Clone FI09604 Report

Search the DGRC for FI09604

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:96
Well:4
Vector:pOT2
Associated Gene/TranscriptCG1314-RA
Protein status:FI09604.pep: gold
Sequenced Size:1428

Clone Sequence Records

FI09604.complete Sequence

1428 bp assembled on 2009-05-14

GenBank Submission: BT083450.1

> FI09604.complete
CTCACACAGAATTATAATCACAAAAAAAAAAAAACCGACATTTTCTTAAA
AATTCCTAAATGGAGAACAACAATTGCGAGGGCGAGCAACCATCGACATC
CGGTGCATTCTGTAGGTGCTCCGAGTCTGGCATTGGTATATCTGCCGTCC
TGGATCTCGCTCAGTCGGAGTACTCCCTGGACACCACGCCGGAAGCTGTG
ATGGCGAGTGCATGTCGTCTGGAGAACGAGAACGATGGTAATGATACCGA
TGAGGAGGTGGAGATCTGCTTCACCAGCTTGATGCCCGATCACCGTAGGC
GCTTGTATATGGACTGCAAGCTGTCTCTTCCGGCGGGCGGAAGAGTGCCC
ATGCGCGGCGGCGCAGAAGCCATTTCCGCTTCCCCACATGGCAGAATCAG
TTCTCCGGAAATTCGCTATGAGCGGCTGAGAAATACTGCAGTCGAGGTGC
GCAAATACTGGAGATTGCAGAAGCTGGACATGGCTTGTCCGCTGAGCAAT
TGCGACTTGATGTTCAATCCTGAGCAGCTCCTAAGTCACTGCCTGATGCA
CCACGAGCACATTATTACAATGGAAATGAAGCCCAAGGAGCCAAAGGTTC
TGAAGCTGTGTGGAAAATCCTTGCCCGAGGACAGGGGCAAAAGCAACTGT
GTGGGTCTGATGATCTACGAGAGTGGCAACAACGCGACCAGGAACTTAAA
TCTACCCAATATCTACAAGGACTGGGAGTGCCAATTGCCCGTCCTGATAA
TGCTGTGGAAGACTTCCTGGGACTCGATGCCCGTCGGACCGCGAGTGACC
CATATCTATATTCTGTGGCTGTGCTGTCCCCAGGCCCAGACGCCTTTGTT
GGTATCCGTGAATATCGGAGAAAACACTCCGGGAGTGCCACGTCGGCAGA
TGATTCAGACCTGTCAAGGCTCGGAGACCCTGAAGAATTGCGATCTGCTT
TCGGACAGTCCGCATTTTATGCGATTCACACATCGCGAAATGAAGGAGCA
CACTGAAGACTACACGCTGGACGTCGACCTACAGTTCACCATTCTAGAGG
ATGAGGGTAGAGTGGGGCCCATATCGCCTAATCCTAATGAGGGCACCTTT
CGCGAAGACGACATCGAAATAGAACTTGCGGAAAAGGAGAATACCTCCAA
GGAGGAGGTATTTATTGGGAACTCAGAAGGGCCTCAAGCGAACTAAACGC
AGTCTATCACAATGATTTTTGGAATGATTTTTCAAAATTATTTGCATTAC
TTTGATACTGTACCTAAAAATTGTTTCAAGTTTTTTTAAATTATTTTGGA
TCACTTTGTACTTGGACGAAATACCATATCTCATAAGCAATTCAACATAT
GCAATCTTGTAAATTTTCATCAAAATTGTATCAGTAAAGATCAAATTCCT
TATTAGAACTAAAAAAAAAAAAAAAAAA

FI09604.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:26:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG1314-RA 1409 CG1314-RA 1..1409 1..1410 7010 99.9 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 07:15:55
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 20733329..20734737 1410..1 6865 99.3 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:22:13 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 07:15:53
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 20867985..20869397 1414..1 7020 99.9 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:21:13
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 20853077..20854489 1414..1 7030 99.9 Minus
Blast to na_te.dros performed on 2019-03-16 07:15:53 has no hits.

