Clone FI09828 Report

Search the DGRC for FI09828

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:98
Well:28
Vector:pOT2
Associated Gene/TranscriptCG10268-RA
Protein status:FI09828.pep: gold
Sequenced Size:1176

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG10268 2008-12-18 5.12 accounting

Clone Sequence Records

FI09828.complete Sequence

1176 bp assembled on 2008-08-28

GenBank Submission: BT044444.1

> FI09828.complete
CGACTTGGAGCACAGACTTCGAATGGAGCATTAGCATAAACACAACAGGC
CGGAGTGCCGGAGTCAAGTGGCAGGGCCCAGGGTGAACACAACCACATCC
AGTATCTGATGAGCACAGCGTAGAACTTAGGAAATCGAGGCCACAAGCAG
AAGCAGCAGGAGAAGCAGCGGTTGTGAAAGAAGTGGGCGAGCAAAAGTGA
AAGTTGCGCCAGAAAAATGATGAAAATTGTACTCATCAGCGGCAAGCGAA
AGTGCGGCAAGGATTACATATCCGAGAGGCTGCAGCGGAGATTGGGCTCC
CGGTCGTGTATCGTTCGAATCTCAGAGCCCATTAAGTCGGAATGGGCTCG
CAAGCTGCAGTTGGACCTGGACGCTCTCCTCGGTGATGGACCCTACAAGG
AGAAGTACCGGCGCGACATGATTGTGTGGAGCGACGAGGTGCGGGCCCAG
GACTACGGCTACTTCTGCCGCGTGGCCATGGAGGAGGCGCTGAGTCGCCA
GCAGACGCCCTACATTCTTGTCAGCGATGTGCGGCGCAAGAACGACATCA
GGTGGTTCCGGGAGACTTACGGGCCGGAACGAGTCATCACCTTGCGTCTA
ACATCCCGTCCAGAAACGCGGTCTGCACGGGGATGGACCTTTACCGCAGG
AATAGACGATGTTCCCTCCGAGTGCGATCTGGATGATCTGGCCGACGGCT
TCGACGTGGTGTTGGCCAACGACGAGGAACTCGACCAGGAGGCCATCGAC
ATTCTGCTGGATAGGCTGCAGCTGCAGTATCGATAGAGCTTGGACCTCTC
GGCTCACCATGCTTTGAACAAATGTATTTTTGATATATCACGTATTCCGG
TCACAAATAGCGTAGTTAATGCAATACACTAGACAAGAATGAAGTTACGT
ACCTAATAGTAAATACTCTTGGTAACGAAATAGAGCTTGTGTGGCGGTTT
TACTAACTCGCAACGTTTAAGACTTAATAGATTCAATGGATATACAAACT
ATATGTCGCTGATTATCGGTAATAGGTTACTTCAGGAATAAATAGCCCGG
TTTCCAAATGTTAGAATAATACTCATGAGCAAACTGCATCCATCAATTTA
TGTGCACAATGTACTGGCAAGCAAACTAATAAAATGATTTATTAAAAGAT
GAAAAAAAAAAAAAAAAAAAAAAAAA

FI09828.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:07:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG10268-RA 1242 CG10268-RA 88..1239 1..1152 5700 99.6 Plus
msb1l-RA 1438 msb1l-RA 1385..1438 1152..1099 270 100 Minus
msb1l.a 1183 msb1l.a 1144..1183 1152..1113 200 100 Minus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 04:59:50
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 19577628..19578490 1151..289 4285 99.8 Minus
chr2L 23010047 chr2L 19578592..19578881 290..1 1435 99.7 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:22:35 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 04:59:48
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 19579092..19579955 1152..289 4290 99.8 Minus
2L 23513712 2L 19580057..19580346 290..1 1420 99.3 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:26:07
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 19579092..19579955 1152..289 4290 99.7 Minus
2L 23513712 2L 19580057..19580346 290..1 1420 99.3 Minus
Blast to na_te.dros performed 2019-03-16 04:59:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\Uvir 6564 Dvir\Uvir VIRUVIR 6564bp 4468..4547 103..183 114 61.7 Plus

