Clone Sequence Records
FI11910.complete Sequence
2062 bp assembled on 2009-10-13
GenBank Submission: BT100052.1
> FI11910.complete
GCGGTTCAGTCTTTGACTCTCCACCAATTCGGTCGCTTGCGTTTGCTCCA
GCTGCGTTCTTTTCGCTCTCTTTGGCTCGCGTGAAAGTCGTAAAGTTCAG
CTAGCTCTCTACGATACAGAAAAAGAAACGCATACAACAAATTCGCCAGC
GATAGAAAACCGATTTAAACTGCAATTGCAATGCCTAAAATGCGTACGTG
AGTTTCGCGCAGTGATCGCTGTGAAAGTTCAAGTGAAAGCGGAAAGAAGA
AACAAAGCGAGAATACTTCAAAAGCAATAAACCAAAAAGTGCAAAAATAC
CTAAAGTTTAAACAAAGAAAACAAGTTATACAAAACCATAGCCATGTTGT
GTCCGCCAATGGCCCTGGGCCCATTTCTCGCCGCCCCCGTGCCACGCCCA
CCGCCCAGCGCATCGGAGAAGAAGAGAATCTGTCGGAACCTATTCAATAA
CGCTCCCGGGGACTCGAATATCGATCAGCTGTTGGCCCAGGAGCAGCACA
CGCAGAGATTATACGTTAAGGAACGCTACGGATATGACATCCAGCTGGAA
TCTAATCGGGATGCGGATGCGAATACGGATGCGGATGCTGATACGGATGC
CCATTGTCAGGTCCTGCGCGGAATGCGGTATCCGACCTCAAGGACGATAT
CCAGCACCGATGCCGATGAGTGCAATCCAAAGGCAGTCAGCCAAGCGCCG
AGGGGCATGGCCCTGACTCCCGCCCAGATCTCCGCCAGCGCAAAGCTGAT
CCTTCAGAAATGCCCGGAAAGCGATCGCAAAAAAAGCAACGGCAGTGCGG
ATTTGGCCAACTGCACGCGACATGGCCAAAAGCCATATGCGAGGCAGCCA
CAAGGCCTCAAAGGCATGTACAATGTTCGCAAGACCGTGAATGGTATTTC
GAAACCCAACGTCAAGAATGGTTACAACAACAACAACAACAGCAGCAGCA
GCAACAACAACAGCAACATGAATATTAATAATAAGATTGTGGATAATGGT
ACTAGCGAATTGGCAGATCAGAAGCAGTAACTTTGGATCAGAATGACGAT
GACAAATAGCCCCTGGCGGAGCAATAATTGCAATATATGATATTAATTGT
AAATGTAATTTTAATTTCTAAAATAATTTGTTTATTTTTTTGTACCCCCG
CCATACACAGATACTTTTGTGTATGGATTGTACGTTTGTTTTAAACCAAG
ACTTGACGGTCCAAAAATGTTGTTGCATAACAAATGATTAAGTGAATGGA
TAAAAGCCAACCAGAAACAACAACAAAAGCAACCCCAGAAAAGATCGGCG
CGCGTGCACGGCCAAAAACAGGCAAAAAAAATATATGATTAATAATTAAT
AATAGTAATATATCCGGATGCATTGCGATATCGGTCTTATAATGGAAATT
ATTAAGTTAATGGATATGTGCTAATGTTAGACAAGCGATCGACAGCGCCA
TGCATCCACTATATATAGACTAAACCCCAACCCAAACCAATTCAAGCGTT
CTCAGCGTGTTTTCGGGTCCAGATGCACGCGTGTGCCAAAAGTATTTACA
ATTTACTTTGTGTCATGATCTCAATTATTAAAAACAATTTTATTATTTTG
TTTATCTAAATGTAATTATAATTGAAATTATTTAAAAATTCTTCTTAGCC
CACAAACAAACACACACACACACCCTCGCCCCTCTCATTCACACACCACC
CACGCACACTTTTACACACACGCACACACACACACTGTACTCATATTTAT
TGTATGTACATTATCGATGTGACATTTTAAATTGTATGTACTGTCTATGT
ATAAAAACTTCGTATCTATGGCAAAATTATTTCCCCTTTAAGAGACCCCC
CCATTTTCGAAATTCTATTTTGAACAACCAAACTGTGTATATTGTACGGA
GTGTAACCAAACTCCAAGCAGCTAAATGCGAGAAACCACAACAACAAATA
CTGTGCATATTTCCTTAAAAACTTTGTACGAAAGCAAGATGAAAAAAAAA
AACTATTCTACTGTAACTCTCAAGCGGAGAGTAGCAGAAAAAAACCAAAA
AAAAAAAAAAAA
FI11910.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 16:54:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| glec.b | 2207 | glec.b | 116..2175 | 1..2060 | 10255 | 99.8 | Plus |
| glec-RA | 2207 | glec-RA | 116..2175 | 1..2060 | 10255 | 99.8 | Plus |
| glec.a | 1971 | glec.a | 1000..1971 | 864..1835 | 4860 | 100 | Plus |
| glec.a | 1971 | glec.a | 1..863 | 1..863 | 4300 | 99.8 | Plus |
Blast to d_melanogaster_OreR.fa performed 2019-03-15 14:59:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| chr3R | 27901430 | chr3R | 17674408..17675592 | 2046..862 | 5785 | 99.6 | Minus |
| chr3R | 27901430 | chr3R | 17679126..17679989 | 864..1 | 4215 | 99.2 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:23:13 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 14:58:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 21850680..21851878 | 2060..862 | 5965 | 99.8 | Minus |
