Clone FI11682 Report

Search the DGRC for FI11682

Clone and Library Details

Library:FI
Tissue Source:various Drosophila melanogaster
Created by: 
Date Registered:2005-11-08
Comments:Drosophila melanogaster corrected cDNA clones
Original Plate Number:116
Well:82
Vector:pOT2
Associated Gene/TranscriptCG14985-RB
Protein status:FI11682.pep: gold
Sequenced Size:2829

Clone Sequence Records

FI11682.complete Sequence

2829 bp assembled on 2009-06-09

GenBank Submission: BT088787.1

> FI11682.complete
CGGCACGAGGCGTTTTCGAATGTTGCATTCCGTGGCAATAACATATTAAA
TGTGAAAGATCCTCGATCAAAAGATCCTGAACAGTGAGATATTCGAAGTA
CTTAATACTCCCCCGCCTGAGATGCCAAGATGAGCAGCGCTTTGAACGCC
AAGGAGTTACTTATACGCGCCGTGGAATGCGACCAAGTTGGACGGATCTT
GGAGGCGCAAACGCTGTACACAGAGGGGATCGGGCAGTTGATGCAGTTCG
TCAACGGGGAACCGGATGAAGCCAAACGGAAGGGGTTCCTGACCAGGATC
AAGGAGTACATGGATCGGGCTGACGCAATTAAGGCGCGGATCAATGGCAA
ACTAATGCTCGGCGAGGTGGTTTCCCACGTTTCCATCGACGAGAATGATA
CGGGCTTCGACTACGATCAGCTCTTCGGGAAATACATGGACGACAAGACC
GTCGAGATCATGCTGGAGGAACCCTACATGACGCAGAACTATCAGTATCA
AAATCTAATAAGATTCTTGGAGCTAGCTGCCACAAATTGCCCAAACCTAA
AGTATTTTCGACTGATCACCAAAGAGTACAAGGATGCAAAGAATCCAGAT
CAGCAGGAAACAAATCTTGGACAGATCAAGGGTGACTTGGAGCGGCGGAA
CGTGACTGTCTACATAAAATACGAAGACTCTCTGCACGATCGAAAAATTT
ACTTAAGCAATGGCTATATAATTAAGATTGGGCGAGGTCTGCACTTCTAC
AAGCCCGCCAATCCGATGTATTCCATTGGCCTGGTCAACTACAAATTCCG
AAAATGCCTCCAAACGGATGTGGATATATGGCGCAACTCAAGCGCTGCAT
CGTGAAAAGGCAGACAATATTGTTTAGTTTTAAGAAATGCAACTTCATTT
AGACTGGCTCTTGCCAATTTTATAAAGATTTCATTCAATTTCTACAAAAA
CGAGCTGCGAGTGTGTTGCAGTCACCCACAATTGCAGATTTTGGCCGGCT
ATAAATCTGCAGACGCCACGAAGACACCGAAACTAATATATGGACGTGGC
CAAAGGGGCGTTCTCCTTCATCCTCCGTCCTCCGTCCTCTGTGCTCTCTG
CTGGCTCCGACGATGCCCTGCCAGAAAATGTTTAAAATTCATAACTTTCA
CGCCACTTGCGGATGCGGAGGCAGCTGCACAGCTGGCGGCCCGTCCTGGC
TGCTGTTTTGAATGCCTCTCGCCACTGAGGCAGCCAGCGGGTGGCCACTG
CAGTTGCATAAAAGACAGAAGCGGAAGCTCATGCTTTACCAGCTTCTGTC
CGTGTCCTTAAAGCCAGGTCTGCAGCTCGACGGCGGTACAGTTGAGCCTC
TGTAGGTGAAACATTGACGCCATTCTGGAAAGCAGTCACTCGAGTATCGT
CAGTTACTGGAAAGTAACTTTCAAAGTACGCACTTCAGCTAGATCATTTC
TGTGCTCATTAGCTGAATTTTGGATATAGTCCCAGCTACAGTTGGGACCA
ATGGAGTCGGCCTGTTCCTGTTCCTGTTCGTAATGCCAGCGCCAGGAGAC
ATGTGCGTGGATAATTAGAACTGCGACACAGTTGGCTGCACATCGCAATC
GGAATTGGAGGCGAAGTCGGTGTGCCACCTTCTCATCGTGTGTGGGGTAT
ATTTTCAATTTACTTGGTGCCATGCCAGGGATTTATCAACAGATGAAGGC
AATTGTTACGCAAAGGCCCGAAATGCGGCGCGATGAGCCGGCCTAATAAA
TTGCACCAGAGCTAAAATGCTTTGCTCGCTTTTAAATTTTATGGCCCGTA
AGAAGGCCTGGGAACAGCAGCAGTAGAAGAGCAAGATGAGTCCCAACCAC
CCAGCAGGACCCACTGTAACCACCCCTAATTTTGGGTTTAAGCACGTCTA
GAGGTCGGAGCCTGCGGGCGACTATGGCCATGGCCATGGGTATGGGTATG
GCTATGGGTATACTCTAGAGTGGAGTGGAGTGGGGATTCCATTTGCCTAA
GCTGGCTATTCATTCCCTGGATATTCTAAACAAGCAACAAGGAGATGCTC
GGGGCCCAGGATGAACTTATTGAACAATTAGATGGTTCACTTATTTTAGA
TAAATCTATGAACTAGATGGATCCCGGGGCCTCACCGGTGAATGTTTGCC
TACAAATAAGCCACTAACTGACTGAACAACAGACCCGCACTAAGCTGATT
CCGGCTCAGGCTTCCCCTTGGCAAGCAACAGTTCCTCGATGCCCAGCCAT
GGTTAGGTCCATGTCCATAGGCCACTGGTCCACTGACTCCTTGGTCACAA
GTGCACAAGCCTCGGGCGCTGCCTGCCAATTTGTGAGCAATGAATGCAGC
AGAGCTAGCGCAGGAAACTACAATATACAATACATAACCATGGAATTAGT
TATGGTCCTGGTCGACGGCACCAGCTTCATCTTCGTCCTGCTCGAGTGCG
AGGATACAAAGGGCCCACCACCCAACACTTCACCCCATTACTCCACCTTC
CTTCGAGGGGGAGGATGTCGAGCAGACACTGCCTGGGGCAGACCAACAGC
ATAACTAATCCGAATATTTTACTCCCACCCTCGCCGAAAAAGACAAGTCC
AAGTGGAAGCCACTTTGTTACCCGGTCATCTTTTTCTGCGTGTGAGGGCA
TGTCCAAATCGGTGGTTTGTGAAAATGGGTTACGCCTAAGATGGTCCAGC
ATCCGGATATTTAATTGTAATCCGCGTCATATAATATAATCCGCATTATA
TAATTCCTTTTTCTTTTTTCACTTACGAAACCTAATACAGATTAAAATAT
TTCAAACACTTAAAAAAAAAAAAAAAAAA

