Clone FI08815 Report

Search the DGRC for FI08815

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:88
Well:15
Vector:pBS SK-
Associated Gene/TranscriptCG6479-RA
Protein status:FI08815.pep: gold
Sequenced Size:1882

Clone Sequence Records

FI08815.complete Sequence

1882 bp assembled on 2009-12-14

GenBank Submission: BT120059.1

> FI08815.complete
TGCTATCACTTACAAACAAGTTTTCCCGGCATTTTCGATCTATTCAGGTG
ATTTTCTAATAATTATCACATAGTAGGCAATGAATTTTACACGGACTAAT
TGCTCGCCGCTGAGTAAAAACCCAGTGGTGCAGCGCAGCCTGGACTTGCG
ATTGCAGGGCGCCCAAGCGCGGCATTACCTCAAGTGGTGCTCCATAAATG
TGGTGCTGCTGTCGCTACTCCTCTTCGACCTCTGGCAGGCATGTCGGTCC
GCCTACAGGACCTACTGGTTCCTGGCGGAGTGCACCATTACGACCCTGAT
TGGCCTAAGTGCACTCGCCTGCTTCGGCAAGTATTTGTGGTTATGGTTTG
GTGGTGACCAAGTTACGGGTAGCGATATCCAAAAGTGGCTGCTTGATGGC
AAGGCAGAGAACTCTTTTCGTACAGTTTGCTCCCGAGCCGTGATGAAACC
ACGCAGCTACGAACCGGATAGCGATATAGAGGACGACATACCCATCATCA
ACTGGCACTCCTCCTTCGAGGACTCCTGCTGGGGCTCGCAATCCATGCGC
CGCAGCCCCAGTCCCACAAGGACGCCGCAGCAGACGAAACAAAACACCTC
TTACAACTCCTCGATGGTTCGAAACAACTCGCTGAATGCCAGCAATCTGA
GCAACGAGTCTACCTATATGTCCCCGTATGCGGAGGTGCGACGCGATGAC
TTCATGACCGATACACGAAAGTTGACCAGTCTAATGAAGCAGGCGGATCG
GGAGCGCAGCATGATGGACAGCTCGGATACACCCAATGTGCAGAGCATGG
GATCGGCCAACTCCTTCTGGAACTACTGCAACAATGCGGCCTATATGCTC
AAGACCACCATCTATCAACTATCGCCACCTCCGGCTGTTTCTACGGAAAA
TGCTCCCACCTCGATTGAGGAGTTTGGCGGTATTCAGTTTAGGGACAGCA
ATTCGGAGGTCATCAAGCGCATATCCACGGACAAACTGTCGCAATATGTG
GCCAACCTAAGATTTTGGATTTCTACGACCATACTTCAGCGTTTGGTCAA
AGAGATCAATTATGTGGACGATGTTTTCCGCCAGCGAGCTCTGATTGACA
TTAAAATTGGATCTGTGAGTGTAGAGAGATTACGCAAAACAGCCGAGAAC
CAGCAGTTCGTGCAGACGTGTGCGCCCATGTTGCCCATGCTCTTACCTTT
CCTGGACACCTTCAGCAACCAGGAATACCTGGTGCAGCGCATCAAGGAGC
TTGCGCAGGGCTCTTGCATAGCTGACTACCGCTGGTACTCGGGCAAAACA
CACAACGGTCAGCAGCGGGACGAGCATTTGCCCACCGATGCAGCTATAAT
ATTCCATTTATTTTGCGTGTACTTGGATAGCCAGTTGATGCCGTTGCCGC
AGGGCGGCGGACGACCCTTTCACTCCCGCTACGTGTTAATTCGCGACGAG
AAGAGCTCGACCAAGGACGTGGTGAACGCAGTTCACAACAAGGCCCACTG
CGCCATTTTAAGTACCGGCAACCCACTTAACCCTAAATTTAACTTTATCA
GCGACAAAGAACTACACAACTGCGTCTACGATAGGAATAACCTGTTCTAC
GTTATCATACAGTTCCTAATTTATATGCGACAGCACCAGGACTCTGCTCT
GGAGTGCGTAAATCTTGGCAAGAGTGGTATCAACATCATGTGCGTCATCG
AAGACTGAACTGTGGATCTAGTCGGCCGTGGCTATGACTTTTAACCCGAC
CCCTAATCACTCGTTATTTCTAAGCATGATCCTTTGTGACTCGACTATCG
TTTGGTGACTGGACAATCCTCATCATTCGTTACTATGAAATTATACATTT
GTAATTATTAAGCCAAAAAAAAAAAAAAAAAA

