Clone FI08726 Report

Search the DGRC for FI08726

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:87
Well:26
Vector:pOTB7
Associated Gene/TranscriptCG3222-RA
Protein status:FI08726.pep: gold
Sequenced Size:1374

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG3222 2008-12-18 5.12 accounting

Clone Sequence Records

FI08726.complete Sequence

1374 bp assembled on 2008-09-15

GenBank Submission: BT044523.1

> FI08726.complete
GTTCGAGTTGGTTTGGTTGCTTCGACTACACACACAAAATTCGTCCCCAC
ACCCCAAACACAGAGAAACAAAAAAGTTGAGAAAATGTCGCAGCTGAACG
CGGAGACCCAGCAGAGGCACTTCATCACGCGCAGCAGTTATGAGGGCGCC
TGGGATAGATTGGTGAATGTGATGGACGGATTTGGGAGCTACCGCTATCC
GGATGGGAGCGAGTATCGAGGAAGGTTCCATCAGGGTCAGTTCCACGGCT
ATGGCCATTTGCGACTCGCCCAGCCGTACCGCTTTACGGTTAAGGGTGAG
TTCGAGCATGGTCGCCTGGTGACAGTGGAGGACATGTGGTTTTCCGACGG
TCTGCATGTGGATGGCAGATTTAATGGCATGGTCTTGCAGTGCGATGAAT
GGGATTACCTGACGCCGAAGGATCGGCGTTATCATGCCGAGCGTCGTTAT
GGCCAACAGCCGGTTGGCCCCACTGCCTTTCTTACATCCAAAATGCAACC
CAGAAATATTCCCGAACATTGCTATGATGTGGAGGAGGGTCTGTTCAATA
GTAAGACCTGTTGGTTGACGGACCGTCCGAGTCCGCTCCATCAATTCATG
TACGTGAGCTGCCCGCAAGATAAGGATTGGATTAAGAAGAATTGCAGGAA
GGCTAGAACATCGCGTATAATTGAGCCACCATCCGACTTCTGTCGCCGCA
TTATAGCCAACAATTTGGCAACGGAACGAGCCCAGTTGCGAAGCACGGCC
ATATATGCACCCAATGGACAAGTGGATCGGGAGCGATACTTCCACAAGTT
GACCAAGAAACGTGGACAGCCGAATGAGCCGCTGGAGAACATTCCAAGGC
GTCCCATGCCCGTCGACGATCCCGCCTGGGAGACGGAGATGTGTGTGCGT
GCCTATGCCGGGATGTTGGATAAACAGCAGAAGGATCAAATGGAGTTTAA
GCGCGTGCATCCTTGCGCCAAAATGGAGACGGTGAAGAGACCACGCCGAT
GGTCGAGCACCTCAGATGTACGCAATCCGCAGTCGGGTGGACCCTCCAGC
TGCCAGACGGACAGCTTTGGCGAGGATGAACTGGTCCTAAACTTTGAGGA
ATCATACCGCTCGGCCAACAACATGATGAGGAAACGGACGGCGGATAACA
TAAATGTGGTGCAATCTAATCTAATACGCCGCAATAGCTACATGGACATG
ACCCGGTCCATATTCGAGTTGTAGATCCGCCGATCAATGTCTTTATATAT
GTTTTTTTCAATTTAAAATTTAAGCTTAAGAGCTCGGAGAGAAAATGAAT
GCAATTACTTTGTAATCTGAAAAATAAAATTCAACGTTTTTAAAGTTTCT
TAGAAAAAAAAAAAAAAAAAAAAA

FI08726.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:01:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG3222-RA 1358 CG3222-RA 1..1356 1..1355 6590 99.1 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 20:17:13
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 9590856..9592209 1..1353 6540 99 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:21:13 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 20:17:11
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 9598988..9600343 1..1355 6580 99.2 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:19:50
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 9592088..9593443 1..1355 6590 99.1 Plus
Blast to na_te.dros performed 2019-03-16 20:17:12
Subject Length Description Subject Range Query Range Score Percent Strand
Stalker2 7672 Stalker2 STALKER2 7672bp 1409..1465 1353..1298 111 68.4 Minus

FI08726.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 20:18:25 Download gff for FI08726.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 9590856..9592209 1..1353 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:59:09 Download gff for FI08726.complete
Subject Subject Range Query Range Percent Splice Strand
CG3222-RA 1..1140 85..1224 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:01:24 Download gff for FI08726.complete
Subject Subject Range Query Range Percent Splice Strand
CG3222-RA 1..1140 85..1224 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:04:30 Download gff for FI08726.complete
Subject Subject Range Query Range Percent Splice Strand
CG3222-RA 1..1140 85..1224 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 15:56:56 Download gff for FI08726.complete
Subject Subject Range Query Range Percent Splice Strand
CG3222-RA 1..1140 85..1224 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:19:46 Download gff for FI08726.complete
Subject Subject Range Query Range Percent Splice Strand
CG3222-RA 1..1354 1..1353 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:01:24 Download gff for FI08726.complete
Subject Subject Range Query Range Percent Splice Strand
CG3222-RA 1..1354 1..1353 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:04:30 Download gff for FI08726.complete
Subject Subject Range Query Range Percent Splice Strand
CG3222-RA 1..1354 1..1353 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 12:13:38 Download gff for FI08726.complete
Subject Subject Range Query Range Percent Splice Strand
CG3222-RA 1..1354 1..1353 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 15:56:56 Download gff for FI08726.complete
Subject Subject Range Query Range Percent Splice Strand
CG3222-RA 1..1354 1..1353 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 20:18:25 Download gff for FI08726.complete
Subject Subject Range Query Range Percent Splice Strand
3L 9598988..9600341 1..1353 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 20:18:25 Download gff for FI08726.complete
Subject Subject Range Query Range Percent Splice Strand
3L 9598988..9600341 1..1353 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 20:18:25 Download gff for FI08726.complete
Subject Subject Range Query Range Percent Splice Strand
3L 9598988..9600341 1..1353 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:04:30 Download gff for FI08726.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 9592088..9593441 1..1353 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:28:48 Download gff for FI08726.complete
Subject Subject Range Query Range Percent Splice Strand
3L 9592088..9593441 1..1353 99   Plus

