Clone FI08729 Report

Search the DGRC for FI08729

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:87
Well:29
Vector:pOTB7
Associated Gene/Transcriptsinah-RC
Protein status:FI08729.pep: gold
Sequenced Size:1469

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
sinah 2008-12-18 5.12 accounting

Clone Sequence Records

FI08729.complete Sequence

1469 bp assembled on 2008-08-28

GenBank Submission: BT044413.1

> FI08729.complete
CTTTTAGCTTCGTTGTATTGTGGTACAGATTGTATTTTCGAATTCTTTTA
AGCAAAATTTCAGTGTTCAGAAAAAGTAAAAAAAAAAGTAAAACCATCGG
CACTCTCATTCTTCAGAATCGTTTGGTTGTTAGGTCTTAGGATTAATAGC
TTGCGCATTGATTGTTGGCTGAAGCACAGATGTCTGTTCGCAACTCACGC
CCCCAGTTATCGTGGCCGGAGCGGGTAAGTCCGCAAAGGACTATTGACAC
TCCAACGGCATCCGGAGAAATGTTGACTCGTCGTCAATCGGCACCAGCGT
TGGTCGTGCCGCCGGAGGAGACCACGCACGTTGTGGTGGTCAAGCGGCAA
TCCCCGGACGCAGCCGCTGCCGGAGAACTGGTGCCGTCTAGGCGGAAGGA
CTCGGTGGCTGTGCAGTCGGGAATTGTGGCCACTGGGCCATTGGACACAA
CACGCAGTGGTGCAAGAGACGATTTTCTAATGGCTTTGCTCGAGTGCCCG
GTGTGCTTTGGCTACATAATGCCGCCAATTATGCAGTGCCCGCGTGGCCA
CCTCATCTGCTCCACCTGCCGCTCAAAGTTGACCATTTGCCCCGTCTGCC
GGGTGTTCATGACCAACATCCGCAGCCTGGCAATGGAGAAGGTGGCCTCC
AAGCTGATCTTTCCCTGCAAGCATTCGCATTTCGGCTGCAGAGCGCGGCT
CTCTTACGCAGAGAAGACCAAGCACGAGGAGGATTGCGAATGCCGTCCGT
ACTTCTGCCCGTATCCGGATGACAAGTGCTCCTGGCAGGGACCGTTGAGG
GACGTATACCAGCACCTGATGAGCTCCCACGAGAACGTGATCACCATGGA
GGGCAACGACATCATCTTTTTGGCCACCAATGTGAATCTGGAGGGTGCCC
TCGACTGGACAATGGTGCAGTCCTGCCATGGGCGGCACTTCCTCCTCTCG
CTGGAGAAGATCAATTTGGGAGAGGACTGTCAGCAGTACTTCACCGCCTG
TCGGATGATCGGCTCCATGAAGGATGCCGCCGAGTTCGTGTATAACATCT
CCTTGGAGGCCTATAATCGCACTCTCCGCTGGCAATCCAAGCCAAGATCA
ATCCGTGAGAACTTCTCCTCGTTCACCAACGCCGACTTCCTGGTGCTCAA
TAAGCACACCGTCGAACTGTTCTCTGAGGACGGTAATCTTGCCCTGAACG
TGGTCATTAGGAAGGTGGAGGAGCGTACCAACTAACCCCTAGCGTATCCG
TATCTCTGCCCCCCCCTATAAATTGGACTTTCGTCGCTGATTGGTAGCTG
TTAGCGTGTTAGATAAGTGCATATTAAATTAATACATGTGCTAAGCTAGT
CCTATGAATTCCAATGAACTACTCAAAATCACTATGATTCAAAAGAATGG
TGTTGATGTTTTAAGGATTTACATTAGGAAAAGAATAAAGGATTGAAATG
TAAAAAAAAAAAAAAAAAA

FI08729.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:08:10
Subject Length Description Subject Range Query Range Score Percent Strand
sinah-RC 1450 sinah-RC 1..1447 1..1448 7200 99.9 Plus
nc_13077.a 637 nc_13077.a 1..365 1299..935 1825 100 Minus
nc_13077.a 637 nc_13077.a 362..637 815..540 1380 100 Minus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 04:59:55
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 16848572..16850022 1..1451 7255 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:21:14 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 04:59:53
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 16859080..16860530 1..1452 7195 99.9 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:26:18
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 16852180..16853630 1..1452 7205 99.8 Plus
Blast to na_te.dros performed on 2019-03-16 04:59:53 has no hits.

