Clone FI09336 Report

Search the DGRC for FI09336

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:93
Well:36
Vector:pFlc-1
Associated Gene/TranscriptCG4788-RA
Protein status:FI09336.pep: gold
Sequenced Size:1406

Clone Sequence Records

FI09336.complete Sequence

1406 bp assembled on 2009-05-14

GenBank Submission: BT083448.1

> FI09336.complete
AACGCGTGGTTCACACTACAAAAAAAAAAGACAACGCTGAGTTTTTAACA
TTAAAAACGTTTTTTAAACCACTAAAACGAGAAAAATAAATAAAAAATAA
GTTTGTGCGTGATCGAAAAGCGTTGGCCGATTTGCAGAGGAGCAGGCAAT
TCACAATCAGCTGCCGTGAGAACTGTCGTATAGCCAAGACAATGCAGCAA
ACAAATCCGGCTTCTGGCGGGGATGCGCTGCTTCCATTGCGCACCTGCAA
CACCACCGGATGCAAAGTGGCCACTGTGGTGGAGAAGACGAAGAGGAAGT
GCTCCCAGTTCGTGTCCGCGCCGTACATAATGCCCAAGCCACTGGTAGTC
AATGGGCACACATCGATCTTTCAAGTGGGCGGCGAAATGGCCCATATGGG
CGACATTCCGGCGCTCTCGAAAATTAGTGATGGTGGACAGCTAGTATACC
GAATAAAGCCGGGCACCCATGCCCATGTCATCAACTATGTGATCATCGAC
GAGGGCTCCGACTCGCTGGAGAAGGCCAGATCCGGCGACCAGGAGGCCAT
GCGTCTGCTGCTGGAATCGCAACGTGACAGTGCTGCGTCCAAGCTACAAA
AGTTTTTAACCAACCATAAGGGAACTCCGCCATCGGGCTATATTTCATCG
CTAATACTATCACGGCCAGTGGCCAGCGTCTCAACGTCTGCGGGCACTCC
AGCGGCCACTGGCCATGTGACTACTCCTCAAATCCATCCGAACTTCTCCA
TCGCCAGCGTAGAGGGTGCAGTACCATTTAGACGCGCCGTTCCACCCTTG
GCGGTGAATCCTTCAGCTCCAGCTCCAGTTCCTTCAGGCCCTCTCCCAGC
TGTCAGTGCAGTTCAAGCTGACTCCGTGGATCGCCTTCAGGCGGAGCTTG
TCGAGTTGCGACGTACGGTGGCGCGCTTGGAGGAGAATAGTCGCCGCTAG
ATGACCGACTTCCCTTTGCGGAGGAATACTTTAGTTAAGCCAAAAACGCT
TGGGTCAACTACTACAGCGACCTACCCTAAATATAGTTAATCTAGGCCAA
TAAATTTAGTATAACAATATTGTGTGTTTCCTAAATGTATATCCACATAA
ATCTAAAGTTATTCAATAAAAAACTTATGAGAAGTGGGATTGCTTAGCTC
ATAATCATTTTAGATCGTTATCAACTTATGATCTGCTATATAAATTACAT
AGATGTTTTCAAACAATTAAGACTGGAAAAATACAAAATTGGTTAATGTT
TAAAGGAAGAATACTTCATCATCACCAATGCAGTTCTGTTTAGCAATGAT
AATCATTACCAAAGTTGAATTGAAATATGTTTAATAAAAATCTATCGGAA
AAATAAGATAAAAAATTGAATAAATAAATCTAATGAACCCAAAAAAAAAA
AAAAAA

FI09336.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:26:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG4788-RA 1396 CG4788-RA 1..1392 1..1392 6960 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 20:57:16
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 11177775..11179165 1..1390 6905 99.9 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:22:00 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 20:57:14
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 11179041..11180432 1..1392 6960 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:21:15
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 11179041..11180432 1..1392 6960 100 Plus
Blast to na_te.dros performed on 2019-03-15 20:57:15 has no hits.

