Clone FI09421 Report

Search the DGRC for FI09421

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:94
Well:21
Vector:pFlc-1
Associated Gene/Transcriptltd-RD
Protein status:FI09421.pep: gold
Sequenced Size:1462

Clone Sequence Records

FI09421.complete Sequence

1462 bp assembled on 2009-05-14

GenBank Submission: BT083449.1

> FI09421.complete
AGTTGTAAACTGAAATTACTGGAGGTCGGACGTCTCGAGGCTCGGAATCA
CTGTTGTTGTTGTTTTGCGCCGTCTTGGCTCGTGTTGTTGTTGTCTTGCG
TAGTATTGCGTGCCTGGAAATCGAACGTGTGTGAATTTAATTTACGATTC
GTATAATTATCAGCAAGAGCAAACAATATAAGTTGCAAACGACCGTTTAA
GCCCTATGACACTAAGATCCAAAGCCATCATGACATCCACCAGCGATAAG
CGCGAGCATCTGTACAAGATTCTAGTCATTGGTGAACTGGGCACCGGCAA
GACGTCCTTCATTAAGCGCTATGTGCACCAGTTCTTCAGCCAGAACTACA
GGGCCACCATCGGCGTGGACTTCGCCCTGAAAGTGCTGCAGTGGGACGCC
AATACGATAGTGCGCCTCCAGCTGTGGGATATCGCCGGTCAGGAGAGGTT
TGGCAACATGACCCGTGTCTACTACAAGGAGGCGGTGGGCGCGTTCATCG
TTTTTGATGTGACTCGCAGTGGGACTTTCGATTGCGTGAGCAAGTGGAAG
GAAGATCTAGACTCCAAGGTGCAGCTGCCGGACGGCAGTCCCATTCCGTG
CATCCTGCTGGCCAATAAATGCGACCAGGAAAAGCAGGGCATCATAACGC
AGCCCGAGAAGATGGATGAGTATGTGAGGGAGAACGGATTTGCCGGTTGG
TTTGAGACATCCGCCAAGGAGAATATCAACATCGATGAGGCAGCTCGTGC
CCTCGTGAATAAGATACTCATCAACGATAAGCTGATATCTGCCGATCTGG
CCGATGGCGACAAGTTCAACTTGAGCGCGGCCGATGCAACCGGATCGGAT
GCCAAGAACAAGTGTTCCTGCTGACCTGGGACCGAGGTCCGGCGACTCCT
ATTCCCATTCCCAGTTTAAGAGCGAGTTTCAACACAGAAACGCCATGTGC
CTACGTCCACTCCATGTTCATGTTGTTAGAAGATAGCGATAACTATGCTT
AGGGTTTTAACGTAACATTTGTCTAAGACTTAGTGTCATCCGTATCATCC
CGTCCGTCTTTATCTTTAACACCCCGTCTGTGGGTCCACAATGTTGCGCC
GGCATCGGGATCCGTGTCACTTTGAGAATTTATATGGTGACACATAACAT
ACCTACGCATACGAAACATTATTACTATCACCATCATTGCCCTAGTTGCG
AGGATTAGCCGGAGGTAGTGCAGCATCCGTATCATAGCATACTACATTTG
TGTAAAATGCGAATCGTCTTATTGTTTTGTTTGTTTTATTTGCCTCTGCT
GGCGAGATTGTTTTATCTTGGAATTATTATTCTCGTATGCAAACACACTC
TGCCATCATTATTTGTATTTAGATAACAATACGTACGCTTAATGCAATGC
GAAATCAGAAATAAAGTTTTTAATGGTAGTTAAGTTCAAAAAAAAAGAAA
AAAAAAAAAAAA

