FI11408.complete Sequence
860 bp assembled on 2009-08-31
GenBank Submission: BT128695.1
> FI11408.complete
AAAATATTTAGCGGACGGAATTTTTCGTCGGGCTCGCGAGAAAAGAGACA
GATAATAAGAGTGAGTGCGTGAGCGTGAGTGAGACAACGCGAAAAGTTAG
AGAGGATCGGAATCATGGCGAGTGTTTTTTTATAATCAAATTTCCACAGC
ACTTTCCACGTATAGTTGTTAATGAAGCAAAAAATTTCATGACAAATGAA
TGGGAGGGGGGCGAAAACTGAGCAGGCCGTGCTGGTCCTCGCATCCTGCC
CCTGAGTTAAAAATGCGGAACTACTGGAAAAACCTTTGGCGAGTACTGGA
CTCCCTTACTGACCCACCTAAAAGATCGGAGGACAAAGTTCTCCAGAGCG
ATTACACAAGTCGTTTAAGCCTGGTGACCCATTTAAGTCTGCAAAGCGAA
CGACGAGCTCCCCGATTTGTGATTCCATCTACACGGCGCCATGTGACTTT
TTCGCCCAGCACTTTGGAACACGTGGAAATCCGAATGGCGGTACAGCAGG
CGGAAACATCGGCCTTCCAGAATTTCGTGCGTGAAATGTACGATGGCTAT
TACCAACTATTACTCTCACAGGAGAGAGAGCTAACCGGCTTTCAGCCAGA
ACAACAGTTGGCCAATCGAAGGCTGGGAATGAAGGACCTCGGGAGACTCC
AGAAAGTGGCCACTGACATGTGGAATCGAATGGACAGGGACCGAAAACAA
CAGTACAAGGATCTGGCCATGATGGCACTGCATCGCCGAAGCCTACGTCT
GCCCCCCGATCCTCATCGCATACCCCCACACCTCAAAAGATCATCCAAAA
AAGTGACTAAATATAGATCAACTTGCTTATATCCCTGAACAAAAAAAAAA
AAAAAAAAAA
FI11408.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 16:37:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34269-RA | 656 | CG34269-RA | 1..656 | 184..838 | 3105 | 98.4 | Plus |
hipk.a | 5720 | hipk.a | 37..222 | 1..186 | 930 | 100 | Plus |
hipk-RB | 6324 | hipk-RB | 55..240 | 1..186 | 930 | 100 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-15 17:08:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chr3L | 24539361 | chr3L | 528198..528855 | 184..840 | 3105 | 98.5 | Plus |
chr3L | 24539361 | chr3L | 542949..543131 | 1..183 | 915 | 100 | Plus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:23:05 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 17:08:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 528339..529000 | 184..844 | 3110 | 98.3 | Plus |
3L | 28110227 | 3L | 543095..543277 | 1..183 | 915 | 100 | Plus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:34:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28103327 | 3L | 528339..529000 | 184..844 | 3120 | 98.3 | Plus |
3L | 28103327 | 3L | 543095..543277 | 1..183 | 915 | 100 | Plus |
Blast to na_te.dros performed on 2019-03-15 17:08:37 has no hits.
FI11408.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 17:09:45 Download gff for
FI11408.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chr3L | 528198..528855 | 184..840 | 98 | | Plus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 18:15:05 Download gff for
FI11408.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34269-RA | 1..576 | 263..838 | 98 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:08:48 Download gff for
FI11408.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34269-RA | 1..576 | 263..838 | 98 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:27:34 Download gff for
FI11408.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34269-RA | 1..576 | 263..838 | 98 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:26:44 Download gff for
FI11408.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34269-RA | 1..576 | 263..838 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-08-31 10:55:26 Download gff for
FI11408.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34269-RA | 1..656 | 184..838 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:08:48 Download gff for
FI11408.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34269-RA | 1..658 | 184..840 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:27:34 Download gff for
FI11408.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34269-RA | 1..658 | 184..840 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:26:44 Download gff for
FI11408.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34269-RA | 1..660 | 183..840 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:09:45 Download gff for
FI11408.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 528339..528996 | 184..840 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:09:45 Download gff for
FI11408.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 528339..528996 | 184..840 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:09:45 Download gff for
FI11408.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 528339..528996 | 184..840 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:27:34 Download gff for
FI11408.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 528339..528996 | 184..840 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:00:53 Download gff for
FI11408.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 528339..528996 | 184..840 | 98 | | Plus |
FI11408.hyp Sequence
Translation from 185 to 837
> FI11408.hyp
CMTNEWDGGRKLSRPCWSSHPAPELKMRNYWKNLWRVLDSLTDPPKRSED
KVLQSDYTSRLSLVTHLSLQSERRAPRFVIPSTRRHVTFSPSTLEHVEIR
MAVQQAETSAFQNFVREMYDGYYQLLLSQERELTGFQPEQQLANRRLGMK
DLGRLQKVATDMWNRMDRDRKQQYKDLAMMALHRRSLRLPPDPHRIPPHL
KRSSKKVTKYRSTCLYP*
FI11408.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:50:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34269-PA | 191 | CG34269-PA | 1..191 | 27..217 | 1000 | 100 | Plus |
FI11408.pep Sequence
Translation from 199 to 837
> FI11408.pep
MGGGRKLSRPCWSSHPAPELKMRNYWKNLWRVLDSLTDPPKRSEDKVLQS
DYTSRLSLVTHLSLQSERRAPRFVIPSTRRHVTFSPSTLEHVEIRMAVQQ
AETSAFQNFVREMYDGYYQLLLSQERELTGFQPEQQLANRRLGMKDLGRL
QKVATDMWNRMDRDRKQQYKDLAMMALHRRSLRLPPDPHRIPPHLKRSSK
KVTKYRSTCLYP*
FI11408.pep Blast Records
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 13:29:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG14725-PA | 191 | GG14725-PA | 1..191 | 22..212 | 750 | 78.5 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:54:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34269-PA | 191 | CG34269-PA | 1..191 | 22..212 | 1000 | 100 | Plus |
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 13:29:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dper\GL22494-PA | 215 | GL22494-PA | 77..207 | 77..208 | 286 | 53.8 | Plus |
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 13:29:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dpse\GA24450-PA | 215 | GA24450-PA | 1..207 | 22..208 | 280 | 39.9 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 13:29:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM14342-PA | 191 | GM14342-PA | 1..191 | 22..212 | 934 | 91.6 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 13:29:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD11018-PA | 117 | GD11018-PA | 1..117 | 96..212 | 581 | 93.2 | Plus |
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 13:29:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dwil\GK19762-PA | 179 | GK19762-PA | 58..169 | 80..190 | 247 | 49.1 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 13:29:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE21087-PA | 189 | GE21087-PA | 1..189 | 22..212 | 752 | 77.5 | Plus |