Clone FI09602 Report

Search the DGRC for FI09602

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:96
Well:2
Vector:pOT2
Associated Gene/TranscriptCG3902-RA
Protein status:FI09602.pep: gold
Sequenced Size:1589

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG3902 2008-12-18 5.12 accounting

Clone Sequence Records

FI09602.complete Sequence

1589 bp assembled on 2008-08-28

GenBank Submission: BT044429.1

> FI09602.complete
AGCAGCCCACTTTTAACGTTGTGGTGTCTCTGGGGATCAGATCCAAAATT
CAAAAAAGTCCAGTTTGGCCTCTTGATTAAATCAATTCTTCCACTTCATT
CAAGATGATGAACAGCCTAAAGAAATTGCCCGTGCGCATGCTGGCTAACG
CTGCACGTCAGCAAAGTGCTGCGATGTCCTCGGCAACTGGTCTCCCCCCA
CCCCTCACCTTTCTCACCGACGATGAGAAAATGATGAAGGAGACTGTTGC
CAAACTGGCTCAGGAGCAGATCCAGCCCTTGGTGAAGAAAATGGACTTTG
AGCACAAATTCGATCCCTCCGTGGTGAAGGCGGTTTTCGAGAACGGCCTG
ATGGGCATTGAGATCGACACCGAGCTGGGAGGCAGTGGCTGCAACTTCAT
GACCAACATCGTCGTGGTGGAGGAGCTGTCCAAAATCGATCCTGCCGTCG
CCGCTTTTGTGGACATTCACAACACACTGGTCAACTCGCTGATGATCAAG
TTCGGCAATGCCGAGCAGAAGGCGAAGTATCTGCCTAAGCTGGCCCAGGA
GTACGCCGGTAGCTTCGCCCTGACCGAACCCGGTGCAGGATCCGATGCCT
TCTCCCTGAAGACCGTCGCCAAGAAGGACGGCTCCCACTACGTAATCAAC
GGCTCCAAGATGTGGATCTCCAACTCTGATGTGGCGGGAGTCTTCCTGAT
CTTTGCCAATGCCAAGCCAGAGGATGGCTACCGTGGCATTACCACCTTCA
TTGTGGACCGTGAGACTCCCGGTCTGATCGTGAACAAGCCGGAGGACAAG
CTGGGCATCCGTGCCTCTGGAACCTGCCAGCTCACCTTCGACAACGTGCG
TGTGCCCGAGGAGAACATCCTGGGAACCTTCGGCCATGGCTACAAGTATG
CCGCCGGCTTCCTGAACGAGGGTCGCATCGGTATTGCTGCCCAGATGGTG
GGCCTGGCCCAAGGAACCTTCGACGCGACCATTCCGTACCTGCTGGAGCG
CAAGCAGTTCGGTGATGCCATCTATAACTTCCAGTCGATGCAGCATCAGA
TCGCCACCGTGGCCACGGAGATCGAGGCCGCCCGCCTGATGACCTACAAT
GCTGCACGTCTGCAGGAGCAGGGTGTGCCCTTCCAGAAGGAGGCGGCCAT
GGCCAAGTACTACGCCTCCGAGGTGGCCCAGAGGGCGGCGATCAAGTGCG
TCGACTGGATGGGAGGCGTTGGCTTCACCCGTGATTTCCCGCAGGAGAAG
TACTACCGTGACGTGAAGATCGGAGCCATTTACGAGGGCACCACCAACAT
GCAGCTGAGCACCATTGCCAAGTGCATCAAGAAGGATTATGCGGCCTAAA
GACTACCCCGATACTCCTCCTTCCCCCAACATATCCCCCACACAAGCTGA
GATATCGTACGTCAGATACGTCAAGTGCATTTATGCGTGGGAACCGCTGG
AACAATTTTGACGGCCATCCGTTATCGGTTCTCACCATGTTAACGTAGCA
TTTACCACTTAGTTGATTCTGTTATGCATATTGTATAAAATACAATTAAA
ATATATACACATATAAAATTTAAAAAAAAAAAAAAAAAA