FI09421.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:26:49
Subject Length Description Subject Range Query Range Score Percent Strand
ltd-RD 1601 ltd-RD 83..1520 1..1438 7175 99.9 Plus
ltd-RC 2441 ltd-RC 1145..2360 223..1438 6080 100 Plus
ltd-RE 2152 ltd-RE 931..2146 223..1438 6080 100 Plus
ltd-RC 2441 ltd-RC 24..247 1..224 1105 99.5 Plus
ltd-RE 2152 ltd-RE 1..223 1..223 1100 99.5 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 01:51:34
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 5065436..5066112 1438..762 3370 99.9 Minus
chr2R 21145070 chr2R 5066396..5066791 619..224 1980 100 Minus
chr2R 21145070 chr2R 5073681..5073904 224..1 1105 99.6 Minus
chr2R 21145070 chr2R 5066172..5066315 763..620 720 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:22:08 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 01:51:32
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 9177870..9178546 1438..762 3385 100 Minus
2R 25286936 2R 9178830..9179225 619..224 1980 100 Minus
2R 25286936 2R 9186115..9186338 224..1 1105 99.6 Minus
2R 25286936 2R 9178606..9178749 763..620 720 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:21:16
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 9179069..9179745 1438..762 3385 100 Minus
2R 25260384 2R 9180029..9180424 619..224 1980 100 Minus
2R 25260384 2R 9187314..9187537 224..1 1105 99.5 Minus
2R 25260384 2R 9179805..9179948 763..620 720 100 Minus
Blast to na_te.dros performed on 2019-03-16 01:51:33 has no hits.

FI09421.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 01:52:53 Download gff for FI09421.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 5065436..5066110 764..1438 99 <- Minus
chr2R 5066172..5066315 620..763 100 <- Minus
chr2R 5066396..5066791 224..619 100 <- Minus
chr2R 5073682..5073904 1..223 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 17:53:52 Download gff for FI09421.complete
Subject Subject Range Query Range Percent Splice Strand
ltd-RD 1..669 206..874 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 13:52:43 Download gff for FI09421.complete
Subject Subject Range Query Range Percent Splice Strand
ltd-RD 1..669 206..874 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:10:02 Download gff for FI09421.complete
Subject Subject Range Query Range Percent Splice Strand
ltd-RD 1..669 206..874 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 04:43:11 Download gff for FI09421.complete
Subject Subject Range Query Range Percent Splice Strand
ltd-RD 1..669 206..874 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-15 08:56:42 Download gff for FI09421.complete
Subject Subject Range Query Range Percent Splice Strand
ltd-RD 1..1444 1..1444 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 13:52:43 Download gff for FI09421.complete
Subject Subject Range Query Range Percent Splice Strand
ltd-RD 1..1444 1..1444 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:10:02 Download gff for FI09421.complete
Subject Subject Range Query Range Percent Splice Strand
ltd-RD 5..1448 1..1444 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 04:43:11 Download gff for FI09421.complete
Subject Subject Range Query Range Percent Splice Strand
ltd-RD 5..1448 1..1444 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 01:52:53 Download gff for FI09421.complete
Subject Subject Range Query Range Percent Splice Strand
2R 9177870..9178544 764..1438 100 <- Minus
2R 9178606..9178749 620..763 100 <- Minus
2R 9178830..9179225 224..619 100 <- Minus
2R 9186116..9186338 1..223 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 01:52:53 Download gff for FI09421.complete
Subject Subject Range Query Range Percent Splice Strand
2R 9177870..9178544 764..1438 100 <- Minus
2R 9178606..9178749 620..763 100 <- Minus
2R 9178830..9179225 224..619 100 <- Minus
2R 9186116..9186338 1..223 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 01:52:53 Download gff for FI09421.complete
Subject Subject Range Query Range Percent Splice Strand
2R 9177870..9178544 764..1438 100 <- Minus
2R 9178606..9178749 620..763 100 <- Minus
2R 9178830..9179225 224..619 100 <- Minus
2R 9186116..9186338 1..223 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:10:02 Download gff for FI09421.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 5065375..5066049 764..1438 100 <- Minus
arm_2R 5066111..5066254 620..763 100 <- Minus
arm_2R 5066335..5066730 224..619 100 <- Minus
arm_2R 5073621..5073843 1..223 99   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 11:43:32 Download gff for FI09421.complete
Subject Subject Range Query Range Percent Splice Strand
2R 9187315..9187537 1..223 99   Minus
2R 9179069..9179743 764..1438 100 <- Minus
2R 9179805..9179948 620..763 100 <- Minus
2R 9180029..9180424 224..619 100 <- Minus