| 3R | 32079331 | 3R | 21855399..21856262 | 864..1 | 4305 | 99.9 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 18:51:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 31820162 | 3R | 21591511..21592709 | 2060..862 | 5965 | 99.8 | Minus |
| 3R | 31820162 | 3R | 21596230..21597093 | 864..1 | 4305 | 99.8 | Minus |
Blast to na_te.dros performed 2019-03-15 14:58:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| HeT-A | 6083 | HeT-A DM06920 6083bp Derived from U06920.2 (Rel. 67, Last updated, Version 14). | 5774..5895 | 1082..1203 | 142 | 60.8 | Plus |
| Quasimodo | 7387 | Quasimodo QUASIMODO 7387bp Derived from P1 clones DS08479 & DS07153 by Sue Celniker, 29 March 2001. | 2197..2254 | 1140..1083 | 128 | 69 | Minus |
| HeT-A | 6083 | HeT-A DM06920 6083bp Derived from U06920.2 (Rel. 67, Last updated, Version 14). | 5746..5802 | 1155..1096 | 121 | 71.7 | Minus |
| gypsy11 | 4428 | gypsy11 GYPSY11 4428bp | 3891..3945 | 1789..1736 | 119 | 70.9 | Minus |
| gypsy12 | 10218 | gypsy12 GYPSY12 10218bp | 9765..9806 | 1364..1324 | 117 | 78.6 | Minus |
| gypsy12 | 10218 | gypsy12 GYPSY12 10218bp | 1883..1924 | 1364..1324 | 117 | 78.6 | Minus |
FI11910.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 14:59:48 Download gff for
FI11910.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| chr3R | 17675373..17675590 | 864..1081 | 78 | <- | Minus |
| chr3R | 17679127..17679989 | 1..863 | 99 | | Minus |
| chr3R | 17674415..17674717 | 1736..2039 | 99 | == | Minus |
| chr3R | 17674881..17675312 | 1141..1572 | 90 | == | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2009-10-19 17:57:52 Download gff for
FI11910.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| glec-RA | 1..687 | 344..1030 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 14:44:07 Download gff for
FI11910.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| glec-RA | 1..687 | 344..1030 | 100 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 00:56:10 Download gff for
FI11910.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| glec-RA | 1..687 | 344..1030 | 100 | | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:20:45 Download gff for
FI11910.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| glec-RA | 1..687 | 344..1030 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2009-10-13 12:40:53 Download gff for
FI11910.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| glec-RA | 1..1835 | 1..1835 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 14:44:07 Download gff for
FI11910.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| glec-RA | 1..1835 | 1..1835 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:56:10 Download gff for
FI11910.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| glec-RA | 5..2050 | 1..2046 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:20:45 Download gff for
FI11910.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| glec-RA | 5..2050 | 1..2046 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:59:48 Download gff for
