Clone FI09606 Report

Search the DGRC for FI09606

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:96
Well:6
Vector:pOT2
Associated Gene/TranscriptCG4669-RA
Protein status:FI09606.pep: gold
Sequenced Size:2078

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG4669 2008-08-15 Release 5.9 accounting
CG4669 2008-12-18 5.12 accounting

Clone Sequence Records

FI09606.complete Sequence

2078 bp assembled on 2008-08-14

GenBank Submission: BT044431.1

> FI09606.complete
CCTCTTCCTCAGTAACTGCCAACGATCGGAAACACTCGATTGAAAATTGT
TAAATTATTTGTAGTACAACAAAAGTTTTTGCTATTTCAAAATCTTCGTA
AAATGGCCAACCGTATGAGAGGAGGAGCCTGCTGTCCTTCAAGATGTCAG
CCCGCCTGTCCACCATGTCCGCCACCTGGTCCGCCCTGCGATGCACCTCT
GGTGCGACTGGATAAACTGTGGCCGGAGCCCTACAATCCTTGCTCCTTCA
AGAATTGCCTGATCTTTGGCGGTCACGATGAGCCCTATATTCGACCCTTT
GATCCTAAGGGTTGTACACGAATGCGTCGCAATGATATCGACCGATCGTT
GGGCTATCCCATAGGCGTAGTGTCTGGTACGACTGTTGTAAAGTCGGGCA
TTCCGAATCAGGAGAGCGTCCGGTTTGCTTCAAATCTTAAGGCATTTGCT
CATTCCTATTACACGCGGCGCGATGAATGGAAACCGGATACGATCGATAT
GGTGGTGAACGAGGGTCAGGTTTTGTTTAACGATTCCGAGAACATGGACC
CTCCGAATGCATCAGACTCGCCGGATATCTACGATGAAAATGAGCAAAAG
GTGACGCGCCACTTTAAGATCAACGATATCGAGTTTGCCATGGAGTTGGA
GGCGCCCTTTGAGGTCTATGGCTACGAAAACGTCATACGCAATCTACGCA
GAATCTTAAGAGCCTTCTTCAAAAAGGCCAAATACGGTGTGTTCTTCACA
CCCAATTGGTATCTGCTGATTTGGAAAGAGAAGGGTGTTTGGATGGTACT
CGATTTGAATGGCAGGGACAAAAACACGATGAAACCGAACAATGAAGAGG
GGTATCCCCTATTGTTAGGCCTCAAGTCCTTCGATAATGTTGTTTGGTTG
ATTAAAAAGGAGAGCTATCTTGATAAGAACGCTAAGTTTTCAATTAGAGA
AATCCTCGTTGTTCGTTTGGCCACCCCTGGAAGTACTGGTCAAAGTTGGG
AGCGAGAACATGGCATGCGAATGAGCCAGTTCGATGTGATTGCCTCCGAT
TATGCGTATGTCAAGTCAAATCTTCATCTCACCCTAAACTCGAAGGATGC
GCTAAGGAATCGTAGTGCTCTACCTGTGGCCGTGGCAACTGCATTGGCAT
CGAAGATCGATCATCCAGCCACTTGGGACCAGAAAATGTACGATAAGGTC
ATGTGCTATGGCGTTAATATGTGCAAAAATTGCTGGGAACCCTGTATGGA
TCCCAGTAAACCGATGGATCTCGATGATTTTCCACGACAGATTCGCTTGG
GTCAGTTTGTGGCCGAGATTATGCTAACTCCAAATGCCTACGAGGGCTGG
TGGAAGTGTGTGCCGATGTACAAGTTCAACGATTTCCATCTTATGTTGGA
GAAGGCTCTCGATCAAAACGATTATATAATCTTCCAGATCAACAATCAGA
TGTATTCGCTGTGGAAGAAGTCGGATTTTATCTACCTAATGGATCCGTAT
CGCCACAATATAGTGGGTCGCATTTTGGAGGAGGGCGAGGATCCGAAAAG
TGCCACGGTTCGCATGTTCGGTAATATGGATCGTCTGTTGAGTGTTTTCC
ATCAGATCCTATTGGAATCGAATCGATCCGCTGTATTCCATATACATACG
CTCCGGATTAGAAATATTACAGAATGTCCGCCGGGCACAGCTCCTGCCCT
ACTACCTCCGGATGAGGATGTGGAGGTAAGATCGCTCAATGAGAATATCC
GTTTCGATGAGAACTACGACAAGTGCTTGCAAGAGCTGGGTGAGATCAGC
GATTTCGAGGAGGATCTCGTCTCCGAGATCGAACCCATTGTGGAGATCAG
TTCCTCGGAGGAGATGGTCGAGGAGGAGGAAGGTGGTGGCGGTGGTGCTG
TCGAAGGAGGCGAGGGAGAGGAAGACGATGAAGATTAATCTGCGGCTAAT
GGATATTTTCTTTATTGAACGAATTATTGTAGATTTTTAACGCCTCCATA
TATGAAATTGTTTATAGGATTTACAATTTGGACAATGAATGAAAAAATTT
TAAGTACATAAAAAAAAAAAAAAAAAAA

