Clone FI09636 Report

Search the DGRC for FI09636

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:96
Well:36
Vector:pOT2
Associated Gene/TranscriptCG17224-RA
Protein status:FI09636.pep: gold
Sequenced Size:1251

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG17224 2008-12-18 5.12 accounting

Clone Sequence Records

FI09636.complete Sequence

1251 bp assembled on 2008-08-28

GenBank Submission: BT044440.1

> FI09636.complete
TGCAGCCGGGCGTAGGTGTTGATTTGTTGTGGTGTTGATTTTTATCAAAT
ATACAAATACATGTGGTTCTAAATGACACACCCCTATCTTTGTATAAAAC
GTATATTTATATAAATACATTTCTTGGTACTATCTGAAAATGTGCAAACA
AAAGCTTACTGAACATGTAGACAAAATTGAAAGATTTCAGACTTTTATCC
ACGTTTAACTGGAACCACCGACGACGAATCAACTCAAAATGTCTGATAAA
ACCGTCGAGTTGATGAATCCCCATTTGGAAACAGCACGATCGGATTATTT
ATACCACCTGGACATCAATGTGGCCAATACCCGAGACACCAGTGAGTTAC
AGAATAGGTTCGGCGATGTTAGGGTCATCTGCATGGGTGGAACGGGCTCC
AGAATGCGGCAGTTAGCCCTTTACCTAAGAGATATTCTGGTAGTGTCGGA
GTCCGGCGATCCGGTGGATTTGTGCGAGCGTGGCAACCGATATGCCATGT
ACAAGGTGGGTCCGGTACTGTGCGTGAGCCACGGCGTTGGATCCTCCTCC
TTCAGTGTCGTGCTGCACGAGCTGATCAAGCTCCTCAAATATGCGCGGTG
CCAGGACCCCGTCCTGCTTCGGATTGGCACCTGCGGAGGACTTGGCGTCC
CTCCCGGCACAGTGGTGGCCAGCAAAAATGCCTTCAATGGTCTGCTGCGC
AACGAGCATGAAATCGCTATTCTCGGACAGCGAGTGGTGCGTCCGGCTCA
GTTTTCCGAGGACGTGATCAGGGATTTACTTGCATTCGGTGTCGACGCCA
ACGACGGATTTCAGACCATAAGTGCCAACACAATGGGAACAGATTGCTTT
TACGAAGGTCAAGGTCGCACCGATGGAGCCATATGCGAGTACTCGGAGAA
GGATAAGATGGAGTTCTTGCAGAAGTGCCACGATCTGGGAATCCGGAACA
TCGAGATGGAGGCCAGCATGTTCGCCTCCGTCACCCAAAAAGTGGGGGTC
AAAGCAGGCGATGTATGCGTGACCCTGATCGATCGCCTAAAGGGAGATCA
GATTACTATTACTATTGACCAGAAGCACGAATTCGAGCAGCGTCCCTTTT
TCGTCGTGGGTCGCTACATTAAGAGGTTACTGCAGCAGTGAATCCTCTAG
AATAACACATCTTCTTTGAAGTTTTACAATATTGGATTACAATAAAACTG
CATGCTGCACTTTGCTCTGTGCCATTCCAGCTAAAAAAAAAAAAAAAAAA
A

