Clone FI09243 Report

Search the DGRC for FI09243

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:92
Well:43
Vector:pFlc-1
Associated Gene/TranscriptListericin-RA
Protein status:FI09243.pep: gold
Sequenced Size:471

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG9080 2008-08-15 Release 5.9 accounting
CG9080 2008-12-18 5.12 accounting

Clone Sequence Records

FI09243.complete Sequence

471 bp assembled on 2008-07-25

GenBank Submission: BT032676

> FI09243.complete
ACCAGGATTGCAGAAAGTGTTTGATCGTCCAATATGAAACAGTACCTGGT
GCTTGCCCTCGTCTTTGCGGCCATTCTGGCCATGATCAGCGGCCATCCTC
TGGAGGAACAAAAGATCACGCTGGAAGATGCTGAAGCACAGCCGGGAATC
GATGATGGCACTGGAGTTAGGGCCGCTCGTCACTTTGGCGGCGGCTTTGG
CCGCGGAGGATATTGCTGTGGAGGAGGCGGTGGCTTCCGGCGCGGTGGTT
TCGGTGGCGGTGGTTACGGTGGCGGTGGTTACGGTGGCGGTGGCTATCCA
GGTGGCGGCTTTGGCGGATATCCCAGAGGTGGATTTGGCGGCGGCAGTGC
ATCAGCATCGGCGTCAGCTTCAGCCAGTTCCAGTTGGGGACGTAAATAAA
AATAGTTAATCACTGTAATTGAGGCGAAAATAGAAAAAAGTCAAAAAATG
AAAGCAAAAAAAAAAAAAAAA

FI09243.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:02:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG9080-RA 451 CG9080-RA 2..449 6..453 2240 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 09:46:09
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 7129212..7129644 453..6 1965 96.4 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:21:48 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 09:46:07
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 11241740..11242194 460..6 2260 99.8 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:20:36
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 11242939..11243393 460..6 2260 99.7 Minus
Blast to na_te.dros performed 2019-03-16 09:46:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\Tom 7060 Dana\Tom DNTOMRETA 7060bp Derived from Z24451 (Rel. 44, Last updated, Version 6). 780..840 394..454 107 63.9 Plus

FI09243.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 09:47:01 Download gff for FI09243.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 7129210..7129347 318..455 99 == Minus
chr2R 7129464..7129645 1..186 97   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 15:59:59 Download gff for FI09243.complete
Subject Subject Range Query Range Percent Splice Strand
CG9080-RA 1..366 34..399 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:02:38 Download gff for FI09243.complete
Subject Subject Range Query Range Percent Splice Strand
Listericin-RA 1..366 34..399 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 08:05:23 Download gff for FI09243.complete
Subject Subject Range Query Range Percent Splice Strand
Listericin-RA 1..366 34..399 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-22 00:51:31 Download gff for FI09243.complete
Subject Subject Range Query Range Percent Splice Strand
CG9080-RA 1..366 34..399 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:19:51 Download gff for FI09243.complete
Subject Subject Range Query Range Percent Splice Strand
Listericin-RA 1..366 34..399 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:21:54 Download gff for FI09243.complete
Subject Subject Range Query Range Percent Splice Strand
CG9080-RA 2..451 6..455 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:02:37 Download gff for FI09243.complete
Subject Subject Range Query Range Percent Splice Strand
Listericin-RA 2..451 6..455 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:05:23 Download gff for FI09243.complete
Subject Subject Range Query Range Percent Splice Strand
Listericin-RA 1..450 6..455 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-25 13:46:01 Download gff for FI09243.complete
Subject Subject Range Query Range Percent Splice Strand
CG9080-RA 2..451 6..455 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:19:51 Download gff for FI09243.complete
Subject Subject Range Query Range Percent Splice Strand
Listericin-RA 1..450 6..455 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:47:01 Download gff for FI09243.complete
Subject Subject Range Query Range Percent Splice Strand
2R 11241745..11242195 1..455 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:47:01 Download gff for FI09243.complete
Subject Subject Range Query Range Percent Splice Strand
2R 11241745..11242195 1..455 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 09:47:01 Download gff for FI09243.complete
Subject Subject Range Query Range Percent Splice Strand
2R 11241745..11242195 1..455 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:05:23 Download gff for FI09243.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 7129250..7129700 1..455 98   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:30:26 Download gff for FI09243.complete
Subject Subject Range Query Range Percent Splice Strand
2R 11242944..11243394 1..455 98   Minus

FI09243.pep Sequence

Translation from 33 to 398

> FI09243.pep
MKQYLVLALVFAAILAMISGHPLEEQKITLEDAEAQPGIDDGTGVRAARH
FGGGFGRGGYCCGGGGGFRRGGFGGGGYGGGGYGGGGYPGGGFGGYPRGG
FGGGSASASASASASSSWGRK*