FI09606.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:05:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG4669-RA 2199 CG4669-RA 89..2150 1..2062 10310 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 15:12:43
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 5227334..5229195 198..2059 9205 99.6 Plus
chr3L 24539361 chr3L 5227089..5227285 1..197 985 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:22:15 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 15:12:41
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 5234770..5236634 198..2062 9325 100 Plus
3L 28110227 3L 5234525..5234721 1..197 985 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:23:20
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 5227870..5229734 198..2062 9325 100 Plus
3L 28103327 3L 5227625..5227821 1..197 985 100 Plus
Blast to na_te.dros performed on 2019-03-15 15:12:41 has no hits.

FI09606.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 15:13:46 Download gff for FI09606.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 5227089..5227285 1..197 100 -> Plus
chr3L 5227334..5229195 198..2059 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:00:24 Download gff for FI09606.complete
Subject Subject Range Query Range Percent Splice Strand
CG4669-RA 1..1836 103..1938 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:07:09 Download gff for FI09606.complete
Subject Subject Range Query Range Percent Splice Strand
CG4669-RA 1..1836 103..1938 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 01:07:07 Download gff for FI09606.complete
Subject Subject Range Query Range Percent Splice Strand
CG4669-RA 1..1836 103..1938 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-09-08 12:18:26 Download gff for FI09606.complete
Subject Subject Range Query Range Percent Splice Strand
CG4669-RA 1..1836 103..1938 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:31:15 Download gff for FI09606.complete
Subject Subject Range Query Range Percent Splice Strand
CG4669-RA 1..1836 103..1938 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:32:15 Download gff for FI09606.complete
Subject Subject Range Query Range Percent Splice Strand
CG4669-RA 47..2105 1..2059 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:07:09 Download gff for FI09606.complete
Subject Subject Range Query Range Percent Splice Strand
CG4669-RA 47..2105 1..2059 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:07:07 Download gff for FI09606.complete
Subject Subject Range Query Range Percent Splice Strand
CG4669-RA 43..2101 1..2059 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-14 11:28:53 Download gff for FI09606.complete
Subject Subject Range Query Range Percent Splice Strand
CG4669-RA 47..2105 1..2059 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:31:15 Download gff for FI09606.complete
Subject Subject Range Query Range Percent Splice Strand
CG4669-RA 43..2101 1..2059 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:13:46 Download gff for FI09606.complete
Subject Subject Range Query Range Percent Splice Strand
3L 5234525..5234721 1..197 100 -> Plus
3L 5234770..5236631 198..2059 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:13:46 Download gff for FI09606.complete
Subject Subject Range Query Range Percent Splice Strand
3L 5234525..5234721 1..197 100 -> Plus
3L 5234770..5236631 198..2059 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 15:13:46 Download gff for FI09606.complete
Subject Subject Range Query Range Percent Splice Strand
3L 5234525..5234721 1..197 100 -> Plus
3L 5234770..5236631 198..2059 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:07:07 Download gff for FI09606.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 5227625..5227821 1..197 100 -> Plus
arm_3L 5227870..5229731 198..2059 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:36:22 Download gff for FI09606.complete
Subject Subject Range Query Range Percent Splice Strand
3L 5227870..5229731 198..2059 100   Plus
3L 5227625..5227821 1..197 100 -> Plus

