Clone FI08810 Report

Search the DGRC for FI08810

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:88
Well:10
Vector:pBS SK-
Associated Gene/TranscriptCG11920-RA
Protein status:FI08810.pep: gold
Sequenced Size:1028

Clone Sequence Records

FI08810.complete Sequence

1028 bp assembled on 2009-05-13

GenBank Submission: BT083440.1

> FI08810.complete
TTTTCATTTATTTTCAACAGCACACGTGCAACCAGAAATATAATAACAAA
TAAAAATGCTGCGAAAACAAGCCAGACAGCGAAGGGAATACCTGTACAAT
AAAGCGCTCACTGAGCGCCTCAAGTCCAAACAAAAAATCCAGGAGACCGT
TGTGAAAAGCATTAATGAAAACAAAGCAATTGGCTCCAAAAATGTGAAGA
AAAGTCTCACCGCCTACAAGTCGCTGAAATACGCGGATGAGGGTGTCGAT
GACCGCACTGTCAATGATGAGTATCACTATGCCGGATGCGAGGATCCGAA
AATAATGCTGACCACCTCGCACAACCCTTCGTCGAGATTGAAAATGTTCA
TGAAGGAACTGCGGCTGATTATCCCAAATGCGCAGCAGATGAACAGAGGA
AACTACCAGCTGACTACACTAATGCACGCCTGTCGTGCCAATAATGTAAC
CGATTTCCTAATTGTCCATGAGCATCGTGGCATCCCGGACAGCCTTGTGG
TCTGTCATCTTCCGTACGGGCCAACTGCCTTCTTCAACATATCCGATGTG
GTTATGCGACATGATATACCCGACATTGGACACATGAGCGAGCAGAAGCC
ACACTTAATTTTTAATAACTTTAAAACGCCCATTGGCCTGAGAACTGTTA
AGATACTCAAACACTTGTTCCCAGTGCCCAAGGAGAACTCCCAAAGAGTT
ATGTCTTTCCTAAACCACAATGACTCGATTATATTCAGACATCATCAGTA
CAAATATGTGAACAAGGAGTTGGAGCTTACCGAAGTGGGCCCCAGATTCT
CACTGAAGCTGTACCAAATTAAGCTCGGCACTTTGGAGAACATCAAGGCA
GCTGACACGGAATGGATTAACCGACCTTATATGAATACCTCGCAGAAGAG
GCTCATATTTTCTAACGATCCGGGCATAATAAATAAGGACACCGAGGCTT
AGATTTAGAGATACCGAACGATTTAACAGAAATAAATTTGTTTTACTTTT
ATAATGTAAAAAAAAAAAAAAAAAAAAA

FI08810.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:26:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG11920-RA 1095 CG11920-RA 33..1041 1..1009 5045 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 06:52:12
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 20898791..20899556 242..1007 3770 99.5 Plus
chr3R 27901430 chr3R 20898054..20898297 1..244 1220 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:21:19 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 06:52:10
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 25075617..25076384 242..1009 3840 100 Plus
3R 32079331 3R 25074882..25075125 1..244 1220 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:20:37
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 24816448..24817215 242..1009 3840 100 Plus
3R 31820162 3R 24815713..24815956 1..244 1220 100 Plus
Blast to na_te.dros performed on 2019-03-16 06:52:10 has no hits.

FI08810.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 06:53:14 Download gff for FI08810.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 20898054..20898295 1..242 100 -> Plus
chr3R 20898792..20899556 243..1007 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 17:53:31 Download gff for FI08810.complete
Subject Subject Range Query Range Percent Splice Strand
CG11920-RA 1..897 56..952 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 13:51:56 Download gff for FI08810.complete
Subject Subject Range Query Range Percent Splice Strand
CG11920-RA 1..897 56..952 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 08:33:39 Download gff for FI08810.complete
Subject Subject Range Query Range Percent Splice Strand
CG11920-RA 1..897 56..952 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:21:40 Download gff for FI08810.complete
Subject Subject Range Query Range Percent Splice Strand
CG11920-RA 1..897 56..952 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-13 14:06:25 Download gff for FI08810.complete
Subject Subject Range Query Range Percent Splice Strand
CG11920-RA 1..1007 1..1007 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 13:51:55 Download gff for FI08810.complete
Subject Subject Range Query Range Percent Splice Strand
CG11920-RA 1..1007 1..1007 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:33:39 Download gff for FI08810.complete
Subject Subject Range Query Range Percent Splice Strand
CG11920-RA 6..1012 1..1007 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:21:40 Download gff for FI08810.complete
Subject Subject Range Query Range Percent Splice Strand
CG11920-RA 6..1012 1..1007 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:53:14 Download gff for FI08810.complete
Subject Subject Range Query Range Percent Splice Strand
3R 25074882..25075123 1..242 100 -> Plus
3R 25075618..25076382 243..1007 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:53:14 Download gff for FI08810.complete
Subject Subject Range Query Range Percent Splice Strand
3R 25074882..25075123 1..242 100 -> Plus
3R 25075618..25076382 243..1007 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:53:14 Download gff for FI08810.complete
Subject Subject Range Query Range Percent Splice Strand
3R 25074882..25075123 1..242 100 -> Plus
3R 25075618..25076382 243..1007 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:33:39 Download gff for FI08810.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 20900604..20900845 1..242 100 -> Plus
arm_3R 20901340..20902104 243..1007 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 11:42:42 Download gff for FI08810.complete
Subject Subject Range Query Range Percent Splice Strand
3R 24815713..24815954 1..242 100 -> Plus
3R 24816449..24817213 243..1007 100   Plus

