Clone FI08434 Report

Search the DGRC for FI08434

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:84
Well:34
Vector:pOTB7
Associated Gene/Transcriptbeta4GalT7-RA
Protein status:FI08434.pep: gold
Sequenced Size:1105

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
beta4GalT7 2008-12-18 5.12 accounting

Clone Sequence Records

FI08434.complete Sequence

1105 bp assembled on 2008-09-15

GenBank Submission: BT044519.1

> FI08434.complete
GCACACTTCCAACCGGCAGCTAAAAAGTTTATAATATTTTCCGCCTATGG
CCCGACTTCGTTCAAACCACTGGACTTCTGTATAAAAGCGGCTCCAAATG
GTGAATATATCCACCATAAACTGGGTCTTCGTCTGCGGCCTGTCCTTTTG
CCTGGGCGGGATTGCGGTGCTCAGTCTCATGCCATTGGGATCAGACTGCG
TGTGCCCGCTGTCCAATCCGCTGGCCAAGCTTGCCGGTGGCGGAGAAGGA
GTATCCGTGATTAAGAAAGAGCCAGCCGATGAGAAGCAGCCACAGCCACA
TGACCACGGTGCGTCCGTACACAAGATGGCACTGCTGGTGCCGTTTCGAG
ACCGATTTGAGGAACTCCTCCAGTTCGTCCCCCACATGACCGCCTTTTTG
AAGCGGCAGGGCGTGGCGCACCACATCTTTGTGCTGAACCAGGTGGACAG
GTTCCGCTTCAATCGCGCCTCTCTCATCAACGTGGGTTTCCAGTTTGCCA
GCGATGTGTACGATTACATTGCCATGCACGACGTAGACTTGCTGCCCTTG
AATGACAATCTGCTCTATGAGTATCCCAGCAGCTTGGGACCACTGCACAT
CGCCGGACCGAAGCTACATCCCAAATACCACTATGATAACTTCGTTGGAG
GAATATTACTGGTGCGACGCGAGCACTTTAAGCAGATGAACGGCATGTCG
AACCAGTACTGGGGCTGGGGATTAGAGGACGACGAGTTCTTCGTGCGCAT
CCGGGATGCAGGACTGCAGGTGACGCGGCCGCAGAACATTAAGACTGGCA
CTAATGATACATTCAGCCATATTCACAACCGCTATCATCGTAAGCGGGAC
ACCCAGAAGTGCTTCAACCAGAAGGAGATGACCCGCAAGCGGGACCACAA
GACGGGCCTGGACAACGTGAAGTACAAAATACTTAAGGTGCATGAGATGC
TCATTGACCAGGTGCCGGTGACCATCCTCAACATTTTGCTCGATTGTGAT
GTTAATAAAACGCCTTGGTGCGACTGTTCCGGAACGGCAGCGGCTGCATC
GGCGGTACAAACCTGATGGGTTGTGTTAAACCAAAAAAAAAAAAAAAAAA
AAAAA

FI08434.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:01:16
Subject Length Description Subject Range Query Range Score Percent Strand
beta4GalT7-RA 1194 beta4GalT7-RA 78..1162 1..1085 5395 99.8 Plus
CG11781-RA 609 CG11781-RA 551..608 1085..1028 290 100 Minus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 14:52:46
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 20846711..20847334 193..816 3120 100 Plus
chr3R 27901430 chr3R 20847398..20847667 813..1082 1305 98.9 Plus
chr3R 27901430 chr3R 20846458..20846651 1..194 955 99.5 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:20:58 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 14:52:44
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 25023526..25024149 193..816 3105 99.8 Plus
3R 32079331 3R 25024213..25024485 813..1085 1350 99.6 Plus
3R 32079331 3R 25023273..25023466 1..194 970 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:19:54
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 24764357..24764980 193..816 3105 99.8 Plus
3R 31820162 3R 24765044..24765316 813..1085 1350 99.6 Plus
3R 31820162 3R 24764104..24764297 1..194 970 100 Plus
Blast to na_te.dros performed on 2019-03-15 14:52:44 has no hits.