FI09243.pep Blast Records

Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 17:40:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG22688-PA 113 GG22688-PA 1..50 1..50 240 88 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:11:22
Subject Length Description Subject Range Query Range Score Percent Strand
Listericin-PA 121 CG9080-PA 1..121 1..121 660 100 Plus
CG9757-PB 127 CG9757-PB 1..109 1..103 201 47.7 Plus
CG9757-PA 127 CG9757-PA 1..109 1..103 201 47.7 Plus
CG7294-PA 127 CG7294-PA 1..105 1..119 198 44.4 Plus
CG17108-PA 342 CG17108-PA 250..339 37..119 191 54.2 Plus
TwdlT-PA 286 CG5812-PA 51..128 38..111 184 53.8 Plus
CG14191-PA 193 CG14191-PA 21..75 52..105 170 60.3 Plus
CG9877-PA 88 CG9877-PA 26..84 55..119 169 61.5 Plus
TwdlT-PA 286 CG5812-PA 47..108 38..104 166 56.7 Plus
CG17108-PA 342 CG17108-PA 127..202 38..115 165 51.9 Plus
TwdlT-PA 286 CG5812-PA 25..119 36..119 164 45.3 Plus
CG7296-PB 161 CG7296-PB 41..142 36..119 161 49 Plus
CG7296-PA 161 CG7296-PA 41..142 36..119 161 49 Plus
CG14191-PA 193 CG14191-PA 102..182 52..118 160 44.6 Plus
CG14191-PA 193 CG14191-PA 46..123 51..119 158 44.4 Plus
Cpr47Ef-PC 612 CG13214-PC 367..469 33..119 158 43.7 Plus
CG5172-PC 106 CG5172-PC 24..98 52..116 157 49.3 Plus
CG13217-PA 113 CG13217-PA 2..100 3..95 157 43 Plus
CG7299-PC 177 CG7299-PC 1..162 1..119 156 35 Plus
CG7299-PA 177 CG7299-PA 1..162 1..119 156 35 Plus
Fib-PA 344 CG9888-PA 44..108 42..104 156 60.3 Plus
Edg91-PB 151 CG7539-PB 35..111 38..105 155 46.8 Plus
Edg91-PA 159 CG7539-PA 43..119 38..105 155 46.8 Plus
CG17108-PA 342 CG17108-PA 86..157 42..113 154 52.7 Plus
CG7296-PB 161 CG7296-PB 65..157 36..119 154 45.2 Plus
CG7296-PA 161 CG7296-PA 65..157 36..119 154 45.2 Plus
CG5172-PD 172 CG5172-PD 45..137 38..118 154 44.2 Plus
CG34327-PA 220 CG34327-PA 59..125 56..118 154 49.3 Plus
Nopp140-PA 720 CG7421-PA 649..709 52..114 154 57.1 Plus
Nopp140-PE 773 CG7421-PE 702..762 52..114 154 57.1 Plus
CG17108-PA 342 CG17108-PA 179..262 42..119 153 41.7 Plus
CG14191-PA 193 CG14191-PA 53..135 52..119 153 43.7 Plus
CG5172-PD 172 CG5172-PD 24..94 52..104 153 49.3 Plus
Nopp140-PA 720 CG7421-PA 620..694 38..104 153 55.7 Plus
Nopp140-PE 773 CG7421-PE 673..747 38..104 153 55.7 Plus
Cpr47Ef-PD 601 CG13214-PD 367..469 33..119 152 42.7 Plus
bel-PA 798 CG9748-PA 689..792 30..112 152 44.3 Plus
bel-PB 801 CG9748-PB 689..795 30..112 152 45 Plus
Fib-PA 344 CG9888-PA 10..72 53..119 150 52.2 Plus
Cpr47Ef-PC 612 CG13214-PC 364..440 33..119 150 48.3 Plus
CG15597-PB 149 CG15597-PB 28..102 52..105 150 48.7 Plus
Cpr47Ef-PD 601 CG13214-PD 364..440 33..119 150 48.3 Plus
CG17108-PA 342 CG17108-PA 204..337 44..119 149 39.6 Plus
Cpr47Ef-PC 612 CG13214-PC 1..92 7..105 149 41.5 Plus
Cpr47Ef-PC 612 CG13214-PC 295..380 38..119 149 44.9 Plus
Cpr47Ef-PD 601 CG13214-PD 1..92 7..105 149 41.5 Plus
Cpr47Ef-PD 601 CG13214-PD 295..380 38..119 149 44.9 Plus
Pex13-PA 440 CG4663-PA 73..132 51..104 149 55 Plus
CG7294-PA 127 CG7294-PA 54..123 51..119 148 51.4 Plus
Cpr47Ef-PC 612 CG13214-PC 248..331 42..119 148 47.6 Plus
CG5778-PC 117 CG5778-PC 30..110 34..100 148 45.7 Plus
CG5778-PA 117 CG5778-PA 30..110 34..100 148 45.7 Plus
