Clone FI09607 Report

Search the DGRC for FI09607

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:96
Well:7
Vector:pOT2
Associated Gene/TranscriptAlas-RA
Protein status:FI09607.pep: gold
Sequenced Size:1841

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
Alas 2008-12-18 5.12 accounting

Clone Sequence Records

FI09607.complete Sequence

1841 bp assembled on 2008-08-28

GenBank Submission: BT044432.1

> FI09607.complete
AATTTTCGGAACACCTCACTTCGCTTTCAAAGTTCGCTGATTTAGGTCGG
GTCTTCAAAAGTGGAATAGCGCCTCGTCATGCAGTGTCCGTTCTTGAACC
GCTTCACCGCCAGCTTCATCCGCAACTACGCGGAGACGCTGTGCCAATCC
TACGGGAGCCACTGTCCCGTGGTTGGGAAGACCTTGGTATCCGGCGAGAA
GAAACTTTCACTCGTCGCCGCAAGTGTTACAAGGTCTCACTCGACGGGGG
CGAACGCCCACGCCAATGCTGGTGGCCCCGCAACTGCCAACGCCACCGCT
CCCGTCTCCGCCCCCGCCTCTGCCGATCCTGGCAAGGCATCCGCCAAGGA
GACCTTTCCCTACGAGCGCTTCTTCAACGAGCAGATCATGAAGAAGAAGC
GGGACCATTCCTACAGGGTCTTCAAGAAGGTGAACCGCCTGGCAGGCGAC
GGGCTCTTCCCCCACGCCCTGGAGTACTCGGAGCGGACGGAAAAGCCCAT
TACGGTGTGGTGCTCCAATGACTACCTGGGAATGTCCGCCCACCCCGGCG
TCAAGAGGGCCGTCCAGGACGCGCTCAATAGGCACGGATCGGGGGCTGGC
GGCACCAGGAACATTTCGGGTAACTCTCTTCACCACGAGCGCCTCGAGAG
TAAGCTGGCTGAGCTCCACCAGAAGGAGGCTGCGCTGCTGTTCACGTCGT
GCTTCGTGGCCAACGATTCCACTCTCTTTACGCTCGCCAAGCTCTTACCT
GGGTGCGAGATCTTCTCGGACGCAGGGAACCACGCTTCCATGATTATGGG
CATACGGAACAGCGGGGTTCCCAAGCACATCTTCCGGCACAACGACGTGG
ACCACTTGCATCAGCTACTGAAGCAGACGGACAAAAGCGTGCCCAAGATC
GTCGCATTCGAGACGGTACATTCCATGACGGGGGCCATCTGCCCGCTCGA
GGAGCTGCTTGACGTGGCCCACGAGCACGGAGCCATCACGTTCATCGACG
AGGTGCACGCCGTGGGATTGTACGGTGACCACGGGGCCGGGGTCGGTGAG
CGGGATGGTGTGCTGCACAAAATGGACATCATATCGGGCACCCTGGGCAA
GGCGTTCGGTAATATTGGTGGCTACATAGCTGGCACCCATAACCTGGTCG
ACATGATTCGGTCGTATGCGGCCGGTTTCATCTTCACCACCTCACTACCG
CCGACTGTGCTGTGTGGCGCCCTGGAGGCCGTCAACATCCTGGCATCGGA
GGAGGGTCGCCAGCTGCGCCACTTGCACCAACGGAACGTCTCCTACCTGA
AGAGCCTGCTGAAGCGAGAAGGTTTCCCCGTCGAAGAAACGCCCAGCCAC
ATCATTCCCATTAAGATCGGAGACCCTCTGAAGAGCAGTCAAATCTCAAA
CGTGCTGATCGAACAATTCGGACACTACCTGCAGTCGATTAACTACCCAA
CCGTCGCCCGGGGCCAGGAGAAATTGCGGCTGGCCCCCACCCCGTTCCAC
ACTTTCGAAATGATGAACGCCCTGGTTACCGATCTAAAGAAAGTGTGGGA
AATGGTGGACCTCTCTACAAACGTCCCTCTTTCGCCCAACGCATGCATGT
TCTGCAACTCGGAGAGCTGCTGGCACCAGGACACCTCCCCGGATCTGGAG
TGTGGCATTCCCAACTGCCCTCGCCTGGAGATCTCGCTTGCAGCATAGTT
GCCTCTTGGAAACACGACTATAAATGAAGCATTCGAATTATAAAGCTATG
CCTAAATTATCTGTGCGGTTTTGGACAAATAAACAATGGTTTTGGTGCAA
TATACATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

