Clone FI09306 Report

Search the DGRC for FI09306

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:93
Well:6
Vector:pFlc-1
Associated Gene/TranscriptImpL3-RA
Protein status:FI09306.pep: gold
Sequenced Size:1408

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
ImpL3 2008-12-18 5.12 accounting

Clone Sequence Records

FI09306.complete Sequence

1408 bp assembled on 2008-09-15

GenBank Submission: BT044524.1

> FI09306.complete
AATGGCAGTCCGCTTGAAGTGCAAACAGTTCGCAACGAACGCGCAAAGTG
AACGGAACGTCGACGACCTCAAAGTTTAGAGGCGCCCAAAATAATCCAGT
GAAAAAAAAAGAGAATTAAAACAAAACCAATACAAAACAATGGCCGCCAT
TAAGGACAGTCTGTTGGCCCAGGTTGCTGAGGTCCTGCCCAGCTCCGGGC
ACAAGGTCACCATTGTGGGCATCGGCCAGGTGGGCATGGCCAGCGCCTTC
AGCATCCTGGCTCAGAACGTCTCCAAGGAGGTGTGCCTCATCGATGTCTG
CGCGGACAAGCTGCAGGGCGAGCTGATGGATCTGCAGCACGGCTCCAACT
TTCTGAAGAACCCCCAGATCACGGCCAGCACCGACTTTGCCGCCTCGGCC
AACTCCCGTCTGTGCATCGTGACCGCCGGAGTGCGCCAAAAGGAGGGCGA
GTCCCGCCTGTCCCTCGTGCAGCGCAACACCGACATCCTCAAGAACATCA
TCCCCAAGCTGGTAGAGTACAGTCCCGATACCATTTTGCTTATGGTGTCC
AATCCCGTGGACATCATGACCTACGTGGCCTGGAAGCTGTCCGGTCTGCC
CAAGAACCGCGTGATCGGCAGCGGCACCAACTTGGACTCGTCCCGCTTCC
GCTTCCTGATGTCGCAGCGCCTGGGCGTGGCACCCACCTCCTGCCACGGC
TGGATCATCGGTGAGCACGGCGACAGCTCCGTGCCCGTTTGGTCTGGAGT
GAACATTGCCGGCGTGCGTTTGCGCGAGCTGAACCCCATTCTGGGCACCG
GCGAGGATCCAGAGAAGTGGAACGAGCTGCACAAGCAGGTGGTGGACTCC
GCCTACGAGGTGATCAAGCTAAAGGGATACACCTCCTGGGCCATTGGCCT
GAGCACCGCCTCCCTGGCCTCGGCCATCTTGCGCAACACGAGCAGCGTGG
CCGCCGTCTCCACCTCCGTTTTGGGCGAACATGGCATTGACAAGGATGTG
TTCCTCTCGCTGCCCTGCGTTCTCAATGCCAACGGTGTGACATCCGTGGT
CAAGCAGATCCTGACTCCCACCGAAGTTGAACAACTGCAGAAGTCCGCCA
ACATCATGTCCGATGTCCAGGCTGGTCTGAAGTTCTAAATCAAAGCATTC
AACTAACAGATCCATTCGCAACACCCAAAAAGAAAACAACACACAAAACA
GAGCGGAATGCTAATTTTAGTCCAATTTGGAGCAGCAGGGGAGCAGAAGC
CAGTGAAAAGATGCCACGGATCGTAGCATCAAGTATTTCTGACTACCAAT
GTTTATTTTTAGTCCACCTCTCAATTTATTTATTATTTTTATGAATTAGT
TCTTGTGTGCCCACACGAATAAACTGTTTAAATTTTAAGTCTAAAAAAAA
AAAAAAAA

FI09306.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:06:23
Subject Length Description Subject Range Query Range Score Percent Strand
ImpL3.b 1778 ImpL3.b 4..1393 5..1394 6935 99.9 Plus
ImpL3-RA 1636 ImpL3-RA 157..1546 5..1394 6935 99.9 Plus
ImpL3.a 1377 ImpL3.a 70..1326 138..1394 6270 99.9 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 06:00:22
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 6252471..6252929 974..516 2295 100 Minus
chr3L 24539361 chr3L 6251985..6252402 1390..973 2075 99.8 Minus
chr3L 24539361 chr3L 6252996..6253375 517..138 1840 98.9 Minus
chr3L 24539361 chr3L 6255050..6255182 137..5 650 99.2 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:21:50 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 06:00:20
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 6259980..6260438 974..516 2295 100 Minus
3L 28110227 3L 6259490..6259911 1394..973 2095 99.8 Minus
3L 28110227 3L 6260505..6260884 517..138 1900 100 Minus
3L 28110227 3L 6262559..6262691 137..5 665 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:24:37
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 6253080..6253538 974..516 2295 100 Minus
3L 28103327 3L 6252590..6253011 1394..973 2095 99.7 Minus
3L 28103327 3L 6253605..6253984 517..138 1900 100 Minus
3L 28103327 3L 6255659..6255791 137..5 665 100 Minus
Blast to na_te.dros performed on 2019-03-16 06:00:21 has no hits.