FI09828.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 05:01:03 Download gff for FI09828.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 19577628..19578488 291..1151 99 <- Minus
chr2L 19578592..19578881 1..290 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:00:59 Download gff for FI09828.complete
Subject Subject Range Query Range Percent Splice Strand
CG10268-RA 1..570 217..786 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:11:38 Download gff for FI09828.complete
Subject Subject Range Query Range Percent Splice Strand
CG10268-RA 1..570 217..786 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:10:14 Download gff for FI09828.complete
Subject Subject Range Query Range Percent Splice Strand
CG10268-RA 1..570 217..786 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-09-08 12:19:52 Download gff for FI09828.complete
Subject Subject Range Query Range Percent Splice Strand
CG10268-RA 1..570 217..786 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 05:56:53 Download gff for FI09828.complete
Subject Subject Range Query Range Percent Splice Strand
CG10268-RA 1..570 217..786 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 02:08:58 Download gff for FI09828.complete
Subject Subject Range Query Range Percent Splice Strand
CG10268-RA 1..1151 1..1151 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:11:38 Download gff for FI09828.complete
Subject Subject Range Query Range Percent Splice Strand
CG10268-RA 1..1151 1..1151 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:10:14 Download gff for FI09828.complete
Subject Subject Range Query Range Percent Splice Strand
CG10268-RA 6..1156 1..1151 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-08-28 18:05:54 Download gff for FI09828.complete
Subject Subject Range Query Range Percent Splice Strand
CG10268-RA 1..1151 1..1151 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 05:56:53 Download gff for FI09828.complete
Subject Subject Range Query Range Percent Splice Strand
CG10268-RA 6..1156 1..1151 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:01:03 Download gff for FI09828.complete
Subject Subject Range Query Range Percent Splice Strand
2L 19579093..19579953 291..1151 99 <- Minus
2L 19580057..19580346 1..290 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:01:03 Download gff for FI09828.complete
Subject Subject Range Query Range Percent Splice Strand
2L 19579093..19579953 291..1151 99 <- Minus
2L 19580057..19580346 1..290 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:01:03 Download gff for FI09828.complete
Subject Subject Range Query Range Percent Splice Strand
2L 19579093..19579953 291..1151 99 <- Minus
2L 19580057..19580346 1..290 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:10:14 Download gff for FI09828.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 19579093..19579953 291..1151 99 <- Minus
arm_2L 19580057..19580346 1..290 99   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:41:55 Download gff for FI09828.complete
Subject Subject Range Query Range Percent Splice Strand
2L 19579093..19579953 291..1151 99 <- Minus
2L 19580057..19580346 1..290 99   Minus

FI09828.hyp Sequence

Translation from 216 to 785

> FI09828.hyp
MMKIVLISGKRKCGKDYISERLQRRLGSRSCIVRISEPIKSEWARKLQLD
LDALLGDGPYKEKYRRDMIVWSDEVRAQDYGYFCRVAMEEALSRQQTPYI
LVSDVRRKNDIRWFRETYGPERVITLRLTSRPETRSARGWTFTAGIDDVP
SECDLDDLADGFDVVLANDEELDQEAIDILLDRLQLQYR*

FI09828.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:49:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG10268-PA 189 CG10268-PA 1..189 1..189 983 100 Plus

FI09828.pep Sequence

Translation from 216 to 785

> FI09828.pep
MMKIVLISGKRKCGKDYISERLQRRLGSRSCIVRISEPIKSEWARKLQLD
LDALLGDGPYKEKYRRDMIVWSDEVRAQDYGYFCRVAMEEALSRQQTPYI
LVSDVRRKNDIRWFRETYGPERVITLRLTSRPETRSARGWTFTAGIDDVP
SECDLDDLADGFDVVLANDEELDQEAIDILLDRLQLQYR*

FI09828.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 12:22:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF15482-PA 186 GF15482-PA 1..186 1..187 809 82.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 12:22:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG21619-PA 189 GG21619-PA 1..189 1..189 866 93.1 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 12:22:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH13497-PA 190 GH13497-PA 1..183 1..184 666 71 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:56:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG10268-PA 189 CG10268-PA 1..189 1..189 983 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 12:22:11
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI17248-PA 186 GI17248-PA 1..185 1..186 649 68.1 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 12:22:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL25642-PA 185 GL25642-PA 1..185 1..187 733 77.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 12:22:12
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA10206-PA 185 GA10206-PA 1..185 1..187 735 77.5 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 12:22:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM16997-PA 189 GM16997-PA 1..188 1..188 929 95.7 Plus
Dsec\GM22069-PA 189 GM22069-PA 1..188 1..188 927 95.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 12:22:13
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD21744-PA 189 GD21744-PA 1..188 1..188 929 95.7 Plus
Dsim\GD13720-PA 187 GD13720-PA 1..180 1..180 865 92.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 12:22:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ18008-PA 186 GJ18008-PA 1..185 1..186 688 71.3 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 12:22:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK15226-PA 188 GK15226-PA 1..188 1..187 699 73.5 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 12:22:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE12639-PA 189 GE12639-PA 1..189 1..189 846 90.5 Plus