FI08729.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 05:01:06 Download gff for FI08729.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 16848572..16850022 1..1451 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:59:10 Download gff for FI08729.complete
Subject Subject Range Query Range Percent Splice Strand
sinah-RB 1..966 270..1235 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:11:54 Download gff for FI08729.complete
Subject Subject Range Query Range Percent Splice Strand
sinah-RC 1..1056 180..1235 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:10:23 Download gff for FI08729.complete
Subject Subject Range Query Range Percent Splice Strand
sinah-RC 1..1056 180..1235 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-09-08 12:19:59 Download gff for FI08729.complete
Subject Subject Range Query Range Percent Splice Strand
CG13030-RA 1..1056 180..1235 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 05:56:57 Download gff for FI08729.complete
Subject Subject Range Query Range Percent Splice Strand
sinah-RC 1..1056 180..1235 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:09:21 Download gff for FI08729.complete
Subject Subject Range Query Range Percent Splice Strand
sinah-RB 1..1450 1..1451 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:11:54 Download gff for FI08729.complete
Subject Subject Range Query Range Percent Splice Strand
sinah-RC 1..1450 1..1451 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:10:23 Download gff for FI08729.complete
Subject Subject Range Query Range Percent Splice Strand
sinah-RC 1..1450 1..1451 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-28 18:06:35 Download gff for FI08729.complete
Subject Subject Range Query Range Percent Splice Strand
CG13030-RA 1..1448 1..1449 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 05:56:57 Download gff for FI08729.complete
Subject Subject Range Query Range Percent Splice Strand
sinah-RC 1..1450 1..1451 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:01:06 Download gff for FI08729.complete
Subject Subject Range Query Range Percent Splice Strand
3L 16859080..16860529 1..1451 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:01:06 Download gff for FI08729.complete
Subject Subject Range Query Range Percent Splice Strand
3L 16859080..16860529 1..1451 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:01:06 Download gff for FI08729.complete
Subject Subject Range Query Range Percent Splice Strand
3L 16859080..16860529 1..1451 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:10:23 Download gff for FI08729.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 16852180..16853629 1..1451 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:42:15 Download gff for FI08729.complete
Subject Subject Range Query Range Percent Splice Strand
3L 16852180..16853629 1..1451 99   Plus

FI08729.pep Sequence

Translation from 179 to 1234

> FI08729.pep
MSVRNSRPQLSWPERVSPQRTIDTPTASGEMLTRRQSAPALVVPPEETTH
VVVVKRQSPDAAAAGELVPSRRKDSVAVQSGIVATGPLDTTRSGARDDFL
MALLECPVCFGYIMPPIMQCPRGHLICSTCRSKLTICPVCRVFMTNIRSL
AMEKVASKLIFPCKHSHFGCRARLSYAEKTKHEEDCECRPYFCPYPDDKC
SWQGPLRDVYQHLMSSHENVITMEGNDIIFLATNVNLEGALDWTMVQSCH
GRHFLLSLEKINLGEDCQQYFTACRMIGSMKDAAEFVYNISLEAYNRTLR
WQSKPRSIRENFSSFTNADFLVLNKHTVELFSEDGNLALNVVIRKVEERT
N*

