Clone FI11408 Report

Search the DGRC for FI11408

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:114
Well:8
Vector:pOT2
Associated Gene/TranscriptCG34269-RA
Protein status:FI11408.pep: gold
Sequenced Size:860

Clone Sequence Records

FI11408.complete Sequence

860 bp assembled on 2009-08-31

GenBank Submission: BT128695.1

> FI11408.complete
AAAATATTTAGCGGACGGAATTTTTCGTCGGGCTCGCGAGAAAAGAGACA
GATAATAAGAGTGAGTGCGTGAGCGTGAGTGAGACAACGCGAAAAGTTAG
AGAGGATCGGAATCATGGCGAGTGTTTTTTTATAATCAAATTTCCACAGC
ACTTTCCACGTATAGTTGTTAATGAAGCAAAAAATTTCATGACAAATGAA
TGGGAGGGGGGCGAAAACTGAGCAGGCCGTGCTGGTCCTCGCATCCTGCC
CCTGAGTTAAAAATGCGGAACTACTGGAAAAACCTTTGGCGAGTACTGGA
CTCCCTTACTGACCCACCTAAAAGATCGGAGGACAAAGTTCTCCAGAGCG
ATTACACAAGTCGTTTAAGCCTGGTGACCCATTTAAGTCTGCAAAGCGAA
CGACGAGCTCCCCGATTTGTGATTCCATCTACACGGCGCCATGTGACTTT
TTCGCCCAGCACTTTGGAACACGTGGAAATCCGAATGGCGGTACAGCAGG
CGGAAACATCGGCCTTCCAGAATTTCGTGCGTGAAATGTACGATGGCTAT
TACCAACTATTACTCTCACAGGAGAGAGAGCTAACCGGCTTTCAGCCAGA
ACAACAGTTGGCCAATCGAAGGCTGGGAATGAAGGACCTCGGGAGACTCC
AGAAAGTGGCCACTGACATGTGGAATCGAATGGACAGGGACCGAAAACAA
CAGTACAAGGATCTGGCCATGATGGCACTGCATCGCCGAAGCCTACGTCT
GCCCCCCGATCCTCATCGCATACCCCCACACCTCAAAAGATCATCCAAAA
AAGTGACTAAATATAGATCAACTTGCTTATATCCCTGAACAAAAAAAAAA
AAAAAAAAAA

FI11408.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 16:37:50
Subject Length Description Subject Range Query Range Score Percent Strand
CG34269-RA 656 CG34269-RA 1..656 184..838 3105 98.4 Plus
hipk.a 5720 hipk.a 37..222 1..186 930 100 Plus
hipk-RB 6324 hipk-RB 55..240 1..186 930 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 17:08:39
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 528198..528855 184..840 3105 98.5 Plus
chr3L 24539361 chr3L 542949..543131 1..183 915 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:23:05 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 17:08:37
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 528339..529000 184..844 3110 98.3 Plus
3L 28110227 3L 543095..543277 1..183 915 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:34:50
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 528339..529000 184..844 3120 98.3 Plus
3L 28103327 3L 543095..543277 1..183 915 100 Plus
Blast to na_te.dros performed on 2019-03-15 17:08:37 has no hits.

FI11408.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 17:09:45 Download gff for FI11408.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 528198..528855 184..840 98   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 18:15:05 Download gff for FI11408.complete
Subject Subject Range Query Range Percent Splice Strand
CG34269-RA 1..576 263..838 98   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:08:48 Download gff for FI11408.complete
Subject Subject Range Query Range Percent Splice Strand
CG34269-RA 1..576 263..838 98   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:27:34 Download gff for FI11408.complete
Subject Subject Range Query Range Percent Splice Strand
CG34269-RA 1..576 263..838 98   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:26:44 Download gff for FI11408.complete
Subject Subject Range Query Range Percent Splice Strand
CG34269-RA 1..576 263..838 98   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-08-31 10:55:26 Download gff for FI11408.complete
Subject Subject Range Query Range Percent Splice Strand
CG34269-RA 1..656 184..838 98   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:08:48 Download gff for FI11408.complete
Subject Subject Range Query Range Percent Splice Strand
CG34269-RA 1..658 184..840 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:27:34 Download gff for FI11408.complete
Subject Subject Range Query Range Percent Splice Strand
CG34269-RA 1..658 184..840 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:26:44 Download gff for FI11408.complete
Subject Subject Range Query Range Percent Splice Strand
CG34269-RA 1..660 183..840 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:09:45 Download gff for FI11408.complete
Subject Subject Range Query Range Percent Splice Strand
3L 528339..528996 184..840 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:09:45 Download gff for FI11408.complete
Subject Subject Range Query Range Percent Splice Strand
3L 528339..528996 184..840 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:09:45 Download gff for FI11408.complete
Subject Subject Range Query Range Percent Splice Strand
3L 528339..528996 184..840 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:27:34 Download gff for FI11408.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 528339..528996 184..840 98   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:00:53 Download gff for FI11408.complete
Subject Subject Range Query Range Percent Splice Strand
3L 528339..528996 184..840 98   Plus

FI11408.hyp Sequence

Translation from 185 to 837

> FI11408.hyp
CMTNEWDGGRKLSRPCWSSHPAPELKMRNYWKNLWRVLDSLTDPPKRSED
KVLQSDYTSRLSLVTHLSLQSERRAPRFVIPSTRRHVTFSPSTLEHVEIR
MAVQQAETSAFQNFVREMYDGYYQLLLSQERELTGFQPEQQLANRRLGMK
DLGRLQKVATDMWNRMDRDRKQQYKDLAMMALHRRSLRLPPDPHRIPPHL
KRSSKKVTKYRSTCLYP*

FI11408.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:50:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG34269-PA 191 CG34269-PA 1..191 27..217 1000 100 Plus

FI11408.pep Sequence

Translation from 199 to 837

> FI11408.pep
MGGGRKLSRPCWSSHPAPELKMRNYWKNLWRVLDSLTDPPKRSEDKVLQS
DYTSRLSLVTHLSLQSERRAPRFVIPSTRRHVTFSPSTLEHVEIRMAVQQ
AETSAFQNFVREMYDGYYQLLLSQERELTGFQPEQQLANRRLGMKDLGRL
QKVATDMWNRMDRDRKQQYKDLAMMALHRRSLRLPPDPHRIPPHLKRSSK
KVTKYRSTCLYP*

FI11408.pep Blast Records

Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 13:29:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG14725-PA 191 GG14725-PA 1..191 22..212 750 78.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:54:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG34269-PA 191 CG34269-PA 1..191 22..212 1000 100 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 13:29:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL22494-PA 215 GL22494-PA 77..207 77..208 286 53.8 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 13:29:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA24450-PA 215 GA24450-PA 1..207 22..208 280 39.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 13:29:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM14342-PA 191 GM14342-PA 1..191 22..212 934 91.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 13:29:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD11018-PA 117 GD11018-PA 1..117 96..212 581 93.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 13:29:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK19762-PA 179 GK19762-PA 58..169 80..190 247 49.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 13:29:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE21087-PA 189 GE21087-PA 1..189 22..212 752 77.5 Plus