Clone FI08521 Report

Search the DGRC for FI08521

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:85
Well:21
Vector:pOTB7
Associated Gene/TranscriptCG17180-RA
Protein status:FI08521.pep: gold
Sequenced Size:1140

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG17180 2008-12-18 5.12 accounting

Clone Sequence Records

FI08521.complete Sequence

1140 bp assembled on 2008-09-12

GenBank Submission: BT044408.1

> FI08521.complete
AAAAGGCTCGATATAGGTAAGGTGGACCTCAGCCTGAACAGGGCCTAATG
CAAATACATTCGATAAATAGATGTTATCGATAACCATTTGTCTGCCTAAA
GTTCCTTGGATTGAAAAGACCAGTGCAGAATGTCGCACCGCCACCAGGAC
ATTCCCATCCGCCCACGTTACGGTTATGTGGCCGAGGAGAGTGGCCCATC
GGAAGGGGCAGCCAGGAGTTCCGGATCCGGAGCCACGCCCGCCTCCTCCT
ACACGGAAATTCCGTTCCTGGCTCAGTATCCGGGAGCGGTGCCAGAGCAC
GTGCTCCAGGATCTGACGCCCACAGCCACTGGCCATGCTGCGATTCCCGG
AAGCACAAAGACAAGACCCAACGGCGAGAAATACCTTAACCTGGATTCGG
GCGAGGATCCCGACGAGGAAGACGATCCCTTGGAGGAGGAGGACAACAGC
AACTCGAATAGCAACTCCAAGGGCAGTTCCGGCGACATCGAGAGGCACAG
ACTGAAGGCAGAGAGCACTGTGCCCTACGAGCTGGACGGCGAAACCAGTG
ACTCCGACGGGATGCGCCACTTTGTGGCCCACGATCTAGAGGCCAAGTTG
CGCGAGCGCGTGGCGGCTTCGGCCTACTCCTCGGAGCACACCACGCCCCT
GAGCTCCATGGGTCCCATTGGAGCCACTTCCGGCAACGGTCTGCTCACGC
GGCGGTTCCTGCAGTCGCGCAACATTCCCGAAGTGGACGGCAGCGTCTTG
AGCGACATCGAACTGGAGGCTCAGTACTTGGCCAGCTCGGTGGACAATCT
GATGGAGAACCTTGGCAACCTGCTACACTCGATCTCTTCCATAACTGCCG
ACAACGTGGAGGTCCACCGCAACGCGGTCAACAAGCTGACGGACACTTTG
GACGCGAATATCAAGTGCCAGTATCAATTGCTGGCCAAGGCGGAGGAAAT
CACCAAGTCGATGAAACCCACAGAGCAGCTGGGTCAGCGCATAAGGCAGA
TCAAGCGGCTGGTGGACATGTTGGACAGCACCATGTAAAATAGGGCTACG
CTATCCTGTGATCAACCAATCAAAGAGATCTTGTCTTTCTAGTCATTCCG
TAAATACATATAATCAGTGTTATAAAAAAAAAAAAAAAAA

FI08521.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:01:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG17180-RA 1123 CG17180-RA 1..1123 1..1123 5435 98.9 Plus
Cypl-RA 837 Cypl-RA 727..837 1127..1017 555 100 Minus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 17:14:26
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 541341..541815 518..992 2255 98.3 Plus
chr3L 24539361 chr3L 540857..541284 90..517 2065 98.8 Plus
chr3L 24539361 chr3L 541868..542003 988..1123 665 99.3 Plus
chr3L 24539361 chr3L 540707..540796 1..90 450 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:21:05 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 17:14:24
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 541485..541959 518..992 2255 98.3 Plus
3L 28110227 3L 541001..541428 90..517 2080 99.1 Plus
3L 28110227 3L 542012..542151 988..1127 685 99.3 Plus
3L 28110227 3L 540851..540940 1..90 450 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:19:39
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 541485..541959 518..992 2255 98.3 Plus
3L 28103327 3L 541001..541428 90..517 2080 99 Plus
3L 28103327 3L 542012..542151 988..1127 685 99.2 Plus
3L 28103327 3L 540851..540940 1..90 450 100 Plus
Blast to na_te.dros performed on 2019-03-15 17:14:24 has no hits.