FI09602.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:08:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG3902-RA 1663 CG3902-RA 93..1663 1..1571 7855 100 Plus
CG11637-RA 749 CG11637-RA 583..749 1579..1413 820 99.4 Minus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 17:54:44
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 18882727..18883572 1571..726 4230 100 Minus
chr3L 24539361 chr3L 18883962..18884442 726..246 2390 99.8 Minus
chr3L 24539361 chr3L 18887746..18887885 140..1 700 100 Minus
chr3L 24539361 chr3L 18887550..18887656 246..140 535 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:22:12 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 17:54:42
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 18893112..18893965 1579..726 4255 99.9 Minus
3L 28110227 3L 18894355..18894835 726..246 2405 100 Minus
3L 28110227 3L 18898140..18898279 140..1 700 100 Minus
3L 28110227 3L 18897944..18898050 246..140 535 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:26:23
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 18886212..18887065 1579..726 4255 99.8 Minus
3L 28103327 3L 18887455..18887935 726..246 2405 100 Minus
3L 28103327 3L 18891240..18891379 140..1 700 100 Minus
3L 28103327 3L 18891044..18891150 246..140 535 100 Minus
Blast to na_te.dros performed 2019-03-16 17:54:43
Subject Length Description Subject Range Query Range Score Percent Strand
Tabor 7345 Tabor TABOR 7345bp 6718..6787 1502..1571 116 62.9 Plus

FI09602.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 17:55:40 Download gff for FI09602.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 18882766..18883572 726..1532 100 <- Minus
chr3L 18883963..18884441 247..725 99 <- Minus
chr3L 18887550..18887655 141..246 100 <- Minus
chr3L 18887746..18887885 1..140 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:00:20 Download gff for FI09602.complete
Subject Subject Range Query Range Percent Splice Strand
CG3902-RA 1..1245 105..1349 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:12:03 Download gff for FI09602.complete
Subject Subject Range Query Range Percent Splice Strand
CG3902-RA 1..1245 105..1349 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:41:19 Download gff for FI09602.complete
Subject Subject Range Query Range Percent Splice Strand
CG3902-RA 1..1245 105..1349 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-09-08 12:20:02 Download gff for FI09602.complete
Subject Subject Range Query Range Percent Splice Strand
CG3902-RA 1..1245 105..1349 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:22:24 Download gff for FI09602.complete
Subject Subject Range Query Range Percent Splice Strand
CG3902-RA 1..1245 105..1349 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:09:31 Download gff for FI09602.complete
Subject Subject Range Query Range Percent Splice Strand
CG3902-RA 12..1582 1..1571 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:12:03 Download gff for FI09602.complete
Subject Subject Range Query Range Percent Splice Strand
CG3902-RA 12..1582 1..1571 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:41:19 Download gff for FI09602.complete
Subject Subject Range Query Range Percent Splice Strand
CG3902-RA 15..1585 1..1571 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-28 18:06:54 Download gff for FI09602.complete
Subject Subject Range Query Range Percent Splice Strand
CG3902-RA 12..1582 1..1571 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:22:24 Download gff for FI09602.complete
Subject Subject Range Query Range Percent Splice Strand
CG3902-RA 15..1585 1..1571 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:55:40 Download gff for FI09602.complete
Subject Subject Range Query Range Percent Splice Strand
3L 18893120..18893965 726..1571 100 <- Minus
3L 18894356..18894834 247..725 100 <- Minus
3L 18897944..18898049 141..246 100 <- Minus
3L 18898140..18898279 1..140 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:55:40 Download gff for FI09602.complete
Subject Subject Range Query Range Percent Splice Strand
3L 18893120..18893965 726..1571 100 <- Minus
3L 18894356..18894834 247..725 100 <- Minus
3L 18897944..18898049 141..246 100 <- Minus
3L 18898140..18898279 1..140 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 17:55:40 Download gff for FI09602.complete
Subject Subject Range Query Range Percent Splice Strand
3L 18893120..18893965 726..1571 100 <- Minus
3L 18894356..18894834 247..725 100 <- Minus
3L 18897944..18898049 141..246 100 <- Minus
3L 18898140..18898279 1..140 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:41:19 Download gff for FI09602.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 18886220..18887065 726..1571 100 <- Minus
arm_3L 18887456..18887934 247..725 100 <- Minus
arm_3L 18891044..18891149 141..246 100 <- Minus
arm_3L 18891240..18891379 1..140 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:42:26 Download gff for FI09602.complete
Subject Subject Range Query Range Percent Splice Strand
3L 18886220..18887065 726..1571 100 <- Minus
3L 18887456..18887934 247..725 100 <- Minus
3L 18891044..18891149 141..246 100 <- Minus
3L 18891240..18891379 1..140 100   Minus