FI09336.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 20:58:09 Download gff for FI09336.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 11177775..11179165 1..1390 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 17:53:53 Download gff for FI09336.complete
Subject Subject Range Query Range Percent Splice Strand
CG4788-RA 1..759 192..950 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 13:52:42 Download gff for FI09336.complete
Subject Subject Range Query Range Percent Splice Strand
CG4788-RA 1..759 192..950 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 05:32:36 Download gff for FI09336.complete
Subject Subject Range Query Range Percent Splice Strand
CG4788-RA 1..759 192..950 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:38:49 Download gff for FI09336.complete
Subject Subject Range Query Range Percent Splice Strand
CG4788-RA 1..759 192..950 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-15 08:56:43 Download gff for FI09336.complete
Subject Subject Range Query Range Percent Splice Strand
CG4788-RA 1..1390 1..1390 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 13:52:41 Download gff for FI09336.complete
Subject Subject Range Query Range Percent Splice Strand
CG4788-RA 1..1390 1..1390 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:32:36 Download gff for FI09336.complete
Subject Subject Range Query Range Percent Splice Strand
CG4788-RA 10..1399 1..1390 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:38:49 Download gff for FI09336.complete
Subject Subject Range Query Range Percent Splice Strand
CG4788-RA 10..1399 1..1390 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:58:09 Download gff for FI09336.complete
Subject Subject Range Query Range Percent Splice Strand
2L 11179041..11180430 1..1390 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:58:09 Download gff for FI09336.complete
Subject Subject Range Query Range Percent Splice Strand
2L 11179041..11180430 1..1390 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 20:58:09 Download gff for FI09336.complete
Subject Subject Range Query Range Percent Splice Strand
2L 11179041..11180430 1..1390 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:32:36 Download gff for FI09336.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 11179041..11180430 1..1390 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 11:43:31 Download gff for FI09336.complete
Subject Subject Range Query Range Percent Splice Strand
2L 11179041..11180430 1..1390 100   Plus

FI09336.hyp Sequence

Translation from 191 to 949

> FI09336.hyp
MQQTNPASGGDALLPLRTCNTTGCKVATVVEKTKRKCSQFVSAPYIMPKP
LVVNGHTSIFQVGGEMAHMGDIPALSKISDGGQLVYRIKPGTHAHVINYV
IIDEGSDSLEKARSGDQEAMRLLLESQRDSAASKLQKFLTNHKGTPPSGY
ISSLILSRPVASVSTSAGTPAATGHVTTPQIHPNFSIASVEGAVPFRRAV
PPLAVNPSAPAPVPSGPLPAVSAVQADSVDRLQAELVELRRTVARLEENS
RR*

FI09336.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:46:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG4788-PB 252 CG4788-PB 1..252 1..252 1278 100 Plus
CG4788-PA 252 CG4788-PA 1..252 1..252 1278 100 Plus

FI09336.pep Sequence

Translation from 191 to 949

> FI09336.pep
MQQTNPASGGDALLPLRTCNTTGCKVATVVEKTKRKCSQFVSAPYIMPKP
LVVNGHTSIFQVGGEMAHMGDIPALSKISDGGQLVYRIKPGTHAHVINYV
IIDEGSDSLEKARSGDQEAMRLLLESQRDSAASKLQKFLTNHKGTPPSGY
ISSLILSRPVASVSTSAGTPAATGHVTTPQIHPNFSIASVEGAVPFRRAV
PPLAVNPSAPAPVPSGPLPAVSAVQADSVDRLQAELVELRRTVARLEENS
RR*

FI09336.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 16:45:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF14764-PA 258 GF14764-PA 1..258 1..251 790 63.1 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 16:45:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG23711-PA 256 GG23711-PA 1..256 1..252 1065 84.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 16:45:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH13386-PA 304 GH13386-PA 24..159 14..144 511 68.4 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:37:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG4788-PB 252 CG4788-PB 1..252 1..252 1278 100 Plus
CG4788-PA 252 CG4788-PA 1..252 1..252 1278 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 16:45:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI20639-PA 280 GI20639-PA 23..273 15..246 641 56.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 16:45:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL19548-PA 260 GL19548-PA 18..260 4..252 642 57.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 16:45:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA18433-PA 264 GA18433-PA 18..264 4..252 627 55.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 16:45:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM18951-PA 256 GM18951-PA 1..256 1..252 1115 89.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 16:45:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD23769-PA 256 GD23769-PA 1..256 1..252 1109 89.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 16:45:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ13234-PA 266 GJ13234-PA 18..259 8..246 679 57.9 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 16:45:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK14897-PA 280 GK14897-PA 31..268 16..247 674 57.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 16:45:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE18518-PA 258 GE18518-PA 1..258 1..252 1101 84.1 Plus