FI09636.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:08:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG17224-RB 1476 CG17224-RB 47..1280 1..1234 6110 99.6 Plus
CG17224.d 1358 CG17224.d 141..1205 170..1234 5280 99.7 Plus
CG17224-RA 1427 CG17224-RA 222..1274 182..1234 5220 99.7 Plus
CG17224-RA 1427 CG17224-RA 16..144 1..129 645 100 Plus
CG17224.d 1358 CG17224.d 16..141 1..126 630 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 20:37:58
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 3017009..3017352 716..373 1705 99.7 Minus
chr2L 23010047 chr2L 3016552..3016747 1051..856 980 100 Minus
chr2L 23010047 chr2L 3016311..3016495 1232..1048 925 100 Minus
chr2L 23010047 chr2L 3016803..3016946 859..716 720 100 Minus
chr2L 23010047 chr2L 3017787..3017915 129..1 645 100 Minus
chr2L 23010047 chr2L 3017404..3017529 375..250 630 100 Minus
chr2L 23010047 chr2L 3017585..3017708 249..126 620 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:22:27 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 20:37:56
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 3017383..3017726 716..373 1675 99.1 Minus
2L 23513712 2L 3016926..3017121 1051..856 980 100 Minus
2L 23513712 2L 3016683..3016869 1234..1048 935 100 Minus
2L 23513712 2L 3017177..3017320 859..716 720 100 Minus
2L 23513712 2L 3018161..3018289 129..1 645 100 Minus
2L 23513712 2L 3017778..3017903 375..250 630 100 Minus
2L 23513712 2L 3017959..3018082 249..126 605 99.2 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:26:41
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 3017383..3017726 716..373 1675 99.1 Minus
2L 23513712 2L 3016926..3017121 1051..856 980 100 Minus
2L 23513712 2L 3016683..3016869 1234..1048 935 100 Minus
2L 23513712 2L 3017177..3017320 859..716 720 100 Minus
2L 23513712 2L 3018161..3018289 129..1 645 100 Minus
2L 23513712 2L 3017778..3017903 375..250 630 100 Minus
2L 23513712 2L 3017959..3018082 249..126 605 99.1 Minus
Blast to na_te.dros performed on 2019-03-16 20:37:57 has no hits.

FI09636.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 20:38:45 Download gff for FI09636.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 3016311..3016491 1052..1232 100 <- Minus
chr2L 3016552..3016745 858..1051 100 <- Minus
chr2L 3016805..3016946 716..857 100 <- Minus
chr2L 3017010..3017351 374..715 99 <- Minus
chr2L 3017406..3017529 250..373 100 <- Minus
chr2L 3017585..3017707 127..249 100 <- Minus
chr2L 3017790..3017915 1..126 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:00:41 Download gff for FI09636.complete
Subject Subject Range Query Range Percent Splice Strand
CG17224-RB 1..903 239..1141 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:12:33 Download gff for FI09636.complete
Subject Subject Range Query Range Percent Splice Strand
CG17224-RC 1..903 239..1141 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:11:51 Download gff for FI09636.complete
Subject Subject Range Query Range Percent Splice Strand
CG17224-RB 1..903 239..1141 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-09-08 12:20:13 Download gff for FI09636.complete
Subject Subject Range Query Range Percent Splice Strand
CG17224-RB 1..903 239..1141 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:08:30 Download gff for FI09636.complete
Subject Subject Range Query Range Percent Splice Strand
CG17224-RB 1..903 239..1141 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:10:11 Download gff for FI09636.complete
Subject Subject Range Query Range Percent Splice Strand
CG17224-RB 1..1232 1..1232 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:12:32 Download gff for FI09636.complete
Subject Subject Range Query Range Percent Splice Strand
CG17224-RB 16..1247 1..1232 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:11:51 Download gff for FI09636.complete
Subject Subject Range Query Range Percent Splice Strand
CG17224-RB 20..1251 1..1232 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-28 18:08:03 Download gff for FI09636.complete
Subject Subject Range Query Range Percent Splice Strand
CG17224-RB 1..1232 1..1232 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:08:30 Download gff for FI09636.complete
Subject Subject Range Query Range Percent Splice Strand
CG17224-RB 20..1251 1..1232 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 20:38:45 Download gff for FI09636.complete
Subject Subject Range Query Range Percent Splice Strand
2L 3017384..3017725 374..715 99 <- Minus
2L 3017780..3017903 250..373 100 <- Minus
2L 3017959..3018081 127..249 99 <- Minus
2L 3016685..3016865 1052..1232 100 <- Minus
2L 3016926..3017119 858..1051 100 <- Minus
2L 3017179..3017320 716..857 100 <- Minus
2L 3018164..3018289 1..126 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 20:38:45 Download gff for FI09636.complete
Subject Subject Range Query Range Percent Splice Strand
2L 3017384..3017725 374..715 99 <- Minus
2L 3017780..3017903 250..373 100 <- Minus
2L 3017959..3018081 127..249 99 <- Minus
2L 3016685..3016865 1052..1232 100 <- Minus
2L 3016926..3017119 858..1051 100 <- Minus
2L 3017179..3017320 716..857 100 <- Minus
2L 3018164..3018289 1..126 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 20:38:45 Download gff for FI09636.complete
Subject Subject Range Query Range Percent Splice Strand
2L 3017384..3017725 374..715 99 <- Minus
2L 3017780..3017903 250..373 100 <- Minus
2L 3017959..3018081 127..249 99 <- Minus
2L 3016685..3016865 1052..1232 100 <- Minus
2L 3016926..3017119 858..1051 100 <- Minus
2L 3017179..3017320 716..857 100 <- Minus
2L 3018164..3018289 1..126 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:11:51 Download gff for FI09636.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 3016926..3017119 858..1051 100 <- Minus
arm_2L 3017179..3017320 716..857 100 <- Minus
arm_2L 3016685..3016865 1052..1232 100 <- Minus
arm_2L 3017384..3017725 374..715 99 <- Minus
arm_2L 3017780..3017903 250..373 100 <- Minus
arm_2L 3017959..3018081 127..249 99 <- Minus
arm_2L 3018164..3018289 1..126 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:43:00 Download gff for FI09636.complete
Subject Subject Range Query Range Percent Splice Strand
2L 3017384..3017725 374..715 99 <- Minus
2L 3017780..3017903 250..373 100 <- Minus
2L 3017959..3018081 127..249 99 <- Minus
2L 3018164..3018289 1..126 100   Minus
2L 3016685..3016865 1052..1232 100 <- Minus
2L 3016926..3017119 858..1051 100 <- Minus
2L 3017179..3017320 716..857 100 <- Minus

