BDGP Sequence Production Resources |
Search the DGRC for FI10001
Library: | FI |
Tissue Source: | various Drosophila melanogaster |
Created by: | |
Date Registered: | 2005-11-08 |
Comments: | Drosophila melanogaster corrected cDNA clones |
Original Plate Number: | 100 |
Well: | 1 |
Vector: | pOT2 |
Associated Gene/Transcript | net-RB |
Protein status: | FI10001.pep: gold |
Sequenced Size: | 1573 |
1573 bp assembled on 2009-01-22
GenBank Submission: BT058006.1
> FI10001.complete AACAGTCGTGCTCCGGTCATAAGATTTTACGAGAAATCGTGAAAATAAAA AGTTCTAATAAGTTGAAGATAGTGCCAAAGCTCACATACGGCTTAACCAA ACCACAAATTAAAAAAGTGCCTTTAAACAATACGTGACATTTCAATAGGT TTATGTTAACATAAAGCCCGTAATTGTGAATAAATAAAATATAAGCCCAC AAAACTATTCAAATACCGTTTTCGGATACGCGCTACTTTTAAAGTTCTTG AATGTCCTTCGCGGCTATGGCGAATACCAACACAGAAAAACTTTACATGC AACTAAGCGCATCGGAATTATCAGCAATTATTATGAAAGATTCACCCAAT TCCAACGACCGTGATGCGGGTTTTTGTTCCGCCAGTTCGGAAAGCGAAGG CGGAGACGACTTGGTCGTCGAGCACGCGCGCAGTGGCAGTCCCGACATCA GACCAAAAGGAACAGACTCGGCGGACTCCAAGCCAATAGCCCTTGTCCGC AACAAACGCAAGAGTTCGGAACCCTTCAAAGTCGTAGGTTTGACGACTCC CAACTCTAAATCCATGCCTGGTCCTCCGTCCAGTGCGAGTATGAATGCAA CTGGTCCGCTAAAGAAACGCATACGATACACATCTTCCGCCGATTCGGCA GTTGTCCTAACGCCACCAGCCATAGACTCTCCACCGCCCAACAGTTGCAT ACCTTCCACGTTGCGCCTGCAGCATGAAATAATGCCTAATCCGGCACATA TATATGTTCGCCATCCGGGAGTTACGACTCTTCACAGATCGCTTGCTGCC CACCCAGAACAGCTGGAACCACTCGCATTAGTAACGACCAAAAAGCAATG TGTCGACCAAGCGGGGCCTAAAATAGAGGCCTTTTCCGCATTGCTAATTG GAAAACAGCCATCCGCCAAAAAAACGTTGAAGGAAAGGACGCAAAAAGAA TCAACGTCATCTTCCTTTTTAGAAGCTAGTCTTAGCGATGAGGATCTGAA CAAGACGGGATTGGCACCAATTTCGCGACCTCATCAACATCAACGCAATT ACAAGAATATGACTAGGGAGCGCCGCATTGAGGCGAACGCACGTGAACGG ACCCGTGTACACACCATATCCGCCGCCTACGAAACGCTCCGCCAAGCTGT TCCAGCCTATGCCAGCACTCAAAAACTTTCCAAACTCTCCGTTCTTCGGG TAGCGTGTTCCTATATACTAACCTTAAGTAGAATGGCTGGCGAGGATTAC AGCGCCGATCAATCCGTACCGTCCATTGCCACGTGCTTAGAAGCTGTAAC ATCAACCATCCAAACGGAGGGAAAAGTGAAACGAAAGAAAGACGAGTAAT CTGTCCAGTTTCGTGGATAACTTACTTTTTTAGACTTTAAATGCGACTGA TTTCTGCTATTTTTTTAAATATTTGTGCTTAAGCTTAGATTAATCTGCAT ACAGCATTCCTATCCACATGCTTTGATTCTTTGCCAGAAGTGGCCTAATA GCTTTAAAAGTTTTCAAGGCTTTGTTAGATATACAGACTTCATGAGTTTA AAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
gypsy4 | 6852 | gypsy4 GYPSY4 6852bp | 523..746 | 77..295 | 116 | 54 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 83102..84312 | 340..1549 | 99 | <- | Minus |
chr2L | 87055..87393 | 1..339 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
net-RB | 1..1083 | 267..1349 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
net-RB | 1..1083 | 267..1349 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
net-RB | 1..1083 | 267..1349 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
net-RB | 1..1083 | 267..1349 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
net-RB | 25..1573 | 1..1549 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
net-RB | 25..1573 | 1..1549 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
net-RB | 30..1578 | 1..1549 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
net-RB | 30..1578 | 1..1549 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 83068..84277 | 340..1549 | 100 | <- | Minus |