FI09421.hyp Sequence

Translation from 205 to 873

> FI09421.hyp
MTLRSKAIMTSTSDKREHLYKILVIGELGTGKTSFIKRYVHQFFSQNYRA
TIGVDFALKVLQWDANTIVRLQLWDIAGQERFGNMTRVYYKEAVGAFIVF
DVTRSGTFDCVSKWKEDLDSKVQLPDGSPIPCILLANKCDQEKQGIITQP
EKMDEYVRENGFAGWFETSAKENINIDEAARALVNKILINDKLISADLAD
GDKFNLSAADATGSDAKNKCSC*

FI09421.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:47:20
Subject Length Description Subject Range Query Range Score Percent Strand
ltd-PD 222 CG8024-PD 1..222 1..222 1154 100 Plus
ltd-PC 388 CG8024-PC 169..388 3..222 1129 98.6 Plus
ltd-PE 388 CG8024-PE 169..388 3..222 1129 98.6 Plus
ltd-PJ 214 CG8024-PJ 1..214 9..222 1118 100 Plus
ltd-PH 214 CG8024-PH 1..214 9..222 1118 100 Plus

FI09421.pep Sequence

Translation from 205 to 873

> FI09421.pep
MTLRSKAIMTSTSDKREHLYKILVIGELGTGKTSFIKRYVHQFFSQNYRA
TIGVDFALKVLQWDANTIVRLQLWDIAGQERFGNMTRVYYKEAVGAFIVF
DVTRSGTFDCVSKWKEDLDSKVQLPDGSPIPCILLANKCDQEKQGIITQP
EKMDEYVRENGFAGWFETSAKENINIDEAARALVNKILINDKLISADLAD
GDKFNLSAADATGSDAKNKCSC*

