Clone FI09727 Report

Search the DGRC for FI09727

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:97
Well:27
Vector:pOT2
Associated Gene/TranscriptVhaAC39-2-RA
Protein status:FI09727.pep: gold
Sequenced Size:1281

Clone Sequence Records

FI09727.complete Sequence

1281 bp assembled on 2009-03-09

GenBank Submission: BT072817.1

> FI09727.complete
ATTTCTGCTTTCACTTAAAAGTTGCCTGGCGTGTGAATTCCTACTAATAG
ATAGCTCGAAAATAATAATAAGTCAAAATGTCGATGATATTCAACACGGA
GTATGGCTACCTGGAGGCCCTAACGCGCGGATTCAAGAACGGCATGCTAA
AGCACTCGGACTATCTAAATCTGACCCAGTGTGAATCCCTCGAGGACGTA
ATGATCAGCATCCAGGGCACGGATTACGGTCTCATCTTTGGTGGCGAACA
ATCAGCGCCGTCCGTTGAGGTGATCGAAAGATGCCTTAGGGATCGTCTGC
TGCAGCAATACTACTACATACGCAGTCATTCGACGGAGCCGCTGACCACC
TTTATGGAGTTCATACGATATCCGTTCATGATCGATAATGTGGCGCTTCT
GGTCGCTGGCCTAAACAATCACCGATCCATGAAGCGTCTGCTAAGAATGT
GTCATCCGCTGGGCGAATTCGATCAACTGGGCGCCATCGAAGTGGCCTCG
AATTCTGCGGAGCTCTTCGACGCCGTTCTAATTGACACGCCCATCGCTCG
GTTTGTGCCACGCGATTTGCCCATGGAGTCGTTGCGTTACCTCGACGTGG
AGATTGTGCGTGCCCATCTGTATCGTGCTTATTTGGAGAAATTCTACGCC
TATTGCAGCCAACTGGGCGGCAATACCGCCAACGTGATGACCAATCTATT
GTCCTTCGAGGCGGATCGTCGGACCATTACAATAGCTGTGAACGCTATTG
GCAGTGATATCATACCGAAGGAGCGTCTAAAGATGTTCCCCACCTGTGGC
TACCTGCCCAAAATAGCCTTGGCCTCCATGTCCACTTTAAATGATACGGA
TAAAATAAGGGATGTTTGCAATGTGTTCGATGGCTATGGCAAAATGTTTG
ACAATTTGGAGCGCGACTCGGACGGCATGATTACGCTGGAGGACCGCTTT
CTCATGATGGAGGCCAAGAAGAATGTGCAGACCTTCCTGCAGCAGTACCA
TTTCGGGATCTTCTACTCGTTCATTAAACTTAAACAGTTGGAGGTACGCA
ATATCGTCTGGATTAGCGAATGCATAGCGCAGCGACAGACGGACAGAATC
AACGCCTTCATTCCCATACCCTTGGACTAGAAACGCTTTTGCTTTCCTTC
TTCGAAATGTTTTCCCTTTGAAATGTGTGTTATAATATATAGGCGTTGTT
ATAAATAAAACACATGCATAACAATTTCGCATTAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

FI09727.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:25:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG4624-RA 1376 CG4624-RA 48..1282 1..1235 6175 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-17 00:13:54
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 18981996..18982759 763..1 3575 98.2 Minus
chr3R 27901430 chr3R 18981459..18981932 1233..760 2310 99.2 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:22:31 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-17 00:13:52
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 23158554..23159316 763..1 3815 100 Minus
3R 32079331 3R 23158015..23158490 1235..760 2365 99.8 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:42:45
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 22899385..22900147 763..1 3815 100 Minus
3R 31820162 3R 22898846..22899321 1235..760 2365 99.7 Minus
Blast to na_te.dros performed on 2019-03-17 00:13:52 has no hits.

FI09727.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-17 00:14:59 Download gff for FI09727.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 18981459..18981928 764..1233 99 <- Minus
chr3R 18981996..18982759 1..763 98   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 17:51:35 Download gff for FI09727.complete
Subject Subject Range Query Range Percent Splice Strand
CG4624-RA 1..1053 78..1130 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:38:50 Download gff for FI09727.complete
Subject Subject Range Query Range Percent Splice Strand
VhaAC39-2-RA 1..1053 78..1130 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 18:32:19 Download gff for FI09727.complete
Subject Subject Range Query Range Percent Splice Strand
VhaAC39-2-RA 1..1053 78..1130 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 17:14:38 Download gff for FI09727.complete
Subject Subject Range Query Range Percent Splice Strand
VhaAC39-2-RA 1..1053 78..1130 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-03-09 12:48:42 Download gff for FI09727.complete
Subject Subject Range Query Range Percent Splice Strand
CG4624-RA 1..1233 1..1233 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:38:50 Download gff for FI09727.complete
Subject Subject Range Query Range Percent Splice Strand
VhaAC39-2-RA 1..1233 1..1233 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 18:32:19 Download gff for FI09727.complete
Subject Subject Range Query Range Percent Splice Strand
VhaAC39-2-RA 1..1233 1..1233 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 17:14:38 Download gff for FI09727.complete
Subject Subject Range Query Range Percent Splice Strand
VhaAC39-2-RA 1..1233 1..1233 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 00:14:59 Download gff for FI09727.complete
Subject Subject Range Query Range Percent Splice Strand
3R 23158017..23158486 764..1233 100 <- Minus
3R 23158554..23159316 1..763 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 00:14:59 Download gff for FI09727.complete
Subject Subject Range Query Range Percent Splice Strand
3R 23158017..23158486 764..1233 100 <- Minus
3R 23158554..23159316 1..763 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-17 00:14:59 Download gff for FI09727.complete
Subject Subject Range Query Range Percent Splice Strand
3R 23158017..23158486 764..1233 100 <- Minus
3R 23158554..23159316 1..763 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 18:32:19 Download gff for FI09727.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 18983739..18984208 764..1233 100 <- Minus
arm_3R 18984276..18985038 1..763 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:12:49 Download gff for FI09727.complete
Subject Subject Range Query Range Percent Splice Strand
3R 22898848..22899317 764..1233 100 <- Minus
3R 22899385..22900147 1..763 100   Minus