FI09607.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:08:31
Subject Length Description Subject Range Query Range Score Percent Strand
Alas-RA 2245 Alas-RA 117..1926 1..1810 8945 99.6 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 13:47:03
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 19850886..19852208 1..1323 6540 99.6 Plus
chr2R 21145070 chr2R 19852349..19852836 1320..1807 2425 99.8 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:22:16 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 13:47:02
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 23964807..23966129 1..1323 6540 99.6 Plus
2R 25286936 2R 23966270..23966760 1320..1810 2425 99.6 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:26:37
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 23966006..23967328 1..1323 6540 99.6 Plus
2R 25260384 2R 23967469..23967959 1320..1810 2425 99.5 Plus
Blast to na_te.dros performed on 2019-03-16 13:47:02 has no hits.

FI09607.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 13:47:49 Download gff for FI09607.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 19850886..19852206 1..1321 95 -> Plus
chr2R 19852351..19852836 1322..1807 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:00:25 Download gff for FI09607.complete
Subject Subject Range Query Range Percent Splice Strand
Alas-RA 1..1620 79..1698 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:12:26 Download gff for FI09607.complete
Subject Subject Range Query Range Percent Splice Strand
Alas-RA 1..1620 79..1698 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 16:30:37 Download gff for FI09607.complete
Subject Subject Range Query Range Percent Splice Strand
Alas-RA 1..1620 79..1698 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-09-08 12:20:11 Download gff for FI09607.complete
Subject Subject Range Query Range Percent Splice Strand
Alas-RA 1..1620 79..1698 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 11:24:45 Download gff for FI09607.complete
Subject Subject Range Query Range Percent Splice Strand
Alas-RA 1..1620 79..1698 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:10:03 Download gff for FI09607.complete
Subject Subject Range Query Range Percent Splice Strand
Alas-RA 107..1904 1..1798 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:12:26 Download gff for FI09607.complete
Subject Subject Range Query Range Percent Splice Strand
Alas-RA 107..1904 1..1798 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 16:30:37 Download gff for FI09607.complete
Subject Subject Range Query Range Percent Splice Strand
Alas-RA 36..1842 1..1807 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-28 18:07:50 Download gff for FI09607.complete
Subject Subject Range Query Range Percent Splice Strand
Alas-RA 107..1904 1..1798 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:24:45 Download gff for FI09607.complete
Subject Subject Range Query Range Percent Splice Strand
Alas-RA 36..1842 1..1807 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 13:47:49 Download gff for FI09607.complete
Subject Subject Range Query Range Percent Splice Strand
2R 23964807..23966127 1..1321 99 -> Plus
2R 23966272..23966757 1322..1807 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 13:47:49 Download gff for FI09607.complete
Subject Subject Range Query Range Percent Splice Strand
2R 23964807..23966127 1..1321 99 -> Plus
2R 23966272..23966757 1322..1807 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 13:47:49 Download gff for FI09607.complete
Subject Subject Range Query Range Percent Splice Strand
2R 23964807..23966127 1..1321 99 -> Plus
2R 23966272..23966757 1322..1807 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 16:30:37 Download gff for FI09607.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 19852330..19853650 1..1321 99 -> Plus
arm_2R 19853795..19854280 1322..1807 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:42:53 Download gff for FI09607.complete
Subject Subject Range Query Range Percent Splice Strand
2R 23966024..23967344 1..1321 99 -> Plus
2R 23967489..23967974 1322..1807 99   Plus