FI09606.pep Sequence

Translation from 102 to 1937

> FI09606.pep
MANRMRGGACCPSRCQPACPPCPPPGPPCDAPLVRLDKLWPEPYNPCSFK
NCLIFGGHDEPYIRPFDPKGCTRMRRNDIDRSLGYPIGVVSGTTVVKSGI
PNQESVRFASNLKAFAHSYYTRRDEWKPDTIDMVVNEGQVLFNDSENMDP
PNASDSPDIYDENEQKVTRHFKINDIEFAMELEAPFEVYGYENVIRNLRR
ILRAFFKKAKYGVFFTPNWYLLIWKEKGVWMVLDLNGRDKNTMKPNNEEG
YPLLLGLKSFDNVVWLIKKESYLDKNAKFSIREILVVRLATPGSTGQSWE
REHGMRMSQFDVIASDYAYVKSNLHLTLNSKDALRNRSALPVAVATALAS
KIDHPATWDQKMYDKVMCYGVNMCKNCWEPCMDPSKPMDLDDFPRQIRLG
QFVAEIMLTPNAYEGWWKCVPMYKFNDFHLMLEKALDQNDYIIFQINNQM
YSLWKKSDFIYLMDPYRHNIVGRILEEGEDPKSATVRMFGNMDRLLSVFH
QILLESNRSAVFHIHTLRIRNITECPPGTAPALLPPDEDVEVRSLNENIR
FDENYDKCLQELGEISDFEEDLVSEIEPIVEISSSEEMVEEEEGGGGGAV
EGGEGEEDDED*