FI08434.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 14:53:54 Download gff for FI08434.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 20846458..20846651 1..194 99 -> Plus
chr3R 20846713..20847334 195..816 100 -> Plus
chr3R 20847402..20847667 817..1082 98   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:58:46 Download gff for FI08434.complete
Subject Subject Range Query Range Percent Splice Strand
beta4GalT7-RA 1..969 98..1066 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:01:31 Download gff for FI08434.complete
Subject Subject Range Query Range Percent Splice Strand
beta4GalT7-RA 1..969 98..1066 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 00:47:22 Download gff for FI08434.complete
Subject Subject Range Query Range Percent Splice Strand
beta4GalT7-RA 1..969 98..1066 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:13:03 Download gff for FI08434.complete
Subject Subject Range Query Range Percent Splice Strand
beta4GalT7-RA 1..969 98..1066 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:19:56 Download gff for FI08434.complete
Subject Subject Range Query Range Percent Splice Strand
beta4GalT7-RA 1..1082 1..1082 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:01:31 Download gff for FI08434.complete
Subject Subject Range Query Range Percent Splice Strand
beta4GalT7-RA 1..1082 1..1082 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:47:22 Download gff for FI08434.complete
Subject Subject Range Query Range Percent Splice Strand
beta4GalT7-RA 18..1099 1..1082 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 12:13:48 Download gff for FI08434.complete
Subject Subject Range Query Range Percent Splice Strand
beta4GalT7-RA 1..1082 1..1082 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:13:03 Download gff for FI08434.complete
Subject Subject Range Query Range Percent Splice Strand
beta4GalT7-RA 18..1099 1..1082 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:53:54 Download gff for FI08434.complete
Subject Subject Range Query Range Percent Splice Strand
3R 25023273..25023466 1..194 100 -> Plus
3R 25023528..25024149 195..816 99 -> Plus
3R 25024217..25024482 817..1082 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:53:54 Download gff for FI08434.complete
Subject Subject Range Query Range Percent Splice Strand
3R 25023273..25023466 1..194 100 -> Plus
3R 25023528..25024149 195..816 99 -> Plus
3R 25024217..25024482 817..1082 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:53:54 Download gff for FI08434.complete
Subject Subject Range Query Range Percent Splice Strand
3R 25023273..25023466 1..194 100 -> Plus
3R 25023528..25024149 195..816 99 -> Plus
3R 25024217..25024482 817..1082 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:47:22 Download gff for FI08434.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 20848995..20849188 1..194 100 -> Plus
arm_3R 20849250..20849871 195..816 99 -> Plus
arm_3R 20849939..20850204 817..1082 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:28:58 Download gff for FI08434.complete
Subject Subject Range Query Range Percent Splice Strand
3R 24764359..24764980 195..816 99 -> Plus
3R 24765048..24765313 817..1082 99   Plus
3R 24764104..24764297 1..194 100 -> Plus

FI08434.hyp Sequence

Translation from 97 to 1065

> FI08434.hyp
MVNISTINWVFVCGLSFCLGGIAVLSLMPLGSDCVCPLSNPLAKLAGGGE
GVSVIKKEPADEKQPQPHDHGASVHKMALLVPFRDRFEELLQFVPHMTAF
LKRQGVAHHIFVLNQVDRFRFNRASLINVGFQFASDVYDYIAMHDVDLLP
LNDNLLYEYPSSLGPLHIAGPKLHPKYHYDNFVGGILLVRREHFKQMNGM
SNQYWGWGLEDDEFFVRIRDAGLQVTRPQNIKTGTNDTFSHIHNRYHRKR
DTQKCFNQKEMTRKRDHKTGLDNVKYKILKVHEMLIDQVPVTILNILLDC
DVNKTPWCDCSGTAAAASAVQT*

FI08434.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:42:27
Subject Length Description Subject Range Query Range Score Percent Strand
beta4GalT7-PA 322 CG11780-PA 1..322 1..322 1735 100 Plus
beta4GalNAcTA-PA 403 CG8536-PA 153..385 50..283 329 32 Plus
beta4GalNAcTB-PA 323 CG14517-PA 109..262 75..227 273 35.9 Plus

FI08434.pep Sequence

Translation from 97 to 1065

> FI08434.pep
MVNISTINWVFVCGLSFCLGGIAVLSLMPLGSDCVCPLSNPLAKLAGGGE
GVSVIKKEPADEKQPQPHDHGASVHKMALLVPFRDRFEELLQFVPHMTAF
LKRQGVAHHIFVLNQVDRFRFNRASLINVGFQFASDVYDYIAMHDVDLLP
LNDNLLYEYPSSLGPLHIAGPKLHPKYHYDNFVGGILLVRREHFKQMNGM
SNQYWGWGLEDDEFFVRIRDAGLQVTRPQNIKTGTNDTFSHIHNRYHRKR
DTQKCFNQKEMTRKRDHKTGLDNVKYKILKVHEMLIDQVPVTILNILLDC
DVNKTPWCDCSGTAAAASAVQT*