FI11682.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 21:31:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG14985-RB 2902 CG14985-RB 40..2843 10..2812 13680 99.2 Plus
CG14985.a 790 CG14985.a 30..725 10..705 3465 99.8 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 08:40:46
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 4003902..4006012 702..2811 10205 99 Plus
chr3L 24539361 chr3L 4002865..4003350 10..495 2430 100 Plus
chr3L 24539361 chr3L 4003519..4003727 493..701 1045 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:23:09 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 08:40:44
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 4004516..4006627 702..2812 10210 99 Plus
3L 28110227 3L 4003479..4003964 10..495 2430 100 Plus
3L 28110227 3L 4004133..4004341 493..701 1045 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:47:56
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 4004516..4006627 702..2812 10220 99 Plus
3L 28103327 3L 4003479..4003964 10..495 2430 100 Plus
3L 28103327 3L 4004133..4004341 493..701 1045 100 Plus
Blast to na_te.dros performed on 2019-03-16 08:40:45 has no hits.

FI11682.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 08:41:50 Download gff for FI11682.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 4002858..4003350 3..495 99 -> Plus
chr3L 4003522..4003727 496..701 100 -> Plus
chr3L 4003902..4006012 702..2811 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 18:10:17 Download gff for FI11682.complete
Subject Subject Range Query Range Percent Splice Strand
CG14985-RB 1..726 130..855 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 21:47:11 Download gff for FI11682.complete
Subject Subject Range Query Range Percent Splice Strand
CG14985-RB 1..726 130..855 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 09:34:28 Download gff for FI11682.complete
Subject Subject Range Query Range Percent Splice Strand
CG14985-RB 1..726 130..855 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 09:45:49 Download gff for FI11682.complete
Subject Subject Range Query Range Percent Splice Strand
CG14985-RB 1..726 130..855 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-06-09 09:54:34 Download gff for FI11682.complete
Subject Subject Range Query Range Percent Splice Strand
CG14985-RB 2..2810 6..2811 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 21:47:11 Download gff for FI11682.complete
Subject Subject Range Query Range Percent Splice Strand
CG14985-RB 2..2810 6..2811 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 09:34:28 Download gff for FI11682.complete
Subject Subject Range Query Range Percent Splice Strand
CG14985-RB 2..2808 7..2811 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:45:49 Download gff for FI11682.complete
Subject Subject Range Query Range Percent Splice Strand
CG14985-RB 2..2808 7..2811 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 08:41:50 Download gff for FI11682.complete
Subject Subject Range Query Range Percent Splice Strand
3L 4003472..4003964 3..495 99 -> Plus
3L 4004136..4004341 496..701 100 -> Plus
3L 4004516..4006626 702..2811 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 08:41:50 Download gff for FI11682.complete
Subject Subject Range Query Range Percent Splice Strand
3L 4003472..4003964 3..495 99 -> Plus
3L 4004136..4004341 496..701 100 -> Plus
3L 4004516..4006626 702..2811 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 08:41:50 Download gff for FI11682.complete
Subject Subject Range Query Range Percent Splice Strand
3L 4003472..4003964 3..495 99 -> Plus
3L 4004136..4004341 496..701 100 -> Plus
3L 4004516..4006626 702..2811 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 09:34:28 Download gff for FI11682.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 4003472..4003964 3..495 99 -> Plus
arm_3L 4004136..4004341 496..701 100 -> Plus
arm_3L 4004516..4006626 702..2811 99   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 19:22:37 Download gff for FI11682.complete
Subject Subject Range Query Range Percent Splice Strand
3L 4003472..4003964 3..495 99 -> Plus
3L 4004136..4004341 496..701 100 -> Plus
3L 4004516..4006626 702..2811 99   Plus