FI11910.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 21850694..21851876 | 864..2046 | 99 | <- | Minus |
| 3R | 21855400..21856262 | 1..863 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:59:48 Download gff for
FI11910.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 21850694..21851876 | 864..2046 | 99 | <- | Minus |
| 3R | 21855400..21856262 | 1..863 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:59:48 Download gff for
FI11910.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 21850694..21851876 | 864..2046 | 99 | <- | Minus |
| 3R | 21855400..21856262 | 1..863 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:56:10 Download gff for
FI11910.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 17676416..17677598 | 864..2046 | 99 | <- | Minus |
| arm_3R | 17681122..17681984 | 1..863 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 12:24:50 Download gff for
FI11910.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 21591525..21592707 | 864..2046 | 99 | <- | Minus |
| 3R | 21596231..21597093 | 1..863 | 99 | | Minus |
FI11910.hyp Sequence
Translation from 343 to 1029
> FI11910.hyp
MLCPPMALGPFLAAPVPRPPPSASEKKRICRNLFNNAPGDSNIDQLLAQE
QHTQRLYVKERYGYDIQLESNRDADANTDADADTDAHCQVLRGMRYPTSR
TISSTDADECNPKAVSQAPRGMALTPAQISASAKLILQKCPESDRKKSNG
SADLANCTRHGQKPYARQPQGLKGMYNVRKTVNGISKPNVKNGYNNNNNS
SSSNNNSNMNINNKIVDNGTSELADQKQ*
FI11910.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 23:51:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| glec-PA | 228 | CG6575-PA | 1..228 | 1..228 | 1202 | 100 | Plus |
FI11910.pep Sequence
Translation from 343 to 1029
> FI11910.pep
MLCPPMALGPFLAAPVPRPPPSASEKKRICRNLFNNAPGDSNIDQLLAQE
QHTQRLYVKERYGYDIQLESNRDADANTDADADTDAHCQVLRGMRYPTSR
TISSTDADECNPKAVSQAPRGMALTPAQISASAKLILQKCPESDRKKSNG
SADLANCTRHGQKPYARQPQGLKGMYNVRKTVNGISKPNVKNGYNNNNNS
SSSNNNSNMNINNKIVDNGTSELADQKQ*
FI11910.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 19:38:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dana\GF16961-PA | 213 | GF16961-PA | 5..197 | 3..228 | 142 | 32.6 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 19:38:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dere\GG12555-PA | 224 | GG12555-PA | 1..224 | 1..228 | 713 | 66.8 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:15:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| glec-PA | 228 | CG6575-PA | 1..228 | 1..228 | 1202 | 100 | Plus |
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 19:38:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dpse\GA19695-PA | 200 | GA19695-PA | 19..192 | 18..224 | 141 | 33.8 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 19:38:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dsec\GM23688-PA | 223 | GM23688-PA | 1..223 | 1..228 | 946 | 86.4 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 19:38:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dsim\GD18497-PA | 224 | GD18497-PA | 1..224 | 1..228 | 942 | 86 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 19:38:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dyak\GE24080-PA | 221 | GE24080-PA | 3..221 | 1..228 | 735 | 71.6 | Plus |