FI08434.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 12:40:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\beta4GalT7-PA 318 GF16319-PA 1..318 1..322 1441 82.6 Plus
Dana\GF13490-PA 391 GF13490-PA 141..374 50..284 324 32.4 Plus
Dana\GF18727-PA 323 GF18727-PA 96..306 59..277 266 30.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 12:40:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\beta4GalT7-PA 322 GG11346-PA 1..322 1..322 1692 97.2 Plus
Dere\GG20439-PA 403 GG20439-PA 153..386 50..284 314 30.6 Plus
Dere\GG12042-PA 323 GG12042-PA 109..262 75..227 256 35.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 12:40:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH22239-PA 310 GH22239-PA 1..310 1..322 1386 78.9 Plus
Dgri\GH21793-PA 410 GH21793-PA 160..393 50..284 305 33.2 Plus
Dgri\GH23682-PA 322 GH23682-PA 100..305 66..277 295 34.4 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:48:16
Subject Length Description Subject Range Query Range Score Percent Strand
beta4GalT7-PA 322 CG11780-PA 1..322 1..322 1735 100 Plus
beta4GalNAcTA-PA 403 CG8536-PA 153..385 50..283 329 32 Plus
beta4GalNAcTB-PA 323 CG14517-PA 109..262 75..227 273 35.9 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 12:40:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\beta4GalT7-PA 309 GI22222-PA 1..309 1..322 1428 82.6 Plus
Dmoj\GI20541-PA 406 GI20541-PA 156..389 50..284 311 33.6 Plus
Dmoj\GI24526-PA 322 GI24526-PA 100..305 66..277 298 34.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 12:40:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL24409-PA 569 GL24409-PA 282..569 34..322 1304 81.4 Plus
Dper\GL23283-PA 322 GL23283-PA 95..261 59..227 288 36 Plus
Dper\GL10126-PA 196 GL10126-PA 2..179 103..284 254 34.8 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 12:40:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA11195-PA 321 GA11195-PA 1..321 1..322 1463 83 Plus
Dpse\GA21145-PA 399 GA21145-PA 149..381 50..283 327 34.7 Plus
Dpse\GA13048-PA 322 GA13048-PA 95..261 59..227 292 36.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 12:40:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\beta4GalT7-PA 195 GM17784-PA 1..195 1..196 986 95.4 Plus
Dsec\GM17785-PA 97 GM17785-PA 1..97 227..322 484 94.8 Plus
Dsec\GM21525-PA 403 GM21525-PA 153..386 50..284 324 31.8 Plus
Dsec\GM12269-PA 323 GM12269-PA 96..262 59..227 268 34.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 12:40:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\beta4GalT7-PA 321 GD21157-PA 183..321 184..322 755 99.3 Plus
Dsim\beta4GalT7-PA 321 GD21157-PA 1..108 1..108 552 94.4 Plus
Dsim\GD11035-PA 414 GD11035-PA 153..397 50..284 301 30.4 Plus
Dsim\GD18000-PA 323 GD18000-PA 109..262 75..227 261 35.9 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 12:40:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ24343-PA 308 GJ24343-PA 1..308 1..322 1442 82.6 Plus
Dvir\GJ22392-PA 406 GJ22392-PA 156..389 50..284 307 33.2 Plus
Dvir\GJ22594-PA 322 GJ22594-PA 98..305 62..277 291 32.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 12:40:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK14189-PA 319 GK14189-PA 1..319 1..322 1470 82.3 Plus
Dwil\GK20782-PA 384 GK20782-PA 134..366 50..283 325 32.8 Plus
Dwil\GK22603-PA 316 GK22603-PA 89..255 59..227 269 33.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 12:40:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\beta4GalT7-PA 322 GE23542-PA 1..322 1..322 1687 96.9 Plus
Dyak\GE13570-PA 403 GE13570-PA 153..386 50..284 316 31 Plus
Dyak\GE10481-PA 323 GE10481-PA 109..262 75..227 259 35.9 Plus