Clone Sequence Records
FI09604.complete Sequence
1428 bp assembled on 2009-05-14
GenBank Submission: BT083450.1
> FI09604.complete
CTCACACAGAATTATAATCACAAAAAAAAAAAAACCGACATTTTCTTAAA
AATTCCTAAATGGAGAACAACAATTGCGAGGGCGAGCAACCATCGACATC
CGGTGCATTCTGTAGGTGCTCCGAGTCTGGCATTGGTATATCTGCCGTCC
TGGATCTCGCTCAGTCGGAGTACTCCCTGGACACCACGCCGGAAGCTGTG
ATGGCGAGTGCATGTCGTCTGGAGAACGAGAACGATGGTAATGATACCGA
TGAGGAGGTGGAGATCTGCTTCACCAGCTTGATGCCCGATCACCGTAGGC
GCTTGTATATGGACTGCAAGCTGTCTCTTCCGGCGGGCGGAAGAGTGCCC
ATGCGCGGCGGCGCAGAAGCCATTTCCGCTTCCCCACATGGCAGAATCAG
TTCTCCGGAAATTCGCTATGAGCGGCTGAGAAATACTGCAGTCGAGGTGC
GCAAATACTGGAGATTGCAGAAGCTGGACATGGCTTGTCCGCTGAGCAAT
TGCGACTTGATGTTCAATCCTGAGCAGCTCCTAAGTCACTGCCTGATGCA
CCACGAGCACATTATTACAATGGAAATGAAGCCCAAGGAGCCAAAGGTTC
TGAAGCTGTGTGGAAAATCCTTGCCCGAGGACAGGGGCAAAAGCAACTGT
GTGGGTCTGATGATCTACGAGAGTGGCAACAACGCGACCAGGAACTTAAA
TCTACCCAATATCTACAAGGACTGGGAGTGCCAATTGCCCGTCCTGATAA
TGCTGTGGAAGACTTCCTGGGACTCGATGCCCGTCGGACCGCGAGTGACC
CATATCTATATTCTGTGGCTGTGCTGTCCCCAGGCCCAGACGCCTTTGTT
GGTATCCGTGAATATCGGAGAAAACACTCCGGGAGTGCCACGTCGGCAGA
TGATTCAGACCTGTCAAGGCTCGGAGACCCTGAAGAATTGCGATCTGCTT
TCGGACAGTCCGCATTTTATGCGATTCACACATCGCGAAATGAAGGAGCA
CACTGAAGACTACACGCTGGACGTCGACCTACAGTTCACCATTCTAGAGG
ATGAGGGTAGAGTGGGGCCCATATCGCCTAATCCTAATGAGGGCACCTTT
CGCGAAGACGACATCGAAATAGAACTTGCGGAAAAGGAGAATACCTCCAA
GGAGGAGGTATTTATTGGGAACTCAGAAGGGCCTCAAGCGAACTAAACGC
AGTCTATCACAATGATTTTTGGAATGATTTTTCAAAATTATTTGCATTAC
TTTGATACTGTACCTAAAAATTGTTTCAAGTTTTTTTAAATTATTTTGGA
TCACTTTGTACTTGGACGAAATACCATATCTCATAAGCAATTCAACATAT
GCAATCTTGTAAATTTTCATCAAAATTGTATCAGTAAAGATCAAATTCCT
TATTAGAACTAAAAAAAAAAAAAAAAAA
FI09604.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 16:26:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1314-RA | 1409 | CG1314-RA | 1..1409 | 1..1410 | 7010 | 99.9 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 07:15:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chrX | 22417052 | chrX | 20733329..20734737 | 1410..1 | 6865 | 99.3 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:22:13 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 07:15:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 20867985..20869397 | 1414..1 | 7020 | 99.9 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:21:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23527363 | X | 20853077..20854489 | 1414..1 | 7030 | 99.9 | Minus |
Blast to na_te.dros performed on 2019-03-16 07:15:53 has no hits.
