Clone FI09407 Report

Search the DGRC for FI09407

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:94
Well:7
Vector:pFlc-1
Associated Gene/TranscriptCsas-RA
Protein status:FI09407.pep: gold
Sequenced Size:775

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
Csas 2008-08-15 Release 5.9 accounting
Csas 2008-12-18 5.12 accounting

Clone Sequence Records

FI09407.complete Sequence

775 bp assembled on 2008-08-14

GenBank Submission: BT044427.1

> FI09407.complete
GCTTCTACTAGTTTTTCTTTTCGAAACCGGGTGCACGGAAAATTGTCTGA
GCAACGATATTCATGCATTAATTTTGGCCAGGGGAGGCAGCAAAGGCATC
AAGCTGAAAAACCTGGCTGAAATTGGTGGCTCATCGCTTTTGGCCCGCAC
AATTATGACCATCAAAAATTCGACTTGCTTTCGACATATTTGGGTTTCCA
CAGATGACAAACGAATTGCCATTGAGGCACAAAAGTATGGTGCCATAATA
CATCATCGGCCTGAGAAATTCGCCAGAGACGACACTCCTTCACTTCATGC
CATTTCGGAGTTCCTAGATGTTCATAGAAGTATTCATGACTTTGCTCTAT
TCCAATGCACATCTGTATTCCTGAAAACCAAGTATATTCAAGAGGCTGTT
CGAAAGTTTGAGTCCCATGACTGTGTTTTTGCCGCTAAGAGATCACATTA
TCTGCGATGGAAGGTGGTCGATGGTGAATTGATGCCAGCGGAATTCGATT
TGAGTGCCAGGCCAAGACGCCAAGATTGGCAGGGTGATATTGTAGAGACA
GGAATGTTTTACTTCTCGAGGAGGAAACTGGTGGACAGTGGGCTACTGCA
AAACAATAGGTGCTCCGTTGTGGAAATCGATGCCAAGGATAGTCTGGAAA
TTGACTCTAGCCACGATCTGACTCTAGCCAAATACATCTTAAGTAGTGAA
ACAAAAACCGAGTTATAGAAATAGATATGCTATTCATCAAAGAAAGTGTA
AAGTTCATTGAAAAAAAAAAAAAAA

FI09407.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:06:11
Subject Length Description Subject Range Query Range Score Percent Strand
Csas-RA 810 Csas-RA 56..810 6..760 3775 100 Plus
schuy-RA 2003 schuy-RA 1957..2003 761..715 235 100 Minus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 16:45:35
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 19977345..19977665 760..440 1605 100 Minus
chr3L 24539361 chr3L 19977719..19977923 441..237 1025 100 Minus
chr3L 24539361 chr3L 19977980..19978171 236..45 960 100 Minus
chr3L 24539361 chr3L 19978223..19978262 45..6 200 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:22:04 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 16:45:33
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 19988026..19988347 761..440 1610 100 Minus
3L 28110227 3L 19988401..19988605 441..237 1025 100 Minus
3L 28110227 3L 19988662..19988853 236..45 960 100 Minus
3L 28110227 3L 19988905..19988944 45..6 200 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:24:24
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 19981126..19981447 761..440 1610 100 Minus
3L 28103327 3L 19981501..19981705 441..237 1025 100 Minus
3L 28103327 3L 19981762..19981953 236..45 960 100 Minus
3L 28103327 3L 19982005..19982044 45..6 200 100 Minus
Blast to na_te.dros performed on 2019-03-16 16:45:34 has no hits.