FI08726.pep Sequence

Translation from 0 to 1223

> FI08726.pep
VRVGLVASTTHTKFVPTPQTQRNKKVEKMSQLNAETQQRHFITRSSYEGA
WDRLVNVMDGFGSYRYPDGSEYRGRFHQGQFHGYGHLRLAQPYRFTVKGE
FEHGRLVTVEDMWFSDGLHVDGRFNGMVLQCDEWDYLTPKDRRYHAERRY
GQQPVGPTAFLTSKMQPRNIPEHCYDVEEGLFNSKTCWLTDRPSPLHQFM
YVSCPQDKDWIKKNCRKARTSRIIEPPSDFCRRIIANNLATERAQLRSTA
IYAPNGQVDRERYFHKLTKKRGQPNEPLENIPRRPMPVDDPAWETEMCVR
AYAGMLDKQQKDQMEFKRVHPCAKMETVKRPRRWSSTSDVRNPQSGGPSS
CQTDSFGEDELVLNFEESYRSANNMMRKRTADNINVVQSNLIRRNSYMDM
TRSIFEL*

FI08726.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 12:39:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF25142-PA 392 GF25142-PA 1..392 26..407 1384 64 Plus
Dana\GF20102-PA 316 GF20102-PA 18..228 41..239 222 28.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 12:39:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG15388-PA 380 GG15388-PA 1..380 29..407 1904 90.8 Plus
Dere\GG15389-PA 288 GG15389-PA 4..216 28..238 236 30.1 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 12:39:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH16306-PA 373 GH16306-PA 1..373 29..407 932 47.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:05:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG3222-PA 379 CG3222-PA 1..379 29..407 2072 100 Plus
CG3306-PA 288 CG3306-PA 3..216 27..238 250 30 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 12:39:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI13249-PA 376 GI13249-PA 1..376 29..407 926 48.2 Plus
Dmoj\GI13250-PA 299 GI13250-PA 1..215 29..245 247 31.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 12:39:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL10306-PA 393 GL10306-PA 9..393 36..407 993 50.1 Plus
Dper\GL19362-PA 347 GL19362-PA 1..347 29..407 963 49.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 12:39:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA25934-PA 369 GA25934-PA 1..369 29..407 1030 52.7 Plus
Dpse\GA28670-PA 393 GA28670-PA 9..393 36..407 1004 50.4 Plus
Dpse\GA17254-PA 313 GA17254-PA 21..225 36..239 232 30.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 12:39:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM25159-PA 363 GM25159-PA 1..363 29..407 1916 93.4 Plus
Dsec\GM25161-PA 94 GM25161-PA 1..94 314..407 495 98.9 Plus
Dsec\GM25162-PA 288 GM25162-PA 3..216 27..238 245 30 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 12:39:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD14193-PA 296 GD14193-PA 1..296 112..407 1573 96.6 Plus
Dsim\GD14195-PA 288 GD14195-PA 3..216 27..238 242 30 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 12:39:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ12020-PA 374 GJ12020-PA 1..374 29..407 947 48.2 Plus
Dvir\GJ12021-PA 302 GJ12021-PA 1..225 29..251 288 33.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 12:39:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK16617-PA 364 GK16617-PA 1..364 29..407 1012 51.8 Plus
Dwil\GK16618-PA 308 GK16618-PA 12..213 43..239 272 34 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 12:39:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE20853-PA 381 GE20853-PA 1..381 29..407 1884 89.8 Plus
Dyak\GE20854-PA 288 GE20854-PA 12..216 36..238 223 29.3 Plus

FI08726.hyp Sequence

Translation from 1 to 1223

> FI08726.hyp
FELVWLLRLHTQNSSPHPKHRETKKVEKMSQLNAETQQRHFITRSSYEGA
WDRLVNVMDGFGSYRYPDGSEYRGRFHQGQFHGYGHLRLAQPYRFTVKGE
FEHGRLVTVEDMWFSDGLHVDGRFNGMVLQCDEWDYLTPKDRRYHAERRY
GQQPVGPTAFLTSKMQPRNIPEHCYDVEEGLFNSKTCWLTDRPSPLHQFM
YVSCPQDKDWIKKNCRKARTSRIIEPPSDFCRRIIANNLATERAQLRSTA
IYAPNGQVDRERYFHKLTKKRGQPNEPLENIPRRPMPVDDPAWETEMCVR
AYAGMLDKQQKDQMEFKRVHPCAKMETVKRPRRWSSTSDVRNPQSGGPSS
CQTDSFGEDELVLNFEESYRSANNMMRKRTADNINVVQSNLIRRNSYMDM
TRSIFEL*

FI08726.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:43:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG3222-PA 379 CG3222-PA 1..379 29..407 2072 100 Plus
CG3306-PA 288 CG3306-PA 3..216 27..238 250 30 Plus