Cpr47Ef-PD 601 CG13214-PD 248..331 42..119 148 47.6 Plus
Fib-PA 344 CG9888-PA 27..106 42..121 147 46.2 Plus
Cpr47Ef-PC 612 CG13214-PC 46..117 42..108 147 52.1 Plus
Cpr47Ef-PC 612 CG13214-PC 235..309 52..119 147 48 Plus
Cpr47Ef-PD 601 CG13214-PD 46..117 42..108 147 52.1 Plus
Cpr47Ef-PD 601 CG13214-PD 235..309 52..119 147 48 Plus
CG17108-PA 342 CG17108-PA 156..238 42..119 146 40.7 Plus
Cpr47Ef-PC 612 CG13214-PC 394..499 33..119 146 40.6 Plus
CG13376-PC 193 CG13376-PC 53..154 36..119 146 40.8 Plus
CG13376-PB 200 CG13376-PB 60..161 36..119 146 40.8 Plus
CG13376-PD 204 CG13376-PD 64..165 36..119 146 40.8 Plus
caz-PD 355 CG3606-PD 169..235 52..118 146 52.9 Plus
caz-PC 384 CG3606-PC 198..264 52..118 146 52.9 Plus
caz-PB 399 CG3606-PB 213..279 52..118 146 52.9 Plus
Fib-PA 344 CG9888-PA 3..93 36..120 145 45.2 Plus
CG11458-PA 98 CG11458-PA 40..95 52..104 145 58.9 Plus
CG5172-PC 106 CG5172-PC 21..74 59..105 144 59.3 Plus
CG5172-PD 172 CG5172-PD 21..74 59..105 144 59.3 Plus
Cpr47Ef-PC 612 CG13214-PC 278..377 42..119 144 39.6 Plus
Cpr47Ef-PD 601 CG13214-PD 278..377 42..119 144 39.6 Plus
Cpr47Ef-PC 612 CG13214-PC 321..403 52..119 143 45.9 Plus
CG15597-PB 149 CG15597-PB 71..143 52..105 143 46.7 Plus
CG11458-PA 98 CG11458-PA 25..86 52..104 143 51.6 Plus
Cpr47Ef-PD 601 CG13214-PD 321..403 52..119 143 45.9 Plus
CG10918-PA 183 CG10918-PA 20..79 52..104 143 58.1 Plus
CG17108-PA 342 CG17108-PA 54..138 42..119 142 42.4 Plus
CG17105-PB 103 CG17105-PB 1..93 1..116 142 43.7 Plus
CG17105-PA 103 CG17105-PA 1..93 1..116 142 43.7 Plus
CG8157-PB 113 CG8157-PB 41..95 51..104 141 60 Plus
CG8157-PA 113 CG8157-PA 41..95 51..104 141 60 Plus
CG4038-PA 237 CG4038-PA 8..64 42..99 141 56.9 Plus
CG5172-PD 172 CG5172-PD 90..152 52..104 136 48.5 Plus
CG10598-PC 173 CG10598-PC 55..116 52..112 136 54.7 Plus
CG10598-PA 173 CG10598-PA 55..116 52..112 136 54.7 Plus
CG8157-PB 113 CG8157-PB 26..82 53..104 134 62.7 Plus
CG8157-PA 113 CG8157-PA 26..82 53..104 134 62.7 Plus
CG14742-PA 74 CG14742-PA 7..74 52..121 133 47.1 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 17:40:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM20465-PA 103 GM20465-PA 1..53 1..53 274 96.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 17:40:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD25934-PA 103 GD25934-PA 1..53 1..53 274 98.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 17:40:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE13042-PA 125 GE13042-PA 10..54 6..50 189 73.3 Plus

FI09243.hyp Sequence

Translation from 33 to 398

> FI09243.hyp
MKQYLVLALVFAAILAMISGHPLEEQKITLEDAEAQPGIDDGTGVRAARH
FGGGFGRGGYCCGGGGGFRRGGFGGGGYGGGGYGGGGYPGGGFGGYPRGG
FGGGSASASASASASSSWGRK*

FI09243.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:46:09
Subject Length Description Subject Range Query Range Score Percent Strand
Listericin-PA 121 CG9080-PA 1..121 1..121 660 100 Plus
CG9757-PB 127 CG9757-PB 1..109 1..103 201 47.7 Plus
CG9757-PA 127 CG9757-PA 1..109 1..103 201 47.7 Plus
CG7294-PA 127 CG7294-PA 1..105 1..119 198 44.4 Plus
CG17108-PA 342 CG17108-PA 250..339 37..119 191 54.2 Plus
CG7294-PA 127 CG7294-PA 54..123 51..119 148 51.4 Plus