 | 31.3 | Plus |
CG5028-PD | 393 | CG5028-PD | 49..389 | 45..374 | 411 | 31.3 | Plus |
CG5028-PB | 402 | CG5028-PB | 49..389 | 45..374 | 411 | 31.3 | Plus |
CG5028-PA | 402 | CG5028-PA | 49..389 | 45..374 | 411 | 31.3 | Plus |
Idh3b-PB | 370 | CG6439-PB | 2..357 | 10..359 | 288 | 23.9 | Plus |
Idh3b-PA | 370 | CG6439-PA | 2..357 | 10..359 | 288 | 23.9 | Plus |
l(1)G0156-PC | 354 | CG12233-PC | 10..340 | 42..357 | 233 | 22.5 | Plus |
l(1)G0156-PA | 354 | CG12233-PA | 10..340 | 42..357 | 233 | 22.5 | Plus |
l(1)G0156-PD | 377 | CG12233-PD | 33..363 | 42..357 | 233 | 22.5 | Plus |
CG32026-PA | 719 | CG32026-PA | 470..704 | 130..357 | 218 | 24.3 | Plus |
CG3483-PA | 391 | CG3483-PA | 72..377 | 56..357 | 196 | 21.2 | Plus |
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 23:57:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dmoj\GI20290-PA | 386 | GI20290-PA | 4..381 | 2..378 | 1157 | 56.7 | Plus |
Dmoj\GI22415-PA | 402 | GI22415-PA | 49..389 | 45..374 | 434 | 32.7 | Plus |
Dmoj\GI22037-PA | 370 | GI22037-PA | 39..369 | 55..371 | 264 | 25.4 | Plus |
Dmoj\GI11568-PA | 354 | GI11568-PA | 24..340 | 53..357 | 240 | 24.5 | Plus |
Dmoj\GI16435-PA | 377 | GI16435-PA | 33..363 | 42..357 | 237 | 23.3 | Plus |
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 23:57:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dper\GL11354-PA | 395 | GL11354-PA | 42..390 | 30..378 | 1249 | 65.3 | Plus |
Dper\GL21529-PA | 402 | GL21529-PA | 49..389 | 45..374 | 436 | 32.1 | Plus |
Dper\GL23725-PA | 378 | GL23725-PA | 127..365 | 123..359 | 258 | 27.7 | Plus |
Dper\GL14780-PA | 351 | GL14780-PA | 26..351 | 39..376 | 186 | 21.9 | Plus |
Dper\GL20101-PA | 411 | GL20101-PA | 71..409 | 33..369 | 175 | 19.7 | Plus |
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 23:57:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dpse\GA24694-PA | 395 | GA24694-PA | 42..390 | 30..378 | 1249 | 65.3 | Plus |
Dpse\GA18606-PA | 402 | GA18606-PA | 49..389 | 45..374 | 436 | 32.1 | Plus |
Dpse\GA19594-PA | 378 | GA19594-PA | 127..365 | 123..359 | 258 | 27.7 | Plus |
Dpse\GA11495-PA | 373 | GA11495-PA | 26..373 | 39..376 | 235 | 22.5 | Plus |
Dpse\GA16620-PA | 332 | GA16620-PA | 82..317 | 129..357 | 212 | 24.8 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 23:57:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM20069-PA | 378 | GM20069-PA | 1..378 | 1..378 | 1991 | 97.4 | Plus |
Dsec\GM10262-PA | 321 | GM10262-PA | 3..317 | 72..374 | 397 | 32 | Plus |
Dsec\GM23677-PA | 370 | GM23677-PA | 2..359 | 10..361 | 266 | 24.9 | Plus |
Dsec\GM22739-PA | 377 | GM22739-PA | 33..363 | 42..357 | 235 | 23 | Plus |
Dsec\GM11859-PA | 389 | GM11859-PA | 70..375 | 56..357 | 189 | 21.2 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 23:57:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD25550-PA | 378 | GD25550-PA | 1..378 | 1..378 | 1991 | 97.4 | Plus |
Dsim\GD21232-PA | 392 | GD21232-PA | 48..388 | 45..374 | 428 | 31.8 | Plus |
Dsim\GD18486-PA | 370 | GD18486-PA | 2..359 | 10..361 | 266 | 24.9 | Plus |
Dsim\GD15579-PA | 377 | GD15579-PA | 33..363 | 42..357 | 236 | 23 | Plus |
Dsim\GD14133-PA | 722 | GD14133-PA | 472..707 | 129..357 | 211 | 24.4 | Plus |
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 23:57:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dvir\GJ22018-PA | 392 | GJ22018-PA | 37..382 | 28..373 | 1153 | 61 | Plus |
Dvir\GJ10975-PA | 402 | GJ10975-PA | 49..389 | 45..374 | 426 | 32.4 | Plus |
Dvir\GJ24090-PA | 371 | GJ24090-PA | 2..360 | 10..361 | 256 | 25.2 | Plus |
Dvir\GJ11248-PA | 367 | GJ11248-PA | 23..340 | 52..357 | 237 | 23.9 | Plus |
Dvir\GJ20729-PA | 426 | GJ20729-PA | 177..424 | 129..371 | 235 | 25.4 | Plus |
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 23:57:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dwil\GK19318-PA | 388 | GK19318-PA | 37..385 | 30..378 | 1198 | 62.2 | Plus |
Dwil\GK12856-PA | 402 | GK12856-PA | 49..389 | 45..374 | 436 | 32.7 | Plus |
Dwil\GK13007-PA | 370 | GK13007-PA | 30..357 | 47..359 | 256 | 23.9 | Plus |
Dwil\GK25509-PA | 379 | GK25509-PA | 35..379 | 42..376 | 230 | 21.8 | Plus |
Dwil\GK19462-PA | 390 | GK19462-PA | 8..296 | 76..357 | 222 | 22.5 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 23:57:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE14076-PA | 378 | GE14076-PA | 1..378 | 1..378 | 1836 | 91.3 | Plus |
Dyak\GE23616-PA | 402 | GE23616-PA | 49..389 | 45..374 | 427 | 31.8 | Plus |
Dyak\GE24066-PA | 370 | GE24066-PA | 2..359 | 10..361 | 265 | 24.9 | Plus |
Dyak\GE14404-PA | 393 | GE14404-PA | 70..375 | 56..357 | 212 | 22.5 | Plus |