FI09636.hyp Sequence

Translation from 238 to 1140

> FI09636.hyp
MSDKTVELMNPHLETARSDYLYHLDINVANTRDTSELQNRFGDVRVICMG
GTGSRMRQLALYLRDILVVSESGDPVDLCERGNRYAMYKVGPVLCVSHGV
GSSSFSVVLHELIKLLKYARCQDPVLLRIGTCGGLGVPPGTVVASKNAFN
GLLRNEHEIAILGQRVVRPAQFSEDVIRDLLAFGVDANDGFQTISANTMG
TDCFYEGQGRTDGAICEYSEKDKMEFLQKCHDLGIRNIEMEASMFASVTQ
KVGVKAGDVCVTLIDRLKGDQITITIDQKHEFEQRPFFVVGRYIKRLLQQ
*

FI09636.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:48:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG17224-PD 300 CG17224-PD 1..300 1..300 1555 100 Plus
CG17224-PC 300 CG17224-PC 1..300 1..300 1555 100 Plus
CG17224-PB 300 CG17224-PB 1..300 1..300 1555 100 Plus
CG17224-PA 300 CG17224-PA 1..300 1..300 1555 100 Plus
CG6330-PB 347 CG6330-PB 21..314 2..298 693 45.2 Plus

FI09636.pep Sequence

Translation from 238 to 1140

> FI09636.pep
MSDKTVELMNPHLETARSDYLYHLDINVANTRDTSELQNRFGDVRVICMG
GTGSRMRQLALYLRDILVVSESGDPVDLCERGNRYAMYKVGPVLCVSHGV
GSSSFSVVLHELIKLLKYARCQDPVLLRIGTCGGLGVPPGTVVASKNAFN
GLLRNEHEIAILGQRVVRPAQFSEDVIRDLLAFGVDANDGFQTISANTMG
TDCFYEGQGRTDGAICEYSEKDKMEFLQKCHDLGIRNIEMEASMFASVTQ
KVGVKAGDVCVTLIDRLKGDQITITIDQKHEFEQRPFFVVGRYIKRLLQQ
*

FI09636.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 12:05:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF18560-PA 300 GF18560-PA 4..299 5..300 1165 75 Plus
Dana\GF18559-PA 368 GF18559-PA 42..337 2..300 676 46.8 Plus
Dana\GF11317-PA 383 GF11317-PA 59..346 9..298 655 43.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 12:05:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG24468-PA 308 GG24468-PA 12..308 4..300 1439 88.9 Plus
Dere\GG12162-PA 368 GG12162-PA 42..335 2..298 633 44.5 Plus
Dere\GG20084-PA 378 GG20084-PA 56..343 9..298 612 40.4 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 12:05:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH19395-PA 301 GH19395-PA 7..301 6..300 1130 67.8 Plus
Dgri\GH19373-PA 346 GH19373-PA 20..315 2..300 732 46.2 Plus
Dgri\GH19384-PA 350 GH19384-PA 50..337 9..298 672 43.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:16:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG17224-PD 300 CG17224-PD 1..300 1..300 1555 100 Plus
CG17224-PC 300 CG17224-PC 1..300 1..300 1555 100 Plus
CG17224-PB 300 CG17224-PB 1..300 1..300 1555 100 Plus
CG17224-PA 300 CG17224-PA 1..300 1..300 1555 100 Plus
CG6330-PB 347 CG6330-PB 21..314 2..298 693 45.2 Plus
CG6330-PA 368 CG6330-PA 42..335 2..298 693 45.2 Plus
CG3788-PB 378 CG3788-PB 56..343 9..298 596 40.4 Plus
CG3788-PA 378 CG3788-PA 56..343 9..298 596 40.4 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 12:05:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI22213-PA 297 GI22213-PA 5..297 7..299 1124 67.9 Plus
Dmoj\GI22212-PA 363 GI22212-PA 37..332 2..300 731 46.5 Plus
Dmoj\GI22215-PA 360 GI22215-PA 53..340 9..298 663 42.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 12:05:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL27260-PA 297 GL27260-PA 3..297 4..300 1180 71.4 Plus
Dper\GL27259-PA 365 GL27259-PA 39..332 2..298 738 47.5 Plus
Dper\GL23743-PA 373 GL23743-PA 53..344 3..296 635 40.5 Plus
Dper\GL25985-PA 256 GL25985-PA 1..236 56..298 521 40.7 Plus
Dper\GL25965-PA 223 GL25965-PA 70..215 2..150 365 48 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 12:05:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA27021-PA 297 GA27021-PA 3..297 4..300 1188 71.4 Plus
Dpse\GA19516-PB 347 GA19516-PB 21..314 2..298 738 47.5 Plus
Dpse\GA19516-PA 365 GA19516-PA 39..332 2..298 738 47.5 Plus
Dpse\GA26722-PA 373 GA26722-PA 53..344 3..296 635 40.5 Plus
Dpse\GA23650-PA 377 GA23650-PA 63..353 5..298 602 40.4 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 12:05:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM18176-PA 300 GM18176-PA 1..300 1..300 1562 96.7 Plus
Dsec\GM10155-PA 347 GM10155-PA 21..314 2..298 714 45.2 Plus
Dsec\GM15599-PA 378 GM15599-PA 56..343 9..298 614 40.4 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 12:05:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD12000-PA 279 GD12000-PA 1..272 1..272 1397 96 Plus
Dsim\GD18110-PA 347 GD18110-PA 21..314 2..298 714 45.2 Plus
Dsim\GD25095-PA 378 GD25095-PA 56..343 9..298 617 40.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 12:05:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ24336-PA 299 GJ24336-PA 3..297 4..298 1116 67.1 Plus
Dvir\GJ24335-PA 303 GJ24335-PA 3..283 18..298 1026 64.4 Plus
Dvir\GJ24332-PA 346 GJ24332-PA 20..315 2..300 738 47.2 Plus
Dvir\GJ24333-PA 343 GJ24333-PA 30..323 3..298 689 43.6 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 12:05:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK11446-PA 299 GK11446-PA 3..299 4..299 1159 69 Plus
Dwil\GK11445-PA 368 GK11445-PA 42..337 2..300 746 47.2 Plus
Dwil\GK15591-PA 371 GK15591-PA 52..343 3..296 638 40.2 Plus
Dwil\GK11364-PA 363 GK11364-PA 55..344 6..298 606 39.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 12:05:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE14961-PA 300 GE14961-PA 1..300 1..300 1454 88.3 Plus
Dyak\GE10606-PA 347 GE10606-PA 21..314 2..298 645 45.2 Plus
Dyak\GE11621-PA 382 GE11621-PA 56..343 9..298 601 39.7 Plus