FI08729.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 12:19:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF23937-PA 328 GF23937-PA 1..324 31..348 1264 74 Plus
Dana\GF23936-PA 322 GF23936-PA 75..322 100..346 768 55.2 Plus
Dana\GF22449-PA 623 GF22449-PA 176..331 80..237 199 31.1 Plus
Dana\GF16720-PA 474 GF16720-PA 151..206 100..155 149 50 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 12:19:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG13585-PA 354 GG13585-PA 1..354 1..351 1573 81.9 Plus
Dere\sina-PA 314 GG13584-PA 67..314 100..346 768 55.2 Plus
Dere\GG13070-PA 161 GG13070-PA 12..94 129..217 284 59.6 Plus
Dere\GG18622-PA 635 GG18622-PA 207..342 100..241 206 32.6 Plus
Dere\GG11176-PA 427 GG11176-PA 141..196 100..155 150 50 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 12:19:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH16598-PA 315 GH16598-PA 35..314 74..350 1061 67.9 Plus
Dgri\GH16597-PA 311 GH16597-PA 64..311 100..346 767 55.2 Plus
Dgri\GH12778-PA 666 GH12778-PA 228..372 91..245 208 32.5 Plus
Dgri\GH22376-PA 314 GH22376-PA 129..217 87..179 173 37.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:22:23
Subject Length Description Subject Range Query Range Score Percent Strand
sinah-PC 351 CG13030-PC 1..351 1..351 1868 100 Plus
sina-PC 314 CG9949-PC 8..314 55..346 766 47.9 Plus
sina-PB 314 CG9949-PB 8..314 55..346 766 47.9 Plus
sina-PA 314 CG9949-PA 8..314 55..346 766 47.9 Plus
CG2681-PA 626 CG2681-PA 162..332 53..238 220 30.3 Plus
CG6688-PA 424 CG6688-PA 138..193 100..155 155 50 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 12:19:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI12444-PA 322 GI12444-PA 61..318 89..346 1117 75.6 Plus
Dmoj\GI12443-PA 314 GI12443-PA 67..314 100..346 765 54.8 Plus
Dmoj\GI15871-PA 558 GI15871-PA 123..258 88..221 182 31.6 Plus
Dmoj\GI22002-PA 290 GI22002-PA 130..264 87..218 170 31.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 12:19:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL20853-PA 340 GL20853-PA 1..340 31..351 1162 64.8 Plus
Dper\GL20852-PA 314 GL20852-PA 67..314 100..346 767 55.2 Plus
Dper\GL19914-PA 632 GL19914-PA 207..340 100..230 211 33.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 12:19:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA11985-PA 340 GA11985-PA 1..340 31..351 1167 65.1 Plus
Dpse\GA22147-PA 314 GA22147-PA 67..314 100..346 767 55.2 Plus
Dpse\GA15427-PA 630 GA15427-PA 207..340 100..230 210 33.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 12:19:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM25665-PA 352 GM25665-PA 1..352 1..351 1809 94.9 Plus
Dsec\GM25664-PA 314 GM25664-PA 67..314 100..346 767 55.2 Plus
Dsec\GM11718-PA 153 GM11718-PA 1..107 245..351 514 90.7 Plus
Dsec\GM19242-PA 627 GM19242-PA 170..336 65..241 210 31.8 Plus
Dsec\GM26478-PA 451 GM26478-PA 140..195 100..155 149 50 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 12:19:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD14672-PA 321 GD14672-PA 1..321 31..351 1674 95.6 Plus
Dsim\GD14671-PA 384 GD14671-PA 155..384 130..346 566 47.4 Plus
Dsim\GD14671-PA 384 GD14671-PA 67..198 100..237 461 59.4 Plus
Dsim\EG:100G10.2-PA 627 GD16617-PA 170..336 65..241 206 31.3 Plus
Dsim\GD20994-PA 424 GD20994-PA 138..193 100..155 150 50 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 12:19:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ12343-PA 313 GJ12343-PA 58..309 95..346 1117 77.4 Plus
Dvir\sina-PA 314 GJ12342-PA 67..314 100..346 767 55.2 Plus
Dvir\GJ14356-PA 252 GJ14356-PA 142..209 98..165 161 42.6 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 12:19:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK20883-PA 326 GK20883-PA 1..322 31..348 1221 68.4 Plus
Dwil\sina-PA 331 GK20872-PA 84..331 100..346 768 55.2 Plus
Dwil\GK16374-PA 652 GK16374-PA 220..357 100..247 198 32 Plus
Dwil\GK11484-PA 642 GK11484-PA 143..200 98..155 155 48.3 Plus
Dwil\GK11612-PA 96 GK11612-PA 15..78 103..163 141 48.4 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 12:19:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE19882-PA 347 GE19882-PA 1..343 1..347 1582 84.5 Plus
Dyak\GE19881-PA 314 GE19881-PA 67..314 100..346 768 55.2 Plus
Dyak\GE10344-PA 432 GE10344-PA 138..193 100..155 149 50 Plus

FI08729.hyp Sequence

Translation from 179 to 1234

> FI08729.hyp
MSVRNSRPQLSWPERVSPQRTIDTPTASGEMLTRRQSAPALVVPPEETTH
VVVVKRQSPDAAAAGELVPSRRKDSVAVQSGIVATGPLDTTRSGARDDFL
MALLECPVCFGYIMPPIMQCPRGHLICSTCRSKLTICPVCRVFMTNIRSL
AMEKVASKLIFPCKHSHFGCRARLSYAEKTKHEEDCECRPYFCPYPDDKC
SWQGPLRDVYQHLMSSHENVITMEGNDIIFLATNVNLEGALDWTMVQSCH
GRHFLLSLEKINLGEDCQQYFTACRMIGSMKDAAEFVYNISLEAYNRTLR
WQSKPRSIRENFSSFTNADFLVLNKHTVELFSEDGNLALNVVIRKVEERT
N*

FI08729.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:43:29
Subject Length Description Subject Range Query Range Score Percent Strand
sinah-PC 351 CG13030-PC 1..351 1..351 1868 100 Plus
sina-PC 314 CG9949-PC 8..314 55..346 766 47.9 Plus
sina-PB 314 CG9949-PB 8..314 55..346 766 47.9 Plus
sina-PA 314 CG9949-PA 8..314 55..346 766 47.9 Plus
CG2681-PA 626 CG2681-PA 162..332 53..238 220 30.3 Plus