FI09602.pep Sequence

Translation from 104 to 1348

> FI09602.pep
MMNSLKKLPVRMLANAARQQSAAMSSATGLPPPLTFLTDDEKMMKETVAK
LAQEQIQPLVKKMDFEHKFDPSVVKAVFENGLMGIEIDTELGGSGCNFMT
NIVVVEELSKIDPAVAAFVDIHNTLVNSLMIKFGNAEQKAKYLPKLAQEY
AGSFALTEPGAGSDAFSLKTVAKKDGSHYVINGSKMWISNSDVAGVFLIF
ANAKPEDGYRGITTFIVDRETPGLIVNKPEDKLGIRASGTCQLTFDNVRV
PEENILGTFGHGYKYAAGFLNEGRIGIAAQMVGLAQGTFDATIPYLLERK
QFGDAIYNFQSMQHQIATVATEIEAARLMTYNAARLQEQGVPFQKEAAMA
KYYASEVAQRAAIKCVDWMGGVGFTRDFPQEKYYRDVKIGAIYEGTTNMQ
LSTIAKCIKKDYAA*

FI09602.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 12:18:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF10801-PA 415 GF10801-PA 1..414 1..413 2074 94.7 Plus
Dana\GF17623-PA 405 GF17623-PA 24..405 34..414 747 38.2 Plus
Dana\GF17739-PA 418 GF17739-PA 37..414 34..411 727 38 Plus
Dana\GF10656-PA 420 GF10656-PA 6..409 11..406 619 37.3 Plus
Dana\GF10158-PA 419 GF10158-PA 38..418 37..412 557 33.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 12:18:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG13447-PA 414 GG13447-PA 1..414 1..414 2213 99.5 Plus
Dere\Arc42-PA 405 GG23560-PA 24..405 34..414 758 39 Plus
Dere\GG17152-PA 415 GG17152-PA 34..411 34..411 711 37.2 Plus
Dere\GG14445-PA 419 GG14445-PA 1..409 2..406 611 36.6 Plus
Dere\GG15072-PA 420 GG15072-PA 39..419 37..412 551 33.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 12:18:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH16965-PA 414 GH16965-PA 1..411 1..411 2109 94.2 Plus
Dgri\GH16400-PA 406 GH16400-PA 27..406 37..414 763 39.7 Plus
Dgri\GH15455-PA 336 GH15455-PA 2..332 81..410 682 40.7 Plus
Dgri\GH14704-PA 419 GH14704-PA 4..408 2..406 619 36.8 Plus
Dgri\GH22516-PA 424 GH22516-PA 43..423 37..412 544 33.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:27:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG3902-PA 414 CG3902-PA 1..414 1..414 2118 100 Plus
Arc42-PA 405 CG4703-PA 24..405 34..414 736 39 Plus
CG4860-PA 415 CG4860-PA 34..411 34..411 698 37.5 Plus
CG12262-PA 419 CG12262-PA 6..409 11..406 595 36.5 Plus
CG6638-PA 420 CG6638-PA 39..419 37..412 548 33.3 Plus
CG7461-PC 627 CG7461-PC 96..440 64..399 524 35.1 Plus
CG7461-PB 627 CG7461-PB 96..440 64..399 524 35.1 Plus
CG9547-PA 419 CG9547-PA 41..411 37..408 410 29.5 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 12:18:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI11829-PA 414 GI11829-PA 1..413 1..413 2129 94.4 Plus
Dmoj\GI22432-PA 406 GI22432-PA 24..406 34..414 761 39.4 Plus
Dmoj\GI22465-PA 407 GI22465-PA 26..401 34..408 708 37.4 Plus
Dmoj\GI12250-PA 420 GI12250-PA 4..408 2..406 631 37.2 Plus
Dmoj\GI12421-PA 421 GI12421-PA 2..420 4..412 569 32.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 12:18:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL25250-PA 415 GL25250-PA 1..414 1..413 2063 93.2 Plus
Dper\GL12205-PA 405 GL12205-PA 27..405 37..414 768 39.6 Plus
Dper\GL21568-PA 413 GL21568-PA 32..409 34..411 719 38 Plus
Dper\GL25095-PA 419 GL25095-PA 4..409 2..406 600 35.9 Plus
Dper\GL10298-PA 420 GL10298-PA 13..419 12..412 537 31.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 12:18:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA17761-PA 415 GA17761-PA 1..414 1..413 2063 93.2 Plus
Dpse\Arc42-PA 405 GA18369-PA 27..405 37..414 768 39.6 Plus
Dpse\GA18485-PA 411 GA18485-PA 30..407 34..411 720 38 Plus
Dpse\GA11516-PA 419 GA11516-PA 4..409 2..406 600 35.9 Plus
Dpse\GA19744-PA 420 GA19744-PA 13..419 12..412 537 31.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 12:18:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM14915-PA 398 GM14915-PA 1..398 1..414 1956 92.8 Plus
Dsec\GM26869-PA 405 GM26869-PA 24..405 34..414 762 39 Plus
Dsec\GM26034-PA 420 GM26034-PA 13..416 19..411 715 36.9 Plus
Dsec\GM24997-PA 419 GM24997-PA 6..409 11..406 608 36.8 Plus
Dsec\GM16092-PA 357 GM16092-PA 24..357 34..414 604 34.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 12:18:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD12323-PA 420 GD12323-PA 1..420 1..414 2155 96.7 Plus
Dsim\GD19319-PA 405 GD19319-PA 24..405 34..414 760 39 Plus
Dsim\GD20592-PA 415 GD20592-PA 13..411 19..411 712 36.5 Plus
Dsim\GD14030-PA 439 GD14030-PA 6..409 11..406 607 36.8 Plus
Dsim\GD12977-PA 420 GD12977-PA 39..419 37..412 552 33.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 12:18:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ13529-PA 414 GJ13529-PA 1..413 1..413 2068 93.9 Plus
Dvir\GJ10995-PA 406 GJ10995-PA 24..405 34..413 762 38.7 Plus
Dvir\GJ10063-PA 408 GJ10063-PA 27..402 34..408 731 39 Plus
Dvir\GJ11482-PA 420 GJ11482-PA 4..408 2..406 624 36.7 Plus
Dvir\GJ19560-PA 420 GJ19560-PA 4..408 2..406 624 36.7 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 12:18:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK20439-PA 417 GK20439-PA 1..416 1..413 2133 94.7 Plus
Dwil\Arc42-PA 405 GK22361-PA 24..405 34..414 759 39.5 Plus
Dwil\GK11564-PA 384 GK11564-PA 2..383 34..413 703 37.3 Plus
Dwil\GK23895-PA 420 GK23895-PA 6..408 11..406 613 37.1 Plus
Dwil\GK20558-PA 423 GK20558-PA 43..422 37..412 566 34.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 12:18:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE22549-PA 414 GE22549-PA 1..414 1..414 2210 99.3 Plus
Dyak\GE22545-PA 414 GE22545-PA 1..414 1..414 2210 99.3 Plus
Dyak\GE25631-PA 405 GE25631-PA 24..405 34..414 753 39 Plus
Dyak\GE24541-PA 415 GE24541-PA 34..411 34..411 708 37.2 Plus
Dyak\GE21636-PA 419 GE21636-PA 6..409 11..406 613 37 Plus