FI09306.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 06:01:12 Download gff for FI09306.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 6251983..6252401 974..1392 99 <- Minus
chr3L 6252472..6252927 518..973 100 <- Minus
chr3L 6252996..6253375 138..517 98 <- Minus
chr3L 6255050..6255184 1..137 97   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:00:00 Download gff for FI09306.complete
Subject Subject Range Query Range Percent Splice Strand
ImpL3-RA 1..999 140..1138 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:09:19 Download gff for FI09306.complete
Subject Subject Range Query Range Percent Splice Strand
ImpL3-RA 1..999 140..1138 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 09:56:08 Download gff for FI09306.complete
Subject Subject Range Query Range Percent Splice Strand
ImpL3-RB 1..999 140..1138 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:10:43 Download gff for FI09306.complete
Subject Subject Range Query Range Percent Splice Strand
ImpL3-RB 1..999 140..1138 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:48:26 Download gff for FI09306.complete
Subject Subject Range Query Range Percent Splice Strand
ImpL3-RA 3..1389 5..1392 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:09:18 Download gff for FI09306.complete
Subject Subject Range Query Range Percent Splice Strand
ImpL3-RA 3..1389 5..1392 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:56:08 Download gff for FI09306.complete
Subject Subject Range Query Range Percent Splice Strand
ImpL3-RA 1..1390 2..1392 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-09-15 12:13:17 Download gff for FI09306.complete
Subject Subject Range Query Range Percent Splice Strand
ImpL3-RA 3..1389 5..1392 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:10:43 Download gff for FI09306.complete
Subject Subject Range Query Range Percent Splice Strand
ImpL3-RA 1..1390 2..1392 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:01:12 Download gff for FI09306.complete
Subject Subject Range Query Range Percent Splice Strand
3L 6259492..6259910 974..1392 99 <- Minus
3L 6259981..6260436 518..973 100 <- Minus
3L 6260505..6260884 138..517 100 <- Minus
3L 6262559..6262693 1..137 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:01:12 Download gff for FI09306.complete
Subject Subject Range Query Range Percent Splice Strand
3L 6259492..6259910 974..1392 99 <- Minus
3L 6259981..6260436 518..973 100 <- Minus
3L 6260505..6260884 138..517 100 <- Minus
3L 6262559..6262693 1..137 98   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:01:12 Download gff for FI09306.complete
Subject Subject Range Query Range Percent Splice Strand
3L 6259492..6259910 974..1392 99 <- Minus
3L 6259981..6260436 518..973 100 <- Minus
3L 6260505..6260884 138..517 100 <- Minus
3L 6262559..6262693 1..137 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:56:08 Download gff for FI09306.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 6252592..6253010 974..1392 99 <- Minus
arm_3L 6253081..6253536 518..973 100 <- Minus
arm_3L 6253605..6253984 138..517 100 <- Minus
arm_3L 6255659..6255793 1..137 98   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:39:07 Download gff for FI09306.complete
Subject Subject Range Query Range Percent Splice Strand
3L 6252592..6253010 974..1392 99 <- Minus
3L 6253081..6253536 518..973 100 <- Minus
3L 6253605..6253984 138..517 100 <- Minus
3L 6255659..6255793 1..137 98   Minus

FI09306.pep Sequence

Translation from 139 to 1137

> FI09306.pep
MAAIKDSLLAQVAEVLPSSGHKVTIVGIGQVGMASAFSILAQNVSKEVCL
IDVCADKLQGELMDLQHGSNFLKNPQITASTDFAASANSRLCIVTAGVRQ
KEGESRLSLVQRNTDILKNIIPKLVEYSPDTILLMVSNPVDIMTYVAWKL
SGLPKNRVIGSGTNLDSSRFRFLMSQRLGVAPTSCHGWIIGEHGDSSVPV
WSGVNIAGVRLRELNPILGTGEDPEKWNELHKQVVDSAYEVIKLKGYTSW
AIGLSTASLASAILRNTSSVAAVSTSVLGEHGIDKDVFLSLPCVLNANGV
TSVVKQILTPTEVEQLQKSANIMSDVQAGLKF*