2L | 87020..87358 | 1..339 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 83068..84277 | 340..1549 | 100 | <- | Minus |
2L | 87020..87358 | 1..339 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 83068..84277 | 340..1549 | 100 | <- | Minus |
2L | 87020..87358 | 1..339 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 83068..84277 | 340..1549 | 100 | <- | Minus |
arm_2L | 87020..87358 | 1..339 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 83068..84277 | 340..1549 | 100 | <- | Minus |
2L | 87020..87358 | 1..339 | 99 | Minus |
Translation from 251 to 1348
> FI10001.pep MSFAAMANTNTEKLYMQLSASELSAIIMKDSPNSNDRDAGFCSASSESEG GDDLVVEHARSGSPDIRPKGTDSADSKPIALVRNKRKSSEPFKVVGLTTP NSKSMPGPPSSASMNATGPLKKRIRYTSSADSAVVLTPPAIDSPPPNSCI PSTLRLQHEIMPNPAHIYVRHPGVTTLHRSLAAHPEQLEPLALVTTKKQC VDQAGPKIEAFSALLIGKQPSAKKTLKERTQKESTSSSFLEASLSDEDLN KTGLAPISRPHQHQRNYKNMTRERRIEANARERTRVHTISAAYETLRQAV PAYASTQKLSKLSVLRVACSYILTLSRMAGEDYSADQSVPSIATCLEAVT STIQTEGKVKRKKDE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14859-PA | 456 | GF14859-PA | 105..456 | 30..365 | 1099 | 66.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24687-PA | 369 | GG24687-PA | 1..369 | 1..365 | 1785 | 92.4 | Plus |
Dere\GG11475-PA | 386 | GG11475-PA | 38..172 | 223..347 | 153 | 36.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10058-PA | 362 | GH10058-PA | 1..362 | 6..365 | 1005 | 60.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
net-PC | 360 | CG11450-PC | 1..360 | 6..365 | 1819 | 100 | Plus |
net-PB | 360 | CG11450-PB | 1..360 | 6..365 | 1819 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16429-PA | 347 | GI16429-PA | 6..347 | 12..365 | 940 | 57.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13900-PA | 364 | GL13900-PA | 1..364 | 6..365 | 1278 | 70.3 | Plus |
Dper\GL21846-PA | 449 | GL21846-PA | 71..205 | 223..347 | 154 | 38.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11011-PA | 364 | GA11011-PA | 1..364 | 6..365 | 1278 | 70.3 | Plus |
Dpse\GA18883-PA | 415 | GA18883-PA | 37..171 | 223..347 | 155 | 38.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM16704-PA | 365 | GM16704-PA | 1..365 | 1..365 | 1858 | 96.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22993-PA | 365 | GD22993-PA | 1..365 | 1..365 | 1863 | 96.7 | Plus |
Dsim\GD21279-PA | 386 | GD21279-PA | 38..172 | 223..347 | 148 | 35.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ16214-PA | 357 | GJ16214-PA | 1..357 | 6..365 | 961 | 58.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK21091-PA | 351 | GK21091-PA | 3..351 | 11..365 | 990 | 59.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16494-PA | 369 | GE16494-PA | 1..369 | 1..365 | 1680 | 89.4 | Plus |
Translation from 251 to 1348
> FI10001.hyp MSFAAMANTNTEKLYMQLSASELSAIIMKDSPNSNDRDAGFCSASSESEG GDDLVVEHARSGSPDIRPKGTDSADSKPIALVRNKRKSSEPFKVVGLTTP NSKSMPGPPSSASMNATGPLKKRIRYTSSADSAVVLTPPAIDSPPPNSCI PSTLRLQHEIMPNPAHIYVRHPGVTTLHRSLAAHPEQLEPLALVTTKKQC VDQAGPKIEAFSALLIGKQPSAKKTLKERTQKESTSSSFLEASLSDEDLN KTGLAPISRPHQHQRNYKNMTRERRIEANARERTRVHTISAAYETLRQAV PAYASTQKLSKLSVLRVACSYILTLSRMAGEDYSADQSVPSIATCLEAVT STIQTEGKVKRKKDE*