FI09604.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 07:16:49 Download gff for FI09604.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 20733329..20734737 1..1410 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 17:53:54 Download gff for FI09604.complete
Subject Subject Range Query Range Percent Splice Strand
CG1314-RA 1..1137 60..1196 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 13:52:39 Download gff for FI09604.complete
Subject Subject Range Query Range Percent Splice Strand
CG1314-RA 1..1137 60..1196 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 10:00:32 Download gff for FI09604.complete
Subject Subject Range Query Range Percent Splice Strand
CG1314-RA 1..1137 60..1196 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:28:48 Download gff for FI09604.complete
Subject Subject Range Query Range Percent Splice Strand
CG1314-RA 1..1137 60..1196 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-15 08:56:45 Download gff for FI09604.complete
Subject Subject Range Query Range Percent Splice Strand
CG1314-RA 1..1409 1..1410 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 13:52:39 Download gff for FI09604.complete
Subject Subject Range Query Range Percent Splice Strand
CG1314-RA 1..1409 1..1410 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:00:32 Download gff for FI09604.complete
Subject Subject Range Query Range Percent Splice Strand
CG1314-RA 1..1409 1..1410 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:28:48 Download gff for FI09604.complete
Subject Subject Range Query Range Percent Splice Strand
CG1314-RA 1..1409 1..1410 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:16:49 Download gff for FI09604.complete
Subject Subject Range Query Range Percent Splice Strand
X 20867989..20869397 1..1410 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:16:49 Download gff for FI09604.complete
Subject Subject Range Query Range Percent Splice Strand
X 20867989..20869397 1..1410 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:16:49 Download gff for FI09604.complete
Subject Subject Range Query Range Percent Splice Strand
X 20867989..20869397 1..1410 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:00:32 Download gff for FI09604.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 20739016..20740424 1..1410 99   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 11:43:29 Download gff for FI09604.complete
Subject Subject Range Query Range Percent Splice Strand
X 20853081..20854489 1..1410 99   Minus

FI09604.hyp Sequence

Translation from 59 to 1195

> FI09604.hyp
MENNNCEGEQPSTSGAFCRCSESGIGISAVLDLAQSEYSLDTTPEAVMAS
ACRLENENDGNDTDEEVEICFTSLMPDHRRRLYMDCKLSLPAGGRVPMRG
GAEAISASPHGRISSPEIRYERLRNTAVEVRKYWRLQKLDMACPLSNCDL
MFNPEQLLSHCLMHHEHIITMEMKPKEPKVLKLCGKSLPEDRGKSNCVGL
MIYESGNNATRNLNLPNIYKDWECQLPVLIMLWKTSWDSMPVGPRVTHIY
ILWLCCPQAQTPLLVSVNIGENTPGVPRRQMIQTCQGSETLKNCDLLSDS
PHFMRFTHREMKEHTEDYTLDVDLQFTILEDEGRVGPISPNPNEGTFRED
DIEIELAEKENTSKEEVFIGNSEGPQAN*

FI09604.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:47:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG1314-PA 378 CG1314-PA 1..378 1..378 2037 100 Plus

FI09604.pep Sequence

Translation from 59 to 1195

> FI09604.pep
MENNNCEGEQPSTSGAFCRCSESGIGISAVLDLAQSEYSLDTTPEAVMAS
ACRLENENDGNDTDEEVEICFTSLMPDHRRRLYMDCKLSLPAGGRVPMRG
GAEAISASPHGRISSPEIRYERLRNTAVEVRKYWRLQKLDMACPLSNCDL
MFNPEQLLSHCLMHHEHIITMEMKPKEPKVLKLCGKSLPEDRGKSNCVGL
MIYESGNNATRNLNLPNIYKDWECQLPVLIMLWKTSWDSMPVGPRVTHIY
ILWLCCPQAQTPLLVSVNIGENTPGVPRRQMIQTCQGSETLKNCDLLSDS
PHFMRFTHREMKEHTEDYTLDVDLQFTILEDEGRVGPISPNPNEGTFRED
DIEIELAEKENTSKEEVFIGNSEGPQAN*

FI09604.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 16:45:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF21867-PA 523 GF21867-PA 18..331 26..332 821 52.5 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 16:45:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG17570-PA 386 GG17570-PA 13..386 7..378 1360 70.4 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:46:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG1314-PA 378 CG1314-PA 1..378 1..378 2037 100 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 16:45:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL15917-PA 553 GL15917-PA 15..362 12..345 425 32 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 16:45:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA12073-PA 553 GA12073-PA 21..350 22..332 416 32.1 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 16:45:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM24617-PA 134 GM24617-PA 1..134 225..358 556 78.4 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 16:45:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD24656-PA 352 GD24656-PA 3..352 4..358 1465 79.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 16:45:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE15330-PA 383 GE15330-PA 1..340 1..337 1320 73.5 Plus