FI09306.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 12:41:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF10902-PA 332 GF10902-PA 1..332 1..332 1723 97.9 Plus
Dana\GF13705-PA 369 GF13705-PA 45..367 7..330 685 39.8 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 12:41:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG14061-PA 332 GG14061-PA 1..332 1..332 1741 99.4 Plus
Dere\GG20393-PA 361 GG20393-PA 36..359 8..330 653 39.2 Plus
Dere\GG22759-PA 336 GG22759-PA 25..299 21..300 164 25.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 12:41:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH16279-PA 332 GH16279-PA 1..332 1..332 1637 92.5 Plus
Dgri\GH18558-PA 336 GH18558-PA 25..299 21..300 151 26.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:05:56
Subject Length Description Subject Range Query Range Score Percent Strand
Ldh-PD 332 CG10160-PD 1..332 1..332 1668 100 Plus
Ldh-PC 332 CG10160-PC 1..332 1..332 1668 100 Plus
Ldh-PB 332 CG10160-PB 1..332 1..332 1668 100 Plus
Ldh-PA 332 CG10160-PA 1..332 1..332 1668 100 Plus
CG13334-PB 361 CG13334-PB 50..359 22..330 657 41 Plus
CG13334-PA 361 CG13334-PA 50..359 22..330 657 41 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 12:41:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI13222-PA 332 GI13222-PA 1..332 1..332 1685 95.8 Plus
Dmoj\GI18597-PA 382 GI18597-PA 37..313 21..300 159 24.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 12:41:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL22518-PA 500 GL22518-PA 295..500 127..332 1069 97.6 Plus
Dper\GL15337-PA 159 GL15337-PA 1..159 174..332 817 96.9 Plus
Dper\GL17466-PA 355 GL17466-PA 39..355 17..332 587 36.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 12:41:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA10121-PA 332 GA10121-PA 1..332 1..332 1718 97.9 Plus
Dpse\GA30454-PA 1525 GA30454-PA 462..773 20..331 736 43.3 Plus
Dpse\GA24202-PB 356 GA24202-PB 40..356 17..332 659 39.7 Plus
Dpse\GA20754-PA 336 GA20754-PA 93..299 89..300 151 26.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 12:41:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM13843-PA 332 GM13843-PA 1..332 1..332 1728 98.8 Plus
Dsec\GM21480-PA 338 GM21480-PA 27..336 22..330 676 41.6 Plus
Dsec\GM23427-PA 57 GM23427-PA 1..56 135..190 301 98.2 Plus
Dsec\GM15290-PA 336 GM15290-PA 25..299 21..300 163 25.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 12:41:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD13128-PA 332 GD13128-PA 1..332 1..332 1739 99.4 Plus
Dsim\GD10977-PA 338 GD10977-PA 27..336 22..330 675 41.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 12:41:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ11996-PA 332 GJ11996-PA 1..332 1..332 1688 95.5 Plus
Dvir\GJ21641-PA 343 GJ21641-PA 31..343 20..332 769 45 Plus
Dvir\GJ21640-PA 702 GJ21640-PA 390..702 20..332 750 43.5 Plus
Dvir\GJ17738-PA 330 GJ17738-PA 21..330 22..332 658 37.9 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 12:41:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK17340-PA 333 GK17340-PA 4..333 3..332 1699 97.6 Plus
Dwil\GK15970-PA 353 GK15970-PA 26..353 8..332 637 39.6 Plus
Dwil\GK22386-PA 336 GK22386-PA 25..299 21..300 166 26.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 12:41:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE20486-PA 332 GE20486-PA 1..332 1..332 1739 99.4 Plus
Dyak\GE12554-PA 338 GE12554-PA 27..338 22..332 660 40.4 Plus
Dyak\GE25523-PA 336 GE25523-PA 25..299 21..300 163 25.9 Plus

FI09306.hyp Sequence

Translation from 139 to 1137

> FI09306.hyp
MAAIKDSLLAQVAEVLPSSGHKVTIVGIGQVGMASAFSILAQNVSKEVCL
IDVCADKLQGELMDLQHGSNFLKNPQITASTDFAASANSRLCIVTAGVRQ
KEGESRLSLVQRNTDILKNIIPKLVEYSPDTILLMVSNPVDIMTYVAWKL
SGLPKNRVIGSGTNLDSSRFRFLMSQRLGVAPTSCHGWIIGEHGDSSVPV
WSGVNIAGVRLRELNPILGTGEDPEKWNELHKQVVDSAYEVIKLKGYTSW
AIGLSTASLASAILRNTSSVAAVSTSVLGEHGIDKDVFLSLPCVLNANGV
TSVVKQILTPTEVEQLQKSANIMSDVQAGLKF*

FI09306.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:46:14
Subject Length Description Subject Range Query Range Score Percent Strand
ImpL3-PD 332 CG10160-PD 1..332 1..332 1668 100 Plus
ImpL3-PC 332 CG10160-PC 1..332 1..332 1668 100 Plus
ImpL3-PB 332 CG10160-PB 1..332 1..332 1668 100 Plus
ImpL3-PA 332 CG10160-PA 1..332 1..332 1668 100 Plus
CG13334-PB 361 CG13334-PB 50..359 22..330 657 41 Plus