FI11682.pep Sequence

Translation from 129 to 854

> FI11682.pep
MSSALNAKELLIRAVECDQVGRILEAQTLYTEGIGQLMQFVNGEPDEAKR
KGFLTRIKEYMDRADAIKARINGKLMLGEVVSHVSIDENDTGFDYDQLFG
KYMDDKTVEIMLEEPYMTQNYQYQNLIRFLELAATNCPNLKYFRLITKEY
KDAKNPDQQETNLGQIKGDLERRNVTVYIKYEDSLHDRKIYLSNGYIIKI
GRGLHFYKPANPMYSIGLVNYKFRKCLQTDVDIWRNSSAAS*

FI11682.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 13:49:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF25021-PA 241 GF25021-PA 1..241 1..241 1078 82.6 Plus
Dana\GF13266-PA 278 GF13266-PA 20..247 9..240 489 41.4 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 13:49:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG15175-PA 248 GG15175-PA 1..231 1..231 1161 92.6 Plus
Dere\GG22138-PA 267 GG22138-PA 19..241 9..235 498 42.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 13:49:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH15772-PA 241 GH15772-PA 3..239 2..240 965 74.9 Plus
Dgri\GH21125-PA 270 GH21125-PA 22..245 14..240 452 40.1 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:18:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG14985-PB 241 CG14985-PB 1..241 1..241 1255 100 Plus
CG14985-PC 190 CG14985-PC 1..190 1..190 980 100 Plus
CG30398-PA 267 CG30398-PA 19..241 9..235 470 41.4 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 13:49:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI12552-PA 236 GI12552-PA 1..235 1..237 1026 78.9 Plus
Dmoj\GI18729-PA 278 GI18729-PA 16..243 9..240 459 37.9 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 13:49:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL16059-PA 156 GL16059-PA 38..156 123..241 552 84 Plus
Dper\GL16948-PA 274 GL16948-PA 19..246 9..240 459 39.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 13:49:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA13405-PA 241 GA13405-PA 1..241 1..241 1101 83.4 Plus
Dpse\GA15817-PA 274 GA15817-PA 19..246 9..240 459 39.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 13:49:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM14605-PA 195 GM14605-PA 1..170 1..170 763 87.1 Plus
Dsec\GM15860-PA 267 GM15860-PA 19..241 9..235 468 41.9 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 13:49:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD11623-PA 267 GD11623-PA 19..241 9..235 466 41.4 Plus
Dsim\GD13796-PA 109 GD13796-PA 1..59 1..59 287 93.2 Plus
Dsim\GD13796-PA 109 GD13796-PA 60..109 192..241 272 98 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 13:49:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ15455-PA 239 GJ15455-PA 1..235 1..237 1053 79.7 Plus
Dvir\GJ21749-PA 276 GJ21749-PA 16..238 9..235 465 39.2 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 13:49:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK17508-PA 229 GK17508-PA 1..229 1..231 1016 79.7 Plus
Dwil\GK15925-PA 302 GK15925-PA 22..249 9..240 473 40.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 13:49:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE21393-PA 250 GE21393-PA 1..230 1..230 1148 91.7 Plus
Dyak\GE12219-PA 267 GE12219-PA 19..241 9..235 490 41.9 Plus

FI11682.hyp Sequence

Translation from 129 to 854

> FI11682.hyp
MSSALNAKELLIRAVECDQVGRILEAQTLYTEGIGQLMQFVNGEPDEAKR
KGFLTRIKEYMDRADAIKARINGKLMLGEVVSHVSIDENDTGFDYDQLFG
KYMDDKTVEIMLEEPYMTQNYQYQNLIRFLELAATNCPNLKYFRLITKEY
KDAKNPDQQETNLGQIKGDLERRNVTVYIKYEDSLHDRKIYLSNGYIIKI
GRGLHFYKPANPMYSIGLVNYKFRKCLQTDVDIWRNSSAAS*

FI11682.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:50:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG14985-PB 241 CG14985-PB 1..241 1..241 1255 100 Plus
CG14985-PC 190 CG14985-PC 1..190 1..190 980 100 Plus
CG30398-PA 267 CG30398-PA 19..241 9..235 470 41.4 Plus