FI09604.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 07:16:49 Download gff for
FI09604.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chrX | 20733329..20734737 | 1..1410 | 99 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 17:53:54 Download gff for
FI09604.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1314-RA | 1..1137 | 60..1196 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 13:52:39 Download gff for
FI09604.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1314-RA | 1..1137 | 60..1196 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 10:00:32 Download gff for
FI09604.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1314-RA | 1..1137 | 60..1196 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:28:48 Download gff for
FI09604.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1314-RA | 1..1137 | 60..1196 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-05-15 08:56:45 Download gff for
FI09604.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1314-RA | 1..1409 | 1..1410 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 13:52:39 Download gff for
FI09604.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1314-RA | 1..1409 | 1..1410 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:00:32 Download gff for
FI09604.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1314-RA | 1..1409 | 1..1410 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:28:48 Download gff for
FI09604.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1314-RA | 1..1409 | 1..1410 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:16:49 Download gff for
FI09604.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 20867989..20869397 | 1..1410 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:16:49 Download gff for
FI09604.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 20867989..20869397 | 1..1410 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 07:16:49 Download gff for
FI09604.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 20867989..20869397 | 1..1410 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:00:32 Download gff for
FI09604.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 20739016..20740424 | 1..1410 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 11:43:29 Download gff for
FI09604.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 20853081..20854489 | 1..1410 | 99 | | Minus |
FI09604.hyp Sequence
Translation from 59 to 1195
> FI09604.hyp
MENNNCEGEQPSTSGAFCRCSESGIGISAVLDLAQSEYSLDTTPEAVMAS
ACRLENENDGNDTDEEVEICFTSLMPDHRRRLYMDCKLSLPAGGRVPMRG
GAEAISASPHGRISSPEIRYERLRNTAVEVRKYWRLQKLDMACPLSNCDL
MFNPEQLLSHCLMHHEHIITMEMKPKEPKVLKLCGKSLPEDRGKSNCVGL
MIYESGNNATRNLNLPNIYKDWECQLPVLIMLWKTSWDSMPVGPRVTHIY
ILWLCCPQAQTPLLVSVNIGENTPGVPRRQMIQTCQGSETLKNCDLLSDS
PHFMRFTHREMKEHTEDYTLDVDLQFTILEDEGRVGPISPNPNEGTFRED
DIEIELAEKENTSKEEVFIGNSEGPQAN*
FI09604.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:47:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1314-PA | 378 | CG1314-PA | 1..378 | 1..378 | 2037 | 100 | Plus |
FI09604.pep Sequence
Translation from 59 to 1195
> FI09604.pep
MENNNCEGEQPSTSGAFCRCSESGIGISAVLDLAQSEYSLDTTPEAVMAS
ACRLENENDGNDTDEEVEICFTSLMPDHRRRLYMDCKLSLPAGGRVPMRG
GAEAISASPHGRISSPEIRYERLRNTAVEVRKYWRLQKLDMACPLSNCDL
MFNPEQLLSHCLMHHEHIITMEMKPKEPKVLKLCGKSLPEDRGKSNCVGL
MIYESGNNATRNLNLPNIYKDWECQLPVLIMLWKTSWDSMPVGPRVTHIY
ILWLCCPQAQTPLLVSVNIGENTPGVPRRQMIQTCQGSETLKNCDLLSDS
PHFMRFTHREMKEHTEDYTLDVDLQFTILEDEGRVGPISPNPNEGTFRED
DIEIELAEKENTSKEEVFIGNSEGPQAN*
FI09604.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 16:45:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF21867-PA | 523 | GF21867-PA | 18..331 | 26..332 | 821 | 52.5 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 16:45:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG17570-PA | 386 | GG17570-PA | 13..386 | 7..378 | 1360 | 70.4 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:46:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1314-PA | 378 | CG1314-PA | 1..378 | 1..378 | 2037 | 100 | Plus |
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 16:45:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dper\GL15917-PA | 553 | GL15917-PA | 15..362 | 12..345 | 425 | 32 | Plus |
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 16:45:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dpse\GA12073-PA | 553 | GA12073-PA | 21..350 | 22..332 | 416 | 32.1 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 16:45:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM24617-PA | 134 | GM24617-PA | 1..134 | 225..358 | 556 | 78.4 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 16:45:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD24656-PA | 352 | GD24656-PA | 3..352 | 4..358 | 1465 | 79.2 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 16:45:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE15330-PA | 383 | GE15330-PA | 1..340 | 1..337 | 1320 | 73.5 | Plus |