FI08815.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:47:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG6479-RA 2022 CG6479-RA 16..1874 1..1866 9065 99.1 Plus
CG6479.a 2004 CG6479.a 420..1856 423..1866 6970 98.9 Plus
CG6479.b 1805 CG6479.b 684..1805 738..1866 5395 98.6 Plus
CG6479.b 1805 CG6479.b 1..685 1..685 3410 99.8 Plus
CG6479.a 2004 CG6479.a 16..422 1..407 2020 99.7 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 07:19:32
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 17327576..17328185 1015..406 3050 100 Minus
chr3L 24539361 chr3L 17326619..17327130 1864..1346 2380 97.7 Minus
chr3L 24539361 chr3L 17327190..17327519 1345..1016 1650 100 Minus
chr3L 24539361 chr3L 17328243..17328548 407..102 1530 100 Minus
chr3L 24539361 chr3L 17328604..17328705 102..1 495 99 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:21:22 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 07:19:30
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 17338129..17338738 1015..406 3050 100 Minus
3L 28110227 3L 17337170..17337683 1866..1346 2345 97.1 Minus
3L 28110227 3L 17337743..17338072 1345..1016 1650 100 Minus
3L 28110227 3L 17338796..17339101 407..102 1530 100 Minus
3L 28110227 3L 17339157..17339258 102..1 495 99 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:44:54
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 17331229..17331838 1015..406 3050 100 Minus
3L 28103327 3L 17330270..17330783 1866..1346 2355 97.1 Minus
3L 28103327 3L 17330843..17331172 1345..1016 1650 100 Minus
3L 28103327 3L 17331896..17332201 407..102 1530 100 Minus
3L 28103327 3L 17332257..17332358 102..1 495 99 Minus
Blast to na_te.dros performed on 2019-03-16 07:19:31 has no hits.

FI08815.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 07:20:25 Download gff for FI08815.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 17326619..17327130 1346..1864 97 <- Minus
chr3L 17327190..17327519 1016..1345 100 <- Minus
chr3L 17327576..17328183 408..1015 100 <- Minus
chr3L 17328243..17328547 103..407 100 <- Minus
chr3L 17328604..17328705 1..102 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-12-14 14:56:41 Download gff for FI08815.complete
Subject Subject Range Query Range Percent Splice Strand
CG6479-RA 1..1629 80..1708 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:29:32 Download gff for FI08815.complete
Subject Subject Range Query Range Percent Splice Strand
CG6479-RA 1..1629 80..1708 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 08:36:13 Download gff for FI08815.complete
Subject Subject Range Query Range Percent Splice Strand
CG6479-RA 1..1629 80..1708 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:30:02 Download gff for FI08815.complete
Subject Subject Range Query Range Percent Splice Strand
CG6479-RA 1..1629 80..1708 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-12-14 14:56:39 Download gff for FI08815.complete
Subject Subject Range Query Range Percent Splice Strand
CG6479-RA 1..1857 1..1864 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:29:32 Download gff for FI08815.complete
Subject Subject Range Query Range Percent Splice Strand
CG6479-RA 1..1857 1..1864 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:36:13 Download gff for FI08815.complete
Subject Subject Range Query Range Percent Splice Strand
CG6479-RA 5..1861 1..1864 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:30:02 Download gff for FI08815.complete
Subject Subject Range Query Range Percent Splice Strand
CG6479-RA 5..1861 1..1864 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:20:25 Download gff for FI08815.complete
Subject Subject Range Query Range Percent Splice Strand
3L 17337172..17337683 1346..1864 97 <- Minus
3L 17337743..17338072 1016..1345 100 <- Minus
3L 17338129..17338736 408..1015 100 <- Minus
3L 17338796..17339100 103..407 100 <- Minus
3L 17339157..17339258 1..102 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:20:25 Download gff for FI08815.complete
Subject Subject Range Query Range Percent Splice Strand
3L 17337172..17337683 1346..1864 97 <- Minus
3L 17337743..17338072 1016..1345 100 <- Minus
3L 17338129..17338736 408..1015 100 <- Minus
3L 17338796..17339100 103..407 100 <- Minus
3L 17339157..17339258 1..102 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:20:25 Download gff for FI08815.complete
Subject Subject Range Query Range Percent Splice Strand
3L 17337172..17337683 1346..1864 97 <- Minus
3L 17337743..17338072 1016..1345 100 <- Minus
3L 17338129..17338736 408..1015 100 <- Minus
3L 17338796..17339100 103..407 100 <- Minus
3L 17339157..17339258 1..102 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:36:13 Download gff for FI08815.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 17332257..17332358 1..102 99   Minus
arm_3L 17331896..17332200 103..407 100 <- Minus
arm_3L 17330272..17330783 1346..1864 97 <- Minus
arm_3L 17330843..17331172 1016..1345 100 <- Minus
arm_3L 17331229..17331836 408..1015 100 <- Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:15:04 Download gff for FI08815.complete
Subject Subject Range Query Range Percent Splice Strand
3L 17330272..17330783 1346..1864 97 <- Minus
3L 17330843..17331172 1016..1345 100 <- Minus
3L 17331229..17331836 408..1015 100 <- Minus
3L 17331896..17332200 103..407 100 <- Minus
3L 17332257..17332358 1..102 99   Minus