FI08810.pep Sequence

Translation from 55 to 951

> FI08810.pep
MLRKQARQRREYLYNKALTERLKSKQKIQETVVKSINENKAIGSKNVKKS
LTAYKSLKYADEGVDDRTVNDEYHYAGCEDPKIMLTTSHNPSSRLKMFMK
ELRLIIPNAQQMNRGNYQLTTLMHACRANNVTDFLIVHEHRGIPDSLVVC
HLPYGPTAFFNISDVVMRHDIPDIGHMSEQKPHLIFNNFKTPIGLRTVKI
LKHLFPVPKENSQRVMSFLNHNDSIIFRHHQYKYVNKELELTEVGPRFSL
KLYQIKLGTLENIKAADTEWINRPYMNTSQKRLIFSNDPGIINKDTEA*

FI08810.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 17:19:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF17886-PA 298 GF17886-PA 1..298 1..298 1509 92.3 Plus
Dana\GF23434-PA 389 GF23434-PA 179..389 80..285 330 34.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 17:19:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG11358-PA 298 GG11358-PA 1..298 1..298 1593 98.7 Plus
Dere\GG10274-PA 394 GG10274-PA 178..394 74..285 330 34.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 17:19:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH18024-PA 298 GH18024-PA 1..295 1..294 1133 70.8 Plus
Dgri\GH10194-PA 400 GH10194-PA 190..400 80..285 324 35.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:11:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG11920-PA 298 CG11920-PA 1..298 1..298 1563 100 Plus
CG6712-PA 394 CG6712-PA 106..391 7..282 335 32.3 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 17:19:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI16926-PA 218 GI16926-PA 1..215 80..294 963 80.5 Plus
Dmoj\GI14801-PA 407 GI14801-PA 197..407 80..285 328 35.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 17:19:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL21897-PA 293 GL21897-PA 1..293 1..293 1329 81.2 Plus
Dper\GL14129-PA 398 GL14129-PA 182..398 74..285 325 33.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 17:19:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA22540-PA 293 GA22540-PA 1..293 1..293 1327 80.9 Plus
Dpse\GA19804-PA 396 GA19804-PA 180..396 74..285 325 33.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 17:19:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM17799-PA 298 GM17799-PA 1..298 1..298 1604 99.7 Plus
Dsec\GM26329-PA 392 GM26329-PA 182..392 80..285 334 35.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 17:19:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD21170-PA 298 GD21170-PA 1..298 1..298 1603 99.3 Plus
Dsim\GD22130-PA 392 GD22130-PA 182..392 80..285 336 35.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 17:19:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ23618-PA 297 GJ23618-PA 1..296 1..295 1142 69.4 Plus
Dvir\GJ20668-PA 395 GJ20668-PA 185..395 80..285 322 34.9 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 17:19:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK12239-PA 306 GK12239-PA 1..271 1..271 1207 80.1 Plus
Dwil\GK19236-PA 154 GK19236-PA 1..152 145..296 673 80.9 Plus
Dwil\GK21080-PA 392 GK21080-PA 182..392 80..285 326 35.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 17:19:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE23555-PA 298 GE23555-PA 1..298 1..298 1597 99 Plus
Dyak\GE12424-PA 393 GE12424-PA 183..393 80..285 330 35.4 Plus

FI08810.hyp Sequence

Translation from 55 to 951

> FI08810.hyp
MLRKQARQRREYLYNKALTERLKSKQKIQETVVKSINENKAIGSKNVKKS
LTAYKSLKYADEGVDDRTVNDEYHYAGCEDPKIMLTTSHNPSSRLKMFMK
ELRLIIPNAQQMNRGNYQLTTLMHACRANNVTDFLIVHEHRGIPDSLVVC
HLPYGPTAFFNISDVVMRHDIPDIGHMSEQKPHLIFNNFKTPIGLRTVKI
LKHLFPVPKENSQRVMSFLNHNDSIIFRHHQYKYVNKELELTEVGPRFSL
KLYQIKLGTLENIKAADTEWINRPYMNTSQKRLIFSNDPGIINKDTEA*

FI08810.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:43:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG11920-PA 298 CG11920-PA 1..298 1..298 1563 100 Plus
CG6712-PA 394 CG6712-PA 106..391 7..282 335 32.3 Plus