FI09606.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 01:47:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF23974-PA 614 GF23974-PA 33..590 28..585 2632 84.1 Plus
Dana\GF23714-PA 1104 GF23714-PA 74..590 82..577 1061 43.3 Plus
Dana\GF10279-PA 1740 GF10279-PA 322..738 114..529 239 23 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 01:47:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG15265-PA 610 GG15265-PA 1..578 1..579 2877 94.3 Plus
Dere\GG25362-PA 1176 GG25362-PA 66..606 76..593 1070 43.1 Plus
Dere\GG25362-PB 649 GG25362-PB 66..606 76..593 1064 43.1 Plus
Dere\GG16179-PA 1575 GG16179-PA 160..576 114..529 236 22.9 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 01:47:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH16183-PA 601 GH16183-PA 1..576 1..585 2252 70.2 Plus
Dgri\GH12317-PA 601 GH12317-PA 1..576 1..585 2248 70 Plus
Dgri\GH16943-PA 556 GH16943-PA 38..514 108..584 787 35.3 Plus
Dgri\GH14919-PA 1747 GH14919-PA 320..748 108..533 231 22 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:47:39
Subject Length Description Subject Range Query Range Score Percent Strand
CG4669-PA 611 CG4669-PA 1..611 1..611 3317 100 Plus
ms(3)76Cc-PA 1174 CG9392-PA 58..608 69..595 1038 41.2 Plus
CG32436-PA 1737 CG32436-PA 323..725 114..518 232 22.6 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 01:47:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI13334-PA 602 GI13334-PA 6..567 4..576 2201 69.7 Plus
Dmoj\GI16947-PA 605 GI16947-PA 51..535 108..584 888 38.3 Plus
Dmoj\GI12016-PA 1734 GI12016-PA 317..724 109..518 213 22 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 01:47:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL22649-PA 563 GL22649-PA 40..540 44..580 1947 67.8 Plus
Dper\GL20950-PA 968 GL20950-PA 58..615 59..586 1014 39 Plus
Dper\GL18191-PA 224 GL18191-PA 1..202 388..589 970 86.6 Plus
Dper\GL25490-PA 126 GL25490-PA 38..119 41..123 286 63.9 Plus
Dper\GL24683-PA 2019 GL24683-PA 319..729 108..518 188 20.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 01:47:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA18342-PA 610 GA18342-PA 40..584 44..585 2291 76.7 Plus
Dpse\GA28640-PA 994 GA28640-PA 58..615 59..586 1014 39.2 Plus
Dpse\GA16901-PA 1732 GA16901-PA 319..729 108..518 187 20.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 01:48:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM14700-PA 610 GM14700-PA 1..610 1..611 3218 97.7 Plus
Dsec\GM19622-PA 1003 GM19622-PA 61..604 76..596 1061 41.6 Plus
Dsec\GM22362-PA 1523 GM22362-PA 323..739 114..529 234 23.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 01:48:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD13882-PA 610 GD13882-PA 1..610 1..611 3224 97.7 Plus
Dsim\GD14820-PA 313 GD14820-PA 61..246 76..241 237 33.9 Plus
Dsim\GD14954-PA 1736 GD14954-PA 323..739 114..529 234 23.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 01:48:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ13161-PA 601 GJ13161-PA 4..567 2..576 2257 71.2 Plus
Dvir\GJ13507-PA 940 GJ13507-PA 110..585 108..577 980 41.3 Plus
Dvir\GJ13285-PA 1736 GJ13285-PA 317..725 108..518 229 20.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 01:48:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK16865-PA 595 GK16865-PA 27..561 45..576 2369 79.6 Plus
Dwil\GK13028-PA 943 GK13028-PA 13..577 53..587 943 37.6 Plus
Dwil\GK20472-PA 1752 GK20472-PA 325..727 114..518 212 21.7 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 01:48:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE21488-PA 610 GE21488-PA 1..579 1..580 2843 92.2 Plus
Dyak\GE19617-PA 1154 GE19617-PA 64..585 76..574 1059 43.1 Plus
Dyak\GE23214-PA 1027 GE23214-PA 1..458 133..574 978 44.1 Plus
Dyak\GE19749-PA 1716 GE19749-PA 323..739 114..529 229 22.9 Plus

FI09606.hyp Sequence

Translation from 102 to 1937

> FI09606.hyp
MANRMRGGACCPSRCQPACPPCPPPGPPCDAPLVRLDKLWPEPYNPCSFK
NCLIFGGHDEPYIRPFDPKGCTRMRRNDIDRSLGYPIGVVSGTTVVKSGI
PNQESVRFASNLKAFAHSYYTRRDEWKPDTIDMVVNEGQVLFNDSENMDP
PNASDSPDIYDENEQKVTRHFKINDIEFAMELEAPFEVYGYENVIRNLRR
ILRAFFKKAKYGVFFTPNWYLLIWKEKGVWMVLDLNGRDKNTMKPNNEEG
YPLLLGLKSFDNVVWLIKKESYLDKNAKFSIREILVVRLATPGSTGQSWE
REHGMRMSQFDVIASDYAYVKSNLHLTLNSKDALRNRSALPVAVATALAS
KIDHPATWDQKMYDKVMCYGVNMCKNCWEPCMDPSKPMDLDDFPRQIRLG
QFVAEIMLTPNAYEGWWKCVPMYKFNDFHLMLEKALDQNDYIIFQINNQM
YSLWKKSDFIYLMDPYRHNIVGRILEEGEDPKSATVRMFGNMDRLLSVFH
QILLESNRSAVFHIHTLRIRNITECPPGTAPALLPPDEDVEVRSLNENIR
FDENYDKCLQELGEISDFEEDLVSEIEPIVEISSSEEMVEEEEGGGGGAV
EGGEGEEDDED*

FI09606.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:47:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG4669-PA 611 CG4669-PA 1..611 1..611 3317 100 Plus
ms(3)76Cc-PA 1174 CG9392-PA 58..608 69..595 1038 41.2 Plus
CG32436-PA 1737 CG32436-PA 323..725 114..518 232 22.6 Plus