FI08521.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 17:15:25 Download gff for FI08521.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 540707..540796 1..90 100 -> Plus
chr3L 540858..541284 91..517 98 -> Plus
chr3L 541341..541815 518..992 98 -> Plus
chr3L 541873..542003 993..1123 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:58:55 Download gff for FI08521.complete
Subject Subject Range Query Range Percent Splice Strand
CG17180-RA 1..909 130..1038 98   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:01:08 Download gff for FI08521.complete
Subject Subject Range Query Range Percent Splice Strand
CG17180-RA 1..909 130..1038 98   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:17:32 Download gff for FI08521.complete
Subject Subject Range Query Range Percent Splice Strand
CG17180-RA 1..909 130..1038 98   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:29:52 Download gff for FI08521.complete
Subject Subject Range Query Range Percent Splice Strand
CG17180-RA 1..909 130..1038 98   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:19:24 Download gff for FI08521.complete
Subject Subject Range Query Range Percent Splice Strand
CG17180-RA 1..1123 1..1123 98   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:01:08 Download gff for FI08521.complete
Subject Subject Range Query Range Percent Splice Strand
CG17180-RA 1..1123 1..1123 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:17:32 Download gff for FI08521.complete
Subject Subject Range Query Range Percent Splice Strand
CG17180-RA 1..1123 1..1123 98   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-12 15:55:00 Download gff for FI08521.complete
Subject Subject Range Query Range Percent Splice Strand
CG17180-RA 1..1123 1..1123 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:29:52 Download gff for FI08521.complete
Subject Subject Range Query Range Percent Splice Strand
CG17180-RA 1..1123 1..1123 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:15:25 Download gff for FI08521.complete
Subject Subject Range Query Range Percent Splice Strand
3L 540851..540940 1..90 100 -> Plus
3L 541002..541428 91..517 99 -> Plus
3L 541485..541959 518..992 98 -> Plus
3L 542017..542147 993..1123 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:15:25 Download gff for FI08521.complete
Subject Subject Range Query Range Percent Splice Strand
3L 540851..540940 1..90 100 -> Plus
3L 541002..541428 91..517 99 -> Plus
3L 541485..541959 518..992 98 -> Plus
3L 542017..542147 993..1123 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:15:25 Download gff for FI08521.complete
Subject Subject Range Query Range Percent Splice Strand
3L 540851..540940 1..90 100 -> Plus
3L 541002..541428 91..517 99 -> Plus
3L 541485..541959 518..992 98 -> Plus
3L 542017..542147 993..1123 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:17:32 Download gff for FI08521.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 540851..540940 1..90 100 -> Plus
arm_3L 541002..541428 91..517 99 -> Plus
arm_3L 541485..541959 518..992 98 -> Plus
arm_3L 542017..542147 993..1123 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:28:24 Download gff for FI08521.complete
Subject Subject Range Query Range Percent Splice Strand
3L 541002..541428 91..517 99 -> Plus
3L 541485..541959 518..992 98 -> Plus
3L 542017..542147 993..1123 100   Plus
3L 540851..540940 1..90 100 -> Plus

FI08521.pep Sequence

Translation from 129 to 1037

> FI08521.pep
MSHRHQDIPIRPRYGYVAEESGPSEGAARSSGSGATPASSYTEIPFLAQY
PGAVPEHVLQDLTPTATGHAAIPGSTKTRPNGEKYLNLDSGEDPDEEDDP
LEEEDNSNSNSNSKGSSGDIERHRLKAESTVPYELDGETSDSDGMRHFVA
HDLEAKLRERVAASAYSSEHTTPLSSMGPIGATSGNGLLTRRFLQSRNIP
EVDGSVLSDIELEAQYLASSVDNLMENLGNLLHSISSITADNVEVHRNAV
NKLTDTLDANIKCQYQLLAKAEEITKSMKPTEQLGQRIRQIKRLVDMLDS
TM*

FI08521.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 12:41:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF24756-PA 302 GF24756-PA 1..302 1..302 1043 76.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 12:41:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG14726-PA 304 GG14726-PA 1..304 1..302 1323 93.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 12:41:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH16232-PA 289 GH16232-PA 1..289 1..302 841 62.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:11:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG17180-PB 302 CG17180-PB 1..302 1..302 1542 100 Plus
CG17180-PA 302 CG17180-PA 1..302 1..302 1542 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 12:41:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI16659-PA 282 GI16659-PA 1..282 1..302 786 61.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 12:41:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL22495-PA 289 GL22495-PA 1..289 1..302 904 68.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 12:41:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA14369-PA 289 GA14369-PA 1..289 1..302 904 68.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 12:41:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM14343-PA 302 GM14343-PA 1..302 1..302 1539 96.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 12:41:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD11019-PA 302 GD11019-PA 1..302 1..302 1543 97 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 12:41:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ12911-PA 289 GJ12911-PA 1..289 1..302 803 61.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 12:41:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK16433-PA 275 GK16433-PA 1..275 1..302 812 65.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 12:41:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE21088-PA 302 GE21088-PA 1..302 1..302 1354 95 Plus

FI08521.hyp Sequence

Translation from 129 to 1037

> FI08521.hyp
MSHRHQDIPIRPRYGYVAEESGPSEGAARSSGSGATPASSYTEIPFLAQY
PGAVPEHVLQDLTPTATGHAAIPGSTKTRPNGEKYLNLDSGEDPDEEDDP
LEEEDNSNSNSNSKGSSGDIERHRLKAESTVPYELDGETSDSDGMRHFVA
HDLEAKLRERVAASAYSSEHTTPLSSMGPIGATSGNGLLTRRFLQSRNIP
EVDGSVLSDIELEAQYLASSVDNLMENLGNLLHSISSITADNVEVHRNAV
NKLTDTLDANIKCQYQLLAKAEEITKSMKPTEQLGQRIRQIKRLVDMLDS
TM*

FI08521.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:42:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG17180-PB 302 CG17180-PB 1..302 1..302 1542 100 Plus
CG17180-PA 302 CG17180-PA 1..302 1..302 1542 100 Plus