FI09607.pep Sequence

Translation from 78 to 1697

> FI09607.pep
MQCPFLNRFTASFIRNYAETLCQSYGSHCPVVGKTLVSGEKKLSLVAASV
TRSHSTGANAHANAGGPATANATAPVSAPASADPGKASAKETFPYERFFN
EQIMKKKRDHSYRVFKKVNRLAGDGLFPHALEYSERTEKPITVWCSNDYL
GMSAHPGVKRAVQDALNRHGSGAGGTRNISGNSLHHERLESKLAELHQKE
AALLFTSCFVANDSTLFTLAKLLPGCEIFSDAGNHASMIMGIRNSGVPKH
IFRHNDVDHLHQLLKQTDKSVPKIVAFETVHSMTGAICPLEELLDVAHEH
GAITFIDEVHAVGLYGDHGAGVGERDGVLHKMDIISGTLGKAFGNIGGYI
AGTHNLVDMIRSYAAGFIFTTSLPPTVLCGALEAVNILASEEGRQLRHLH
QRNVSYLKSLLKREGFPVEETPSHIIPIKIGDPLKSSQISNVLIEQFGHY
LQSINYPTVARGQEKLRLAPTPFHTFEMMNALVTDLKKVWEMVDLSTNVP
LSPNACMFCNSESCWHQDTSPDLECGIPNCPRLEISLAA*

FI09607.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 12:06:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF12883-PA 546 GF12883-PA 1..546 1..539 2489 84.7 Plus
Dana\GF24511-PA 411 GF24511-PA 56..389 137..475 538 34.1 Plus
Dana\GF13862-PA 552 GF13862-PA 175..523 146..480 314 28.1 Plus
Dana\GF11943-PA 468 GF11943-PA 101..350 146..386 262 28.6 Plus
Dana\GF18993-PA 557 GF18993-PA 261..543 226..495 213 24.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 12:06:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG22911-PA 537 GG22911-PA 1..537 1..539 2783 96.1 Plus
Dere\GG13887-PA 417 GG13887-PA 62..395 137..475 528 33.8 Plus
Dere\GG25163-PA 592 GG25163-PA 215..592 146..508 322 26.9 Plus
Dere\GG20359-PA 468 GG20359-PA 101..382 146..412 262 28.5 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 12:06:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH20180-PA 541 GH20180-PA 1..541 1..539 2305 79.7 Plus
Dgri\GH16379-PA 420 GH16379-PA 65..398 137..475 528 33.5 Plus
Dgri\GH13758-PA 630 GH13758-PA 179..626 75..504 335 26.7 Plus
Dgri\GH20070-PA 468 GH20070-PA 101..355 146..391 247 28.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:22:14
Subject Length Description Subject Range Query Range Score Percent Strand
Alas-PA 539 CG3017-PA 1..539 1..539 2837 100 Plus
CG10361-PA 417 CG10361-PA 62..395 137..475 522 33.5 Plus
lace-PB 597 CG4162-PB 220..597 146..508 310 26.2 Plus
lace-PA 597 CG4162-PA 220..597 146..508 310 26.2 Plus
Spt-I-PC 468 CG4016-PC 101..382 146..412 250 28.2 Plus
Spt-I-PA 468 CG4016-PA 101..382 146..412 250 28.2 Plus
Spt-I-PB 468 CG4016-PB 101..382 146..412 250 28.2 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 12:06:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI20706-PA 538 GI20706-PA 1..538 1..539 2286 77.7 Plus
Dmoj\GI11571-PA 412 GI11571-PA 57..404 137..489 534 32.8 Plus
Dmoj\GI17899-PA 625 GI17899-PA 192..611 95..495 335 27.3 Plus
Dmoj\GI18787-PA 465 GI18787-PA 98..352 146..391 266 28 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 12:06:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL11642-PA 538 GL11642-PA 1..538 1..539 2471 85.1 Plus
Dper\GL20821-PA 397 GL20821-PA 42..375 137..475 483 32.1 Plus
Dper\GL26430-PA 562 GL26430-PA 185..558 146..504 325 27.5 Plus
Dper\GL16797-PA 468 GL16797-PA 101..355 146..391 269 29.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 12:06:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA15694-PA 538 GA15694-PA 1..538 1..539 2461 84.2 Plus
Dpse\GA10272-PA 417 GA10272-PA 62..395 137..475 526 32.9 Plus
Dpse\GA17997-PA 593 GA17997-PA 216..589 146..504 322 27.5 Plus
Dpse\GA24298-PA 468 GA24298-PA 101..355 146..391 270 29.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 12:06:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM16072-PA 535 GM16072-PA 1..535 1..539 2845 98.7 Plus
Dsec\GM24709-PA 417 GM24709-PA 62..395 137..475 524 33.5 Plus
Dsec\GM16091-PA 597 GM16091-PA 220..597 146..508 323 26.2 Plus
Dsec\GM21446-PA 468 GM21446-PA 101..382 146..412 264 29.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 12:06:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD11815-PA 130 GD11815-PA 6..130 415..539 685 99.2 Plus
Dsim\GD12774-PA 3873 GD12774-PA 3518..3851 137..475 529 33.8 Plus
Dsim\GD24010-PA 597 GD24010-PA 220..597 146..508 321 26.2 Plus
Dsim\GD10944-PA 468 GD10944-PA 101..382 146..412 267 29.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 12:06:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ19743-PA 539 GJ19743-PA 1..539 1..539 2276 77.6 Plus
Dvir\GJ11251-PA 424 GJ11251-PA 69..402 137..475 528 33.5 Plus
Dvir\GJ17404-PA 621 GJ17404-PA 188..607 95..495 322 26.7 Plus
Dvir\GJ21814-PA 465 GJ21814-PA 98..352 146..391 247 27.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 12:06:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK15724-PA 537 GK15724-PA 1..537 1..539 2269 78.2 Plus
Dwil\GK23603-PA 426 GK23603-PA 70..404 137..475 533 34.1 Plus
Dwil\GK18137-PA 621 GK18137-PA 244..617 146..504 327 27 Plus
Dwil\GK21908-PA 467 GK21908-PA 100..349 146..386 248 29 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 12:06:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\Alas-PA 538 GE14349-PA 1..538 1..539 2790 96.5 Plus
Dyak\GE20178-PA 417 GE20178-PA 62..395 137..475 526 33.5 Plus
Dyak\GE21012-PA 599 GE21012-PA 222..599 146..508 316 26.2 Plus
Dyak\GE12518-PA 468 GE12518-PA 101..355 146..391 252 28.8 Plus

