Clone FI09624 Report

Search the DGRC for FI09624

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:96
Well:24
Vector:pOT2
Associated Gene/TranscriptCG3817-RA
Protein status:FI09624.pep: gold
Sequenced Size:898

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG3817 2008-08-15 Release 5.9 accounting
CG3817 2008-12-18 5.12 accounting

Clone Sequence Records

FI09624.complete Sequence

898 bp assembled on 2008-07-29

GenBank Submission: BT044438.1

> FI09624.complete
CCTGCTTGCAAAATATGGCTCTTTTGACTGAGAAGCGTGTTAAAAAGACA
CATGCTCCTGCGAGCGACAGTTCTCCGGAGGAATCCGATTCCGAGGGCAG
CCAGAATTCAGCCAGCGAAGCGGAGGGCAACGCCGGCTGGGCGGATTCCA
TTCAGAAGGTCCTGAAGACCACCAAGCCGAAGACCCAAAAAAAAACCGTG
CTAGCTCGAGCCAAAAAAAGCCAGGCGGCTGTGCGATTCCAGAAAGACGC
CGCCAACAAAAAGCCAGGATTCGATTTCGAGATCGAGAAAGCAGATGTCA
AGGAGGAGGACGAAGGCGATAACCATGAAGACGAGAAGCCGCAGGCCTCT
GCCTTGGATGCCACGCTAACCAAACAGCAGCGTAAGAATGTGCCCCTCCA
GCTGCGTGTGAAGCCCAGTTTCCGGGACATGGAGCGTGAACGAACGCTCC
GCAAAGTTGCCACTCGTGGAGTGGTGCAGTTCTTTAATGCCGTGCGCATT
CAGCAGAAGGATCTGCAGCAGCAGCTGGAGGAAGCGGGTCCGCTGGACAG
CCGACAGGATGCGGTGCTAAACAACATCAACAAGCGAAAGTTTTTGGACG
TCCTGATGAGCGGGAAGCGCGCCAAATCCACACCCGTAGATAACGCTGTA
AAGAAAGAGGAACAAGAAACGGATGACGACGACGAAGACAAGGGCTCCAG
CGGCAAAAAGAAGTCCGAATGGAGTGTGCTGCGCGAGGACTTCATGACCA
ACAAGAAGATCAAGCACTGGGACGAGGAAGACGACGACGAGGAGGGTCAC
AATGATGAAGCTGATGACAGCGATTACGATGATGGGGAAGAATAGCTTTA
ATTACCAAATAAATGTTAGCTTTTCAATTAAAAAAAAAAAAAAAAAAA

FI09624.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:05:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG3817-RA 905 CG3817-RA 27..905 1..879 4395 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 23:39:51
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 10723386..10724264 1..879 4395 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:22:24 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 23:39:49
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 14898739..14899619 1..881 4405 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:23:35
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 14639570..14640450 1..881 4405 100 Plus
Blast to na_te.dros performed on 2019-03-15 23:39:49 has no hits.