FI09602.hyp Sequence

Translation from 104 to 1348

> FI09602.hyp
MMNSLKKLPVRMLANAARQQSAAMSSATGLPPPLTFLTDDEKMMKETVAK
LAQEQIQPLVKKMDFEHKFDPSVVKAVFENGLMGIEIDTELGGSGCNFMT
NIVVVEELSKIDPAVAAFVDIHNTLVNSLMIKFGNAEQKAKYLPKLAQEY
AGSFALTEPGAGSDAFSLKTVAKKDGSHYVINGSKMWISNSDVAGVFLIF
ANAKPEDGYRGITTFIVDRETPGLIVNKPEDKLGIRASGTCQLTFDNVRV
PEENILGTFGHGYKYAAGFLNEGRIGIAAQMVGLAQGTFDATIPYLLERK
QFGDAIYNFQSMQHQIATVATEIEAARLMTYNAARLQEQGVPFQKEAAMA
KYYASEVAQRAAIKCVDWMGGVGFTRDFPQEKYYRDVKIGAIYEGTTNMQ
LSTIAKCIKKDYAA*

FI09602.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:47:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG3902-PA 414 CG3902-PA 1..414 1..414 2118 100 Plus
Arc42-PA 405 CG4703-PA 24..405 34..414 736 39 Plus
CG4860-PA 415 CG4860-PA 34..411 34..411 698 37.5 Plus
CG12262-PA 419 CG12262-PA 6..409 11..406 595 36.5 Plus
CG6638-PA 420 CG6638-PA 39..419 37..412 548 33.3 Plus