FI08815.hyp Sequence

Translation from 79 to 1707

> FI08815.hyp
MNFTRTNCSPLSKNPVVQRSLDLRLQGAQARHYLKWCSINVVLLSLLLFD
LWQACRSAYRTYWFLAECTITTLIGLSALACFGKYLWLWFGGDQVTGSDI
QKWLLDGKAENSFRTVCSRAVMKPRSYEPDSDIEDDIPIINWHSSFEDSC
WGSQSMRRSPSPTRTPQQTKQNTSYNSSMVRNNSLNASNLSNESTYMSPY
AEVRRDDFMTDTRKLTSLMKQADRERSMMDSSDTPNVQSMGSANSFWNYC
NNAAYMLKTTIYQLSPPPAVSTENAPTSIEEFGGIQFRDSNSEVIKRIST
DKLSQYVANLRFWISTTILQRLVKEINYVDDVFRQRALIDIKIGSVSVER
LRKTAENQQFVQTCAPMLPMLLPFLDTFSNQEYLVQRIKELAQGSCIADY
RWYSGKTHNGQQRDEHLPTDAAIIFHLFCVYLDSQLMPLPQGGGRPFHSR
YVLIRDEKSSTKDVVNAVHNKAHCAILSTGNPLNPKFNFISDKELHNCVY
DRNNLFYVIIQFLIYMRQHQDSALECVNLGKSGINIMCVIED*

FI08815.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:43:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG6479-PA 542 CG6479-PA 1..542 1..542 2870 100 Plus
CG6479-PB 538 CG6479-PB 5..538 9..542 2823 100 Plus
CG6479-PC 536 CG6479-PC 1..536 1..542 2822 98.9 Plus

FI08815.pep Sequence

Translation from 79 to 1707

> FI08815.pep
MNFTRTNCSPLSKNPVVQRSLDLRLQGAQARHYLKWCSINVVLLSLLLFD
LWQACRSAYRTYWFLAECTITTLIGLSALACFGKYLWLWFGGDQVTGSDI
QKWLLDGKAENSFRTVCSRAVMKPRSYEPDSDIEDDIPIINWHSSFEDSC
WGSQSMRRSPSPTRTPQQTKQNTSYNSSMVRNNSLNASNLSNESTYMSPY
AEVRRDDFMTDTRKLTSLMKQADRERSMMDSSDTPNVQSMGSANSFWNYC
NNAAYMLKTTIYQLSPPPAVSTENAPTSIEEFGGIQFRDSNSEVIKRIST
DKLSQYVANLRFWISTTILQRLVKEINYVDDVFRQRALIDIKIGSVSVER
LRKTAENQQFVQTCAPMLPMLLPFLDTFSNQEYLVQRIKELAQGSCIADY
RWYSGKTHNGQQRDEHLPTDAAIIFHLFCVYLDSQLMPLPQGGGRPFHSR
YVLIRDEKSSTKDVVNAVHNKAHCAILSTGNPLNPKFNFISDKELHNCVY
DRNNLFYVIIQFLIYMRQHQDSALECVNLGKSGINIMCVIED*

FI08815.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 20:15:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF24321-PA 545 GF24321-PA 1..545 1..542 2416 83.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 20:15:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG15823-PA 542 GG15823-PA 1..542 1..542 2786 94.1 Plus
Dere\GG15122-PA 402 GG15122-PA 140..392 282..542 723 57.4 Plus
Dere\GG15122-PA 402 GG15122-PA 1..139 1..146 275 47.7 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 20:15:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH14916-PA 931 GH14916-PA 375..931 9..542 1799 67 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:04:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG6479-PA 542 CG6479-PA 1..542 1..542 2870 100 Plus
CG6479-PB 538 CG6479-PB 5..538 9..542 2823 100 Plus
CG6479-PC 536 CG6479-PC 1..536 1..542 2822 98.9 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 20:15:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI12895-PA 608 GI12895-PA 44..608 17..542 1759 60.7 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 20:15:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL15495-PA 535 GL15495-PA 1..535 1..542 2175 74.5 Plus
Dper\GL19039-PA 472 GL19039-PA 1..472 1..542 1081 48.4 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 20:15:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA23842-PA 535 GA23842-PA 1..535 1..542 2172 74.5 Plus
Dpse\GA25319-PA 500 GA25319-PA 1..500 1..542 1204 51.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 20:15:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM24343-PA 542 GM24343-PA 1..542 1..542 2863 97.4 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 20:15:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD12417-PA 515 GD12417-PA 1..515 1..542 2688 92.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 20:15:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ13037-PA 550 GJ13037-PA 17..550 28..542 1846 68.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 20:15:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK20346-PA 539 GK20346-PA 1..539 1..542 2084 71.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 20:15:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE22163-PA 542 GE22163-PA 1..542 1..542 2784 94.3 Plus
Dyak\GE21349-PA 204 GE21349-PA 2..188 351..540 540 55.7 Plus