Clone FI09630 Report

Search the DGRC for FI09630

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:96
Well:30
Vector:pOT2
Associated Gene/TranscriptCG3773-RA
Protein status:FI09630.pep: gold
Sequenced Size:1247

Clone Sequence Records

FI09630.complete Sequence

1247 bp assembled on 2009-03-02

GenBank Submission: BT071792.1

> FI09630.complete
CCAAAATGGGCGATAATGTGATTCCTGCTCCGCTTAGCCGTATCCCGGGC
ACCAGCCAGGCGAAGGAGAAGCACAGCAAGGACCTGAAGACCCTCACCTA
TCCGCAGCTGCTGGAGATTAAGGACAGGCAGTCTCACTTTCTGTCGTTCA
AAAAGCGTTTGCACCAACTGCCGGACAAGGGAAAGCGTCTGCAGGAGTCG
TACGACAAATTACTGGCCGAGATCAGGAGGCGGGATGAAGTAGAGGAAGC
GACTCGAATGTTGAGCGGTCTCAACATTGTCGAAAAGGGCAAAATTGCTC
TCAACAATCTGGAGTGGAATGGCAGAAACACGGACGAGGGCGCCCATGTG
GACGACATTCTGGACAGCGATGATGAGGTGGAGATGGATCCGCTGCGGAT
TATAGCGCAGGGAACAATGCACGAGAAGAAGGTCAAGGTTTTGCCTCCGC
CAACGAGTTTCATTACGGCAGATGACCTGGCGGATATCGAGGAGTTTAAG
AAACCAACCGACTCCCCAGATTCCGCTTTGGCAGGACATAGTGACACCAG
TTCCCTTCCAGCCGAAATCGTAGAAATCGACGCCAGTCAAGTGGCCGCAA
AGCTGAGCAGGGAGCTGCCTCCCGATCAGCATGCCCTCTACCTCATCGAT
AAGACGGAAACAAATGTGAATACTCCTAGGGAAAAGTTTATGCCATTCCG
CACCACGAAGTCCAATGTCCACAATCCCGACAAGGAGCGCGTGCGCAAAA
AGGGCAAGCATTGGGAAATAACGGCAGCAACTCCGCCACTCATCCAGCAC
AAAGAGGCCCAGTTGGTGCCATTGGCTGAGTCGGCTGCGTTACAGATTGA
TTACATGCAAAGAGTAAAGGAGGTTCGCATTCAGCAGGCTGAACAGCGGC
TGGCCAGGCTTAAAGACTCTCGACTCCGACTTGGCCTGCCCGAGGAATCG
ATTGTGAAAACCAAGGAATCCTTCCGCAACTACCGTGATCCCCAAGACAC
TTTTCTCATCGAAGGCAGGCAAAAAGCCAGCGAAGCGAATGAAGTGCAAG
ATCCAACTGTTCAAGACAGAGGATCGTCCGCCAGTGGCATTCATTACACG
GTGTTCGAGTAACCTGTGGGCAGAGCATGAGATAGAATCTATGCTATTCG
ATTTCCAAGAAACATTGTGTACTATTTATTCGCGTAGGCAACAATTACCA
AATAAGACTGCATACATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

FI09630.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:25:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG3773-RA 1432 CG3773-RA 127..1345 1..1219 5945 99.1 Plus
unc79-RB 8575 unc79-RB 8505..8575 1219..1149 355 100 Minus
unc79-RC 9331 unc79-RC 9261..9331 1219..1149 355 100 Minus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 23:18:23
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 15053649..15054367 152..870 3505 99.2 Plus
chr3R 27901430 chr3R 15054421..15054770 868..1217 1705 99.1 Plus
chr3R 27901430 chr3R 15053431..15053581 1..151 740 99.3 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:22:26 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 23:18:21
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 19229711..19230429 152..870 3505 99.2 Plus
3R 32079331 3R 19230483..19230834 868..1219 1715 99.1 Plus
3R 32079331 3R 19229493..19229643 1..151 740 99.3 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:42:27
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 18970542..18971260 152..870 3505 99.1 Plus
3R 31820162 3R 18971314..18971665 868..1219 1715 99.1 Plus
3R 31820162 3R 18970324..18970474 1..151 740 99.3 Plus
Blast to na_te.dros performed on 2019-03-15 23:18:22 has no hits.