FI09607.hyp Sequence

Translation from 78 to 1697

> FI09607.hyp
MQCPFLNRFTASFIRNYAETLCQSYGSHCPVVGKTLVSGEKKLSLVAASV
TRSHSTGANAHANAGGPATANATAPVSAPASADPGKASAKETFPYERFFN
EQIMKKKRDHSYRVFKKVNRLAGDGLFPHALEYSERTEKPITVWCSNDYL
GMSAHPGVKRAVQDALNRHGSGAGGTRNISGNSLHHERLESKLAELHQKE
AALLFTSCFVANDSTLFTLAKLLPGCEIFSDAGNHASMIMGIRNSGVPKH
IFRHNDVDHLHQLLKQTDKSVPKIVAFETVHSMTGAICPLEELLDVAHEH
GAITFIDEVHAVGLYGDHGAGVGERDGVLHKMDIISGTLGKAFGNIGGYI
AGTHNLVDMIRSYAAGFIFTTSLPPTVLCGALEAVNILASEEGRQLRHLH
QRNVSYLKSLLKREGFPVEETPSHIIPIKIGDPLKSSQISNVLIEQFGHY
LQSINYPTVARGQEKLRLAPTPFHTFEMMNALVTDLKKVWEMVDLSTNVP
LSPNACMFCNSESCWHQDTSPDLECGIPNCPRLEISLAA*

FI09607.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:48:01
Subject Length Description Subject Range Query Range Score Percent Strand
Alas-PA 539 CG3017-PA 1..539 1..539 2837 100 Plus
CG10361-PA 417 CG10361-PA 62..395 137..475 522 33.5 Plus
lace-PB 597 CG4162-PB 220..597 146..508 310 26.2 Plus
lace-PA 597 CG4162-PA 220..597 146..508 310 26.2 Plus
Spt-I-PC 468 CG4016-PC 101..382 146..412 250 28.2 Plus