FI09421.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 16:46:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF12008-PA 405 GF12008-PA 189..405 7..222 1140 97.7 Plus
Dana\GF20241-PA 204 GF20241-PA 9..171 19..188 293 36.5 Plus
Dana\GF10872-PA 219 GF10872-PA 1..184 1..187 293 37.2 Plus
Dana\GF14883-PA 239 GF14883-PA 25..239 9..222 288 33.8 Plus
Dana\GF20451-PA 200 GF20451-PA 6..200 17..221 280 31.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 16:46:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG10573-PA 414 GG10573-PA 199..414 7..222 1161 98.6 Plus
Dere\GG14295-PA 219 GG14295-PA 1..184 1..187 317 38 Plus
Dere\GG19277-PA 204 GG19277-PA 9..171 19..188 291 36.5 Plus
Dere\GG22724-PA 220 GG22724-PA 19..220 17..222 280 33.2 Plus
Dere\GG13365-PA 207 GG13365-PA 6..169 17..187 277 33.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 16:46:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH19866-PA 664 GH19866-PA 450..664 8..222 1056 90.2 Plus
Dgri\GH15503-PA 219 GH15503-PA 1..184 1..187 292 36.6 Plus
Dgri\GH12621-PA 204 GH12621-PA 9..202 19..220 286 33 Plus
Dgri\GH24197-PA 220 GH24197-PA 19..220 17..222 286 33.6 Plus
Dgri\GH24326-PA 201 GH24326-PA 6..176 17..196 280 36.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:01:20
Subject Length Description Subject Range Query Range Score Percent Strand
Rab32-PD 222 CG8024-PD 1..222 1..222 1154 100 Plus
Rab32-PC 388 CG8024-PC 169..388 3..222 1129 98.6 Plus
Rab32-PE 388 CG8024-PE 169..388 3..222 1129 98.6 Plus
Rab32-PI 389 CG8024-PI 174..389 7..222 1126 100 Plus
Rab32-PB 686 CG8024-PB 471..686 7..222 1126 100 Plus
Rab32-PJ 214 CG8024-PJ 1..214 9..222 1118 100 Plus
Rab32-PH 214 CG8024-PH 1..214 9..222 1118 100 Plus
Rab19-PB 219 CG7062-PP3-RB 1..184 1..187 312 37.2 Plus
Rab19-PA 219 CG7062-PA 1..184 1..187 312 37.2 Plus
Rab10-PA 204 CG17060-PA 9..184 19..203 293 35.1 Plus
Rab3-PB 220 CG7576-PB 19..220 17..222 287 34.1 Plus
Rab3-PA 220 CG7576-PA 19..220 17..222 287 34.1 Plus
Rab14-PD 215 CG4212-PD 1..215 9..222 282 33.8 Plus
Rab14-PA 215 CG4212-PA 1..215 9..222 282 33.8 Plus
Rab14-PB 239 CG4212-PB 25..239 9..222 282 33.8 Plus
Rab8-PC 207 CG8287-PC 6..169 17..187 281 33.3 Plus
Rab8-PA 207 CG8287-PA 6..169 17..187 281 33.3 Plus
RabX4-PA 213 CG31118-PA 9..213 20..222 276 32.4 Plus
Rab7-PC 207 CG5915-PC 2..174 13..188 275 31.2 Plus
Rab7-PB 207 CG5915-PB 2..174 13..188 275 31.2 Plus
Rab7-PA 207 CG5915-PA 2..174 13..188 275 31.2 Plus
Rab35-PB 201 CG9575-PB 6..169 17..188 274 33.7 Plus
Rab35-PD 201 CG9575-PD 6..169 17..188 274 33.7 Plus
Rab35-PA 201 CG9575-PA 6..169 17..188 274 33.7 Plus
Rab30-PD 223 CG9100-PD 7..198 19..214 268 33.5 Plus
Rab30-PC 223 CG9100-PC 7..198 19..214 268 33.5 Plus
Rab30-PB 223 CG9100-PB 7..198 19..214 268 33.5 Plus
Rab30-PA 223 CG9100-PA 7..198 19..214 268 33.5 Plus
Rab1-PA 205 CG3320-PA 1..172 9..187 267 32.4 Plus
Rab11-PA 214 CG5771-PA 1..188 9..202 266 31.5 Plus
Rab11-PB 214 CG5771-PB 1..188 9..202 266 31.5 Plus
Rab18-PA 197 CG3129-PA 7..179 21..201 265 35.4 Plus
Rab23-PA 268 CG2108-PA 32..196 14..186 263 34.1 Plus
Rab6-PB 208 CG6601-PB 13..208 20..222 262 32.4 Plus
Rab6-PA 208 CG6601-PA 13..208 20..222 262 32.4 Plus
Rab2-PB 213 CG3269-PB 5..159 18..179 258 34.6 Plus
Rab2-PA 213 CG3269-PA 5..159 18..179 258 34.6 Plus
Rab4-PA 213 CG4921-PA 2..161 13..179 249 35.1 Plus
Rab4-PB 213 CG4921-PB 2..161 13..179 249 35.1 Plus
Rab21-PC 222 CG17515-PC 14..176 20..188 238 33.1 Plus
Rab21-PD 222 CG17515-PD 14..176 20..188 238 33.1 Plus
Rab27-PC 230 CG14791-PC 1..178 9..188 235 30.1 Plus
Rab5-PI 219 CG3664-PI 22..194 12..191 233 30.4 Plus
Rab5-PH 219 CG3664-PH 22..194 12..191 233 30.4 Plus