FI09624.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 23:40:42 Download gff for FI09624.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 10723386..10724155 1..770 100 == Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:00:39 Download gff for FI09624.complete
Subject Subject Range Query Range Percent Splice Strand
CG3817-RA 1..831 15..845 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:07:36 Download gff for FI09624.complete
Subject Subject Range Query Range Percent Splice Strand
CG3817-RA 1..831 15..845 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:52:14 Download gff for FI09624.complete
Subject Subject Range Query Range Percent Splice Strand
CG3817-RA 1..831 15..845 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-09-08 12:18:35 Download gff for FI09624.complete
Subject Subject Range Query Range Percent Splice Strand
CG3817-RA 1..831 15..845 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:44:52 Download gff for FI09624.complete
Subject Subject Range Query Range Percent Splice Strand
CG3817-RA 1..831 15..845 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 01:32:51 Download gff for FI09624.complete
Subject Subject Range Query Range Percent Splice Strand
CG3817-RA 27..905 1..879 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:07:36 Download gff for FI09624.complete
Subject Subject Range Query Range Percent Splice Strand
CG3817-RA 27..905 1..879 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:52:14 Download gff for FI09624.complete
Subject Subject Range Query Range Percent Splice Strand
CG3817-RA 27..905 1..879 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-29 09:20:08 Download gff for FI09624.complete
Subject Subject Range Query Range Percent Splice Strand
CG3817-RA 27..905 1..879 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:44:52 Download gff for FI09624.complete
Subject Subject Range Query Range Percent Splice Strand
CG3817-RA 1..879 1..879 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:40:42 Download gff for FI09624.complete
Subject Subject Range Query Range Percent Splice Strand
3R 14898739..14899617 1..879 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:40:42 Download gff for FI09624.complete
Subject Subject Range Query Range Percent Splice Strand
3R 14898739..14899617 1..879 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:40:42 Download gff for FI09624.complete
Subject Subject Range Query Range Percent Splice Strand
3R 14898739..14899617 1..879 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:52:14 Download gff for FI09624.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 10724461..10725339 1..879 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:36:56 Download gff for FI09624.complete
Subject Subject Range Query Range Percent Splice Strand
3R 14639570..14640448 1..879 100   Plus

FI09624.pep Sequence

Translation from 2 to 844

> FI09624.pep
CLQNMALLTEKRVKKTHAPASDSSPEESDSEGSQNSASEAEGNAGWADSI
QKVLKTTKPKTQKKTVLARAKKSQAAVRFQKDAANKKPGFDFEIEKADVK
EEDEGDNHEDEKPQASALDATLTKQQRKNVPLQLRVKPSFRDMERERTLR
KVATRGVVQFFNAVRIQQKDLQQQLEEAGPLDSRQDAVLNNINKRKFLDV
LMSGKRAKSTPVDNAVKKEEQETDDDDEDKGSSGKKKSEWSVLREDFMTN
KKIKHWDEEDDDEEGHNDEADDSDYDDGEE*

FI09624.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 18:20:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF17827-PA 286 GF17827-PA 1..261 5..256 907 75.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 18:20:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG16884-PA 276 GG16884-PA 1..263 5..267 1126 89.1 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 18:20:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH18106-PA 289 GH18106-PA 1..262 5..256 739 61.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:43:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG3817-PA 276 CG3817-PA 1..276 5..280 1413 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 18:20:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI24605-PA 272 GI24605-PA 1..251 5..256 690 59.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 18:20:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL22125-PA 279 GL22125-PA 1..266 5..268 841 70.4 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 18:20:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA17706-PA 279 GA17706-PA 1..266 5..268 843 70.4 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 18:20:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM24193-PA 279 GM24193-PA 1..279 5..280 1085 92.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 18:20:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD18985-PA 278 GD18985-PA 1..278 5..280 993 93.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 18:20:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ22554-PA 271 GJ22554-PA 12..248 19..256 628 61.5 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 18:20:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK13497-PA 284 GK13497-PA 1..274 5..272 900 72.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 18:20:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE24265-PA 278 GE24265-PA 1..265 5..267 1003 89.4 Plus

FI09624.hyp Sequence

Translation from 2 to 844

> FI09624.hyp
CLQNMALLTEKRVKKTHAPASDSSPEESDSEGSQNSASEAEGNAGWADSI
QKVLKTTKPKTQKKTVLARAKKSQAAVRFQKDAANKKPGFDFEIEKADVK
EEDEGDNHEDEKPQASALDATLTKQQRKNVPLQLRVKPSFRDMERERTLR
KVATRGVVQFFNAVRIQQKDLQQQLEEAGPLDSRQDAVLNNINKRKFLDV
LMSGKRAKSTPVDNAVKKEEQETDDDDEDKGSSGKKKSEWSVLREDFMTN
KKIKHWDEEDDDEEGHNDEADDSDYDDGEE*

FI09624.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:48:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG3817-PA 276 CG3817-PA 1..276 5..280 1413 100 Plus