FI09407.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 16:46:44 Download gff for FI09407.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 19977719..19977923 237..441 100 <- Minus
chr3L 19977980..19978170 46..236 100 <- Minus
chr3L 19978223..19978264 1..45 93   Minus
chr3L 19977345..19977663 442..760 100 <- Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:00:15 Download gff for FI09407.complete
Subject Subject Range Query Range Percent Splice Strand
Csas-RA 1..564 155..718 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:09:00 Download gff for FI09407.complete
Subject Subject Range Query Range Percent Splice Strand
Csas-RA 1..564 155..718 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 16:44:27 Download gff for FI09407.complete
Subject Subject Range Query Range Percent Splice Strand
Csas-RA 1..564 155..718 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-09-08 12:19:04 Download gff for FI09407.complete
Subject Subject Range Query Range Percent Splice Strand
Csas-RA 1..564 155..718 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 12:40:34 Download gff for FI09407.complete
Subject Subject Range Query Range Percent Splice Strand
Csas-RA 1..564 155..718 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:36:11 Download gff for FI09407.complete
Subject Subject Range Query Range Percent Splice Strand
Csas-RA 1..673 46..718 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:08:59 Download gff for FI09407.complete
Subject Subject Range Query Range Percent Splice Strand
Csas-RA 1..758 3..760 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:44:27 Download gff for FI09407.complete
Subject Subject Range Query Range Percent Splice Strand
Csas-RA 1..758 3..760 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-14 16:06:17 Download gff for FI09407.complete
Subject Subject Range Query Range Percent Splice Strand
Csas-RA 1..673 46..718 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 12:40:34 Download gff for FI09407.complete
Subject Subject Range Query Range Percent Splice Strand
Csas-RA 1..758 3..760 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:46:44 Download gff for FI09407.complete
Subject Subject Range Query Range Percent Splice Strand
3L 19988027..19988345 442..760 100 <- Minus
3L 19988401..19988605 237..441 100 <- Minus
3L 19988662..19988852 46..236 100 <- Minus
3L 19988905..19988946 1..45 93   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:46:44 Download gff for FI09407.complete
Subject Subject Range Query Range Percent Splice Strand
3L 19988027..19988345 442..760 100 <- Minus
3L 19988401..19988605 237..441 100 <- Minus
3L 19988662..19988852 46..236 100 <- Minus
3L 19988905..19988946 1..45 93   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 16:46:44 Download gff for FI09407.complete
Subject Subject Range Query Range Percent Splice Strand
3L 19988027..19988345 442..760 100 <- Minus
3L 19988401..19988605 237..441 100 <- Minus
3L 19988662..19988852 46..236 100 <- Minus
3L 19988905..19988946 1..45 93   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:44:27 Download gff for FI09407.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 19981127..19981445 442..760 100 <- Minus
arm_3L 19981501..19981705 237..441 100 <- Minus
arm_3L 19981762..19981952 46..236 100 <- Minus
arm_3L 19982005..19982046 1..45 93   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:38:41 Download gff for FI09407.complete
Subject Subject Range Query Range Percent Splice Strand
3L 19981127..19981445 442..760 100 <- Minus
3L 19981501..19981705 237..441 100 <- Minus
3L 19981762..19981952 46..236 100 <- Minus
3L 19982005..19982046 1..45 93   Minus

FI09407.pep Sequence

Translation from 1 to 717

> FI09407.pep
LLLVFLFETGCTENCLSNDIHALILARGGSKGIKLKNLAEIGGSSLLART
IMTIKNSTCFRHIWVSTDDKRIAIEAQKYGAIIHHRPEKFARDDTPSLHA
ISEFLDVHRSIHDFALFQCTSVFLKTKYIQEAVRKFESHDCVFAAKRSHY
LRWKVVDGELMPAEFDLSARPRRQDWQGDIVETGMFYFSRRKLVDSGLLQ
NNRCSVVEIDAKDSLEIDSSHDLTLAKYILSSETKTEL*

FI09407.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 02:03:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF10834-PA 186 GF10834-PA 1..186 53..238 819 79 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 02:03:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG13354-PA 187 GG13354-PA 1..187 52..238 953 94.1 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 02:03:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH14727-PA 241 GH14727-PA 8..239 1..232 813 61.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:38:11
Subject Length Description Subject Range Query Range Score Percent Strand
Csas-PA 187 CG32220-PA 1..187 52..238 980 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 02:03:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI13380-PA 183 GI13380-PA 1..181 52..232 680 64.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 02:03:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL11892-PA 219 GL11892-PA 7..218 22..233 821 71.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 02:03:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA25514-PA 183 GA25514-PA 7..147 22..162 549 72.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 02:03:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM14951-PA 187 GM14951-PA 1..187 52..238 976 96.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 02:03:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD12235-PA 187 GD12235-PA 1..187 52..238 978 97.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 02:03:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ11503-PA 233 GJ11503-PA 16..231 17..232 786 65.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 02:03:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK20256-PA 199 GK20256-PA 1..180 52..231 650 63.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 02:03:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE22447-PA 187 GE22447-PA 1..187 52..238 944 93 Plus

FI09407.hyp Sequence

Translation from 3 to 717

> FI09407.hyp
LLVFLFETGCTENCLSNDIHALILARGGSKGIKLKNLAEIGGSSLLARTI
MTIKNSTCFRHIWVSTDDKRIAIEAQKYGAIIHHRPEKFARDDTPSLHAI
SEFLDVHRSIHDFALFQCTSVFLKTKYIQEAVRKFESHDCVFAAKRSHYL
RWKVVDGELMPAEFDLSARPRRQDWQGDIVETGMFYFSRRKLVDSGLLQN
NRCSVVEIDAKDSLEIDSSHDLTLAKYILSSETKTEL*

FI09407.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:47:07
Subject Length Description Subject Range Query Range Score Percent Strand
Csas-PA 187 CG32220-PA 1..187 51..237 980 100 Plus