Rab5-PG 219 CG3664-PG 22..194 12..191 233 30.4 Plus
Rab5-PE 219 CG3664-PE 22..194 12..191 233 30.4 Plus
Rab5-PC 219 CG3664-PC 22..194 12..191 233 30.4 Plus
Rab5-PD 219 CG3664-PD 22..194 12..191 233 30.4 Plus
Rab5-PF 219 CG3664-PF 22..194 12..191 233 30.4 Plus
Rab5-PB 219 CG3664-PB 22..194 12..191 233 30.4 Plus
Rab5-PA 219 CG3664-PA 22..194 12..191 233 30.4 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 16:46:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI19816-PA 665 GI19816-PA 452..665 8..222 1097 91.6 Plus
Dmoj\GI16780-PA 219 GI16780-PA 1..184 1..187 301 36.1 Plus
Dmoj\GI11034-PA 204 GI11034-PA 9..171 19..188 289 35.9 Plus
Dmoj\GI12880-PA 243 GI12880-PA 29..243 9..222 284 32 Plus
Dmoj\GI14806-PA 201 GI14806-PA 6..199 17..220 282 31.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 16:46:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL17459-PA 931 GL17459-PA 715..931 7..222 1144 94.5 Plus
Dper\GL22545-PA 219 GL22545-PA 21..184 19..187 311 39.2 Plus
Dper\GL21269-PA 239 GL21269-PA 25..239 9..222 282 31.5 Plus
Dper\GL17187-PA 220 GL17187-PA 19..193 17..200 280 35.3 Plus
Dper\GL15675-PA 207 GL15675-PA 6..169 17..187 278 33.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 16:46:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA20772-PC 726 GA20772-PC 510..726 7..222 1150 94.5 Plus
Dpse\GA20772-PB 389 GA20772-PB 169..389 3..222 1118 93.2 Plus
Dpse\GA20772-PD 215 GA20772-PD 1..215 9..222 1091 94.4 Plus
Dpse\GA20071-PA 219 GA20071-PA 21..184 19..187 311 39.2 Plus
Dpse\GA26078-PA 204 GA26078-PA 9..171 19..188 287 35.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 16:46:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM20620-PA 382 GM20620-PA 167..382 7..222 1174 99.5 Plus
Dsec\GM25038-PA 219 GM25038-PA 1..184 1..187 318 38 Plus
Dsec\GM23016-PA 204 GM23016-PA 9..171 19..188 291 36.5 Plus
Dsec\GM15560-PA 239 GM15560-PA 25..239 9..222 288 33.8 Plus
Dsec\GM20500-PA 220 GM20500-PA 19..220 17..222 280 33.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 16:46:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD10095-PA 382 GD10095-PA 167..382 7..222 1175 99.5 Plus
Dsim\GD14074-PA 219 GD14074-PA 1..184 1..187 317 38 Plus
Dsim\GD23961-PA 239 GD23961-PA 34..239 18..222 278 34.3 Plus
Dsim\GD12244-PA 207 GD12244-PA 6..169 17..187 277 33.3 Plus
Dsim\GD15551-PA 201 GD15551-PA 6..200 17..220 273 31.4 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 16:46:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ18542-PA 660 GJ18542-PA 447..660 8..222 1062 91.6 Plus
Dvir\GJ12523-PA 220 GJ12523-PA 1..184 1..187 299 37.2 Plus
Dvir\GJ15815-PA 204 GJ15815-PA 9..202 19..220 296 34 Plus
Dvir\GJ20130-PA 220 GJ20130-PA 19..220 17..222 288 33.6 Plus
Dvir\GJ19473-PA 201 GJ19473-PA 6..199 17..220 285 31.9 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 16:46:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK22864-PA 685 GK22864-PA 469..685 7..222 1123 94.5 Plus
Dwil\GK17190-PA 219 GK17190-PA 1..184 1..187 309 36.1 Plus
Dwil\GK25049-PA 204 GK25049-PA 9..171 19..188 293 36.5 Plus
Dwil\GK16335-PA 200 GK16335-PA 6..176 17..196 282 35.6 Plus
Dwil\GK19661-PA 220 GK19661-PA 19..220 17..222 280 33.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 16:46:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE22467-PA 560 GE22467-PA 345..560 7..222 1173 98.6 Plus
Dyak\GE20724-PA 219 GE20724-PA 1..184 1..187 317 38 Plus
Dyak\GE17866-PA 204 GE17866-PA 9..171 19..188 291 36.5 Plus
Dyak\GE19031-PA 239 GE19031-PA 25..239 9..222 288 33.8 Plus
Dyak\GE13081-PA 220 GE13081-PA 19..220 17..222 280 33.2 Plus