FI09630.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 23:19:06 Download gff for FI09630.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 15053431..15053581 1..151 99 -> Plus
chr3R 15053649..15054366 152..869 99 -> Plus
chr3R 15054423..15054770 870..1217 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 18:06:52 Download gff for FI09630.complete
Subject Subject Range Query Range Percent Splice Strand
CG3773-RA 1..1107 6..1112 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:38:20 Download gff for FI09630.complete
Subject Subject Range Query Range Percent Splice Strand
CG3773-RA 1..1107 6..1112 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:37:32 Download gff for FI09630.complete
Subject Subject Range Query Range Percent Splice Strand
CG3773-RA 1..1107 6..1112 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:28:38 Download gff for FI09630.complete
Subject Subject Range Query Range Percent Splice Strand
CG3773-RA 1..1107 6..1112 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-03-02 15:55:12 Download gff for FI09630.complete
Subject Subject Range Query Range Percent Splice Strand
CG3773-RA 1..1217 1..1217 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:38:20 Download gff for FI09630.complete
Subject Subject Range Query Range Percent Splice Strand
CG3773-RA 1..1217 1..1217 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:37:32 Download gff for FI09630.complete
Subject Subject Range Query Range Percent Splice Strand
CG3773-RA 1..1217 1..1217 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:28:38 Download gff for FI09630.complete
Subject Subject Range Query Range Percent Splice Strand
CG3773-RA 31..1247 1..1217 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:19:06 Download gff for FI09630.complete
Subject Subject Range Query Range Percent Splice Strand
3R 19229493..19229643 1..151 99 -> Plus
3R 19229711..19230428 152..869 99 -> Plus
3R 19230485..19230832 870..1217 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:19:06 Download gff for FI09630.complete
Subject Subject Range Query Range Percent Splice Strand
3R 19229493..19229643 1..151 99 -> Plus
3R 19229711..19230428 152..869 99 -> Plus
3R 19230485..19230832 870..1217 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 23:19:06 Download gff for FI09630.complete
Subject Subject Range Query Range Percent Splice Strand
3R 19229493..19229643 1..151 99 -> Plus
3R 19229711..19230428 152..869 99 -> Plus
3R 19230485..19230832 870..1217 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:37:32 Download gff for FI09630.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 15055215..15055365 1..151 99 -> Plus
arm_3R 15055433..15056150 152..869 99 -> Plus
arm_3R 15056207..15056554 870..1217 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:12:16 Download gff for FI09630.complete
Subject Subject Range Query Range Percent Splice Strand
3R 18970542..18971259 152..869 99 -> Plus
3R 18971316..18971663 870..1217 99   Plus
3R 18970324..18970474 1..151 99 -> Plus

FI09630.pep Sequence

Translation from 2 to 1111

> FI09630.pep
KMGDNVIPAPLSRIPGTSQAKEKHSKDLKTLTYPQLLEIKDRQSHFLSFK
KRLHQLPDKGKRLQESYDKLLAEIRRRDEVEEATRMLSGLNIVEKGKIAL
NNLEWNGRNTDEGAHVDDILDSDDEVEMDPLRIIAQGTMHEKKVKVLPPP
TSFITADDLADIEEFKKPTDSPDSALAGHSDTSSLPAEIVEIDASQVAAK
LSRELPPDQHALYLIDKTETNVNTPREKFMPFRTTKSNVHNPDKERVRKK
GKHWEITAATPPLIQHKEAQLVPLAESAALQIDYMQRVKEVRIQQAEQRL
ARLKDSRLRLGLPEESIVKTKESFRNYRDPQDTFLIEGRQKASEANEVQD
PTVQDRGSSASGIHYTVFE*

FI09630.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 11:14:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF16542-PA 371 GF16542-PA 1..371 2..369 1525 77.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 11:14:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG23195-PA 368 GG23195-PA 1..368 2..369 1780 90.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 11:14:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH22286-PA 366 GH22286-PA 5..366 10..369 1088 58.4 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:09:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG3773-PA 368 CG3773-PA 1..368 2..369 1880 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 11:14:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI23094-PA 370 GI23094-PA 5..370 10..369 1123 58.8 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 11:14:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL12638-PA 374 GL12638-PA 1..374 2..369 1378 72.6 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 11:14:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA17678-PA 374 GA17678-PA 1..374 2..369 1375 72.3 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 11:14:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM26831-PA 329 GM26831-PA 1..329 2..330 1688 97.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 11:14:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD19279-PA 368 GD19279-PA 1..368 2..369 1893 97 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 11:14:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ22715-PA 372 GJ22715-PA 5..372 10..369 1154 61.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 11:14:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK13803-PA 369 GK13803-PA 1..369 2..369 1229 65.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 11:14:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE25591-PA 368 GE25591-PA 1..368 2..369 1807 91.6 Plus
Dyak\GE11206-PA 211 GE11206-PA 1..211 159..369 1016 90.5 Plus

FI09630.hyp Sequence

Translation from 2 to 1111

> FI09630.hyp
KMGDNVIPAPLSRIPGTSQAKEKHSKDLKTLTYPQLLEIKDRQSHFLSFK
KRLHQLPDKGKRLQESYDKLLAEIRRRDEVEEATRMLSGLNIVEKGKIAL
NNLEWNGRNTDEGAHVDDILDSDDEVEMDPLRIIAQGTMHEKKVKVLPPP
TSFITADDLADIEEFKKPTDSPDSALAGHSDTSSLPAEIVEIDASQVAAK
LSRELPPDQHALYLIDKTETNVNTPREKFMPFRTTKSNVHNPDKERVRKK
GKHWEITAATPPLIQHKEAQLVPLAESAALQIDYMQRVKEVRIQQAEQRL
ARLKDSRLRLGLPEESIVKTKESFRNYRDPQDTFLIEGRQKASEANEVQD
PTVQDRGSSASGIHYTVFE*

FI09630.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:48:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG3773-PA 368 CG3773-PA 1..368 2..369 1880 100 Plus