FI09727.hyp Sequence

Translation from 77 to 1129

> FI09727.hyp
MSMIFNTEYGYLEALTRGFKNGMLKHSDYLNLTQCESLEDVMISIQGTDY
GLIFGGEQSAPSVEVIERCLRDRLLQQYYYIRSHSTEPLTTFMEFIRYPF
MIDNVALLVAGLNNHRSMKRLLRMCHPLGEFDQLGAIEVASNSAELFDAV
LIDTPIARFVPRDLPMESLRYLDVEIVRAHLYRAYLEKFYAYCSQLGGNT
ANVMTNLLSFEADRRTITIAVNAIGSDIIPKERLKMFPTCGYLPKIALAS
MSTLNDTDKIRDVCNVFDGYGKMFDNLERDSDGMITLEDRFLMMEAKKNV
QTFLQQYHFGIFYSFIKLKQLEVRNIVWISECIAQRQTDRINAFIPIPLD
*

FI09727.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:48:59
Subject Length Description Subject Range Query Range Score Percent Strand
VhaAC39-2-PA 350 CG4624-PA 1..350 1..350 1812 100 Plus
VhaAC39-1-PA 350 CG2934-PA 7..349 4..347 863 46.2 Plus

FI09727.pep Sequence

Translation from 77 to 1129

> FI09727.pep
MSMIFNTEYGYLEALTRGFKNGMLKHSDYLNLTQCESLEDVMISIQGTDY
GLIFGGEQSAPSVEVIERCLRDRLLQQYYYIRSHSTEPLTTFMEFIRYPF
MIDNVALLVAGLNNHRSMKRLLRMCHPLGEFDQLGAIEVASNSAELFDAV
LIDTPIARFVPRDLPMESLRYLDVEIVRAHLYRAYLEKFYAYCSQLGGNT
ANVMTNLLSFEADRRTITIAVNAIGSDIIPKERLKMFPTCGYLPKIALAS
MSTLNDTDKIRDVCNVFDGYGKMFDNLERDSDGMITLEDRFLMMEAKKNV
QTFLQQYHFGIFYSFIKLKQLEVRNIVWISECIAQRQTDRINAFIPIPLD
*

FI09727.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 12:00:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF18027-PA 350 GF18027-PA 1..349 1..350 1442 75.4 Plus
Dana\GF21182-PA 350 GF21182-PA 5..349 2..347 894 46.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 12:00:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG12455-PA 350 GG12455-PA 1..350 1..350 1737 91.7 Plus
Dere\GG18679-PA 350 GG18679-PA 5..349 2..347 894 46.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 12:00:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH21449-PA 351 GH21449-PA 7..350 5..349 1069 56.2 Plus
Dgri\GH17612-PA 352 GH17612-PA 5..349 2..347 881 45.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:16:18
Subject Length Description Subject Range Query Range Score Percent Strand
VhaAC39-2-PA 350 CG4624-PA 1..350 1..350 1812 100 Plus
VhaAC39-1-PA 350 CG2934-PA 7..349 4..347 863 46.2 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 12:00:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI10510-PA 351 GI10510-PA 4..350 2..349 1044 53.4 Plus
Dmoj\GI16480-PA 350 GI16480-PA 5..349 2..347 895 46.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 12:00:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL23045-PA 348 GL23045-PA 1..348 1..350 1303 67.1 Plus
Dper\GL14761-PA 350 GL14761-PA 5..349 2..347 894 46.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 12:00:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA18311-PA 348 GA18311-PA 1..348 1..350 1306 67.1 Plus
Dpse\GA15530-PA 350 GA15530-PA 5..349 2..347 894 46.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 12:00:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM23587-PA 350 GM23587-PA 1..350 1..350 1850 98.3 Plus
Dsec\GM12314-PA 350 GM12314-PA 5..349 2..347 889 46 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 12:00:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD18401-PA 368 GD18401-PA 1..327 1..327 1698 96.9 Plus
Dsim\GD16660-PA 215 GD16660-PA 7..212 4..209 557 49 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 12:00:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ23190-PA 352 GJ23190-PA 4..351 2..349 1119 57.2 Plus
Dvir\GJ16024-PA 350 GJ16024-PA 5..349 2..347 895 46.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 12:00:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK22588-PA 353 GK22588-PA 4..352 2..350 1241 62.5 Plus
Dwil\GK10228-PA 350 GK10228-PA 5..349 2..347 894 46.2 Plus
Dwil\GK16475-PA 350 GK16475-PA 5..349 2..347 883 45.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 12:00:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE23978-PA 350 GE23978-PA 1..350 1..350 1729 92 Plus
Dyak\GE16319-PA 350 GE16319-